FFCP PHASE1:Hg19::chr9:130877564..130877577,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1339|description=CAGE_peak_at_chr9:130877564..130877577,-|id=chr9:130877564..130877577,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002178;7.86e-11;3|ontology_enrichment_celltype_v019_2=CL:0002178,7.67e-11,3|ontology_enrichment_development_v019=UBERON:0006242;6.91e-09;1!UBERON:0001045;1.05e-08;1|ontology_enrichment_disease=DOID:3493!1.33e-08!2;DOID:3119!1.91e-08!14|ontology_enrichment_disease_v019=DOID:3493;2.09e-16;2!DOID:0050619;1.78e-08;1!DOID:1357;1.78e-08;1|ontology_enrichment_disease_v019_2=DOID:3493,2.01e-16,2;DOID:0050619,2.22e-08,1;DOID:1357,2.22e-08,1|ontology_enrichment_uberon=UBERON:0005409!2.19e-27!35;UBERON:0001007!2.01e-25!155;UBERON:0001555!2.01e-25!155;UBERON:0007026!2.01e-25!155;UBERON:0004921!2.60e-25!129;UBERON:0004185!2.60e-25!129;UBERON:0004119!6.69e-24!169;UBERON:0000925!6.69e-24!169;UBERON:0006595!6.69e-24!169;UBERON:0000160!9.98e-19!27;UBERON:0000077!2.44e-18!130;UBERON:0000059!3.33e-15!11;UBERON:0003929!1.16e-13!54;UBERON:0009497!1.61e-11!25;UBERON:0000015!1.61e-11!25;UBERON:0002423!1.61e-11!25;UBERON:0006235!1.61e-11!25;UBERON:0004161!1.61e-11!25;UBERON:0004907!2.68e-11!5;UBERON:0007023!6.73e-11!115;UBERON:0000481!7.43e-11!347;UBERON:0000945!1.50e-10!8;UBERON:0010039!1.50e-10!8;UBERON:0009854!2.58e-10!23;UBERON:0001046!3.76e-10!19;UBERON:0001155!4.70e-10!9;UBERON:0001041!7.37e-10!98;UBERON:0002530!3.60e-09!59;UBERON:0009856!6.19e-09!26;UBERON:0003104!8.73e-09!238;UBERON:0009142!8.73e-09!238;UBERON:0005911!9.77e-09!82;UBERON:0005057!1.34e-08!26;UBERON:0008835!1.67e-08!22;UBERON:0003894!1.67e-08!22;UBERON:0001052!3.15e-08!4;UBERON:0001829!7.78e-08!2;UBERON:0002294!7.96e-08!7;UBERON:0001173!7.96e-08!7;UBERON:0004912!7.96e-08!7;UBERON:0002368!1.79e-07!35;UBERON:0007499!2.50e-07!25;UBERON:0002365!2.78e-07!31;UBERON:0002330!2.78e-07!31|ontology_enrichment_uberon_v019=UBERON:0005409;8.45e-38;22!UBERON:0004921;3.96e-26;33!UBERON:0000160;6.09e-26;17!UBERON:0002108;2.34e-14;4!UBERON:0000945;4.68e-14;5!UBERON:0010039;4.68e-14;5!UBERON:0001155;7.28e-14;9!UBERON:0000059;2.26e-11;11!UBERON:0001555;1.06e-09;54!UBERON:0001154;1.05e-08;1!UBERON:0001153;1.05e-08;1!UBERON:0009854;1.05e-08;1!UBERON:0001041;1.21e-08;14!UBERON:0001007;1.65e-08;81!UBERON:0001764;1.78e-08;1!UBERON:0001825;1.78e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.22e-33,25;UBERON:0000160,6.29e-26,17;UBERON:0004921,8.47e-15,118;UBERON:0002108,2.23e-14,4;UBERON:0001155,7.28e-14,9;UBERON:0001007,4.40e-13,145;UBERON:0001555,4.40e-13,145;UBERON:0007026,4.40e-13,145;UBERON:0004119,1.51e-11,160;UBERON:0000925,1.51e-11,160;UBERON:0006595,1.51e-11,160;UBERON:0000059,2.26e-11,11;UBERON:0000945,5.54e-09,8;UBERON:0010039,5.54e-09,8;UBERON:0001154,1.05e-08,1;UBERON:0001153,1.05e-08,1;UBERON:0001045,1.05e-08,1;UBERON:0001764,2.22e-08,1;UBERON:0001825,2.22e-08,1;UBERON:0011216,3.27e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32230949142452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,3.32068784066407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86797481743607,3.77899121781414,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,21.8957624837271,12.9148044174875,23.8301756524114,0,0,0,0,0,0,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,6.19013684744122,0,2.16135625731159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.539228350833479,0,0,0,0,0,0,0,0,0,0,0,7.01370794962864,3.88163952198986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1339 | |||
|description=CAGE_peak_at_chr9:130877564..130877577,- | |||
|id=chr9:130877564..130877577,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;7.86e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,7.67e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.91e-09;1!UBERON:0001045;1.05e-08;1 | |||
|ontology_enrichment_disease=DOID:3493!1.33e-08!2;DOID:3119!1.91e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.09e-16;2!DOID:0050619;1.78e-08;1!DOID:1357;1.78e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.01e-16,2;DOID:0050619,2.22e-08,1;DOID:1357,2.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.19e-27!35;UBERON:0001007!2.01e-25!155;UBERON:0001555!2.01e-25!155;UBERON:0007026!2.01e-25!155;UBERON:0004921!2.60e-25!129;UBERON:0004185!2.60e-25!129;UBERON:0004119!6.69e-24!169;UBERON:0000925!6.69e-24!169;UBERON:0006595!6.69e-24!169;UBERON:0000160!9.98e-19!27;UBERON:0000077!2.44e-18!130;UBERON:0000059!3.33e-15!11;UBERON:0003929!1.16e-13!54;UBERON:0009497!1.61e-11!25;UBERON:0000015!1.61e-11!25;UBERON:0002423!1.61e-11!25;UBERON:0006235!1.61e-11!25;UBERON:0004161!1.61e-11!25;UBERON:0004907!2.68e-11!5;UBERON:0007023!6.73e-11!115;UBERON:0000481!7.43e-11!347;UBERON:0000945!1.50e-10!8;UBERON:0010039!1.50e-10!8;UBERON:0009854!2.58e-10!23;UBERON:0001046!3.76e-10!19;UBERON:0001155!4.70e-10!9;UBERON:0001041!7.37e-10!98;UBERON:0002530!3.60e-09!59;UBERON:0009856!6.19e-09!26;UBERON:0003104!8.73e-09!238;UBERON:0009142!8.73e-09!238;UBERON:0005911!9.77e-09!82;UBERON:0005057!1.34e-08!26;UBERON:0008835!1.67e-08!22;UBERON:0003894!1.67e-08!22;UBERON:0001052!3.15e-08!4;UBERON:0001829!7.78e-08!2;UBERON:0002294!7.96e-08!7;UBERON:0001173!7.96e-08!7;UBERON:0004912!7.96e-08!7;UBERON:0002368!1.79e-07!35;UBERON:0007499!2.50e-07!25;UBERON:0002365!2.78e-07!31;UBERON:0002330!2.78e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.45e-38;22!UBERON:0004921;3.96e-26;33!UBERON:0000160;6.09e-26;17!UBERON:0002108;2.34e-14;4!UBERON:0000945;4.68e-14;5!UBERON:0010039;4.68e-14;5!UBERON:0001155;7.28e-14;9!UBERON:0000059;2.26e-11;11!UBERON:0001555;1.06e-09;54!UBERON:0001154;1.05e-08;1!UBERON:0001153;1.05e-08;1!UBERON:0009854;1.05e-08;1!UBERON:0001041;1.21e-08;14!UBERON:0001007;1.65e-08;81!UBERON:0001764;1.78e-08;1!UBERON:0001825;1.78e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.22e-33,25;UBERON:0000160,6.29e-26,17;UBERON:0004921,8.47e-15,118;UBERON:0002108,2.23e-14,4;UBERON:0001155,7.28e-14,9;UBERON:0001007,4.40e-13,145;UBERON:0001555,4.40e-13,145;UBERON:0007026,4.40e-13,145;UBERON:0004119,1.51e-11,160;UBERON:0000925,1.51e-11,160;UBERON:0006595,1.51e-11,160;UBERON:0000059,2.26e-11,11;UBERON:0000945,5.54e-09,8;UBERON:0010039,5.54e-09,8;UBERON:0001154,1.05e-08,1;UBERON:0001153,1.05e-08,1;UBERON:0001045,1.05e-08,1;UBERON:0001764,2.22e-08,1;UBERON:0001825,2.22e-08,1;UBERON:0011216,3.27e-07,223 | |||
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|short_description=p@chr9:130877564..130877577,- | |||
}} |
Revision as of 07:37, 14 September 2013
Short description: | p@chr9:130877564..130877577, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:130877564..130877577, - |
Coexpression cluster: | C1339_small_colon_signet_trachea_gall_adenocarcinoma_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 7.67e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.22e-33 | 25 |
intestine | 6.29e-26 | 17 |
subdivision of digestive tract | 8.47e-15 | 118 |
small intestine | 2.23e-14 | 4 |
colon | 7.28e-14 | 9 |
digestive system | 4.40e-13 | 145 |
digestive tract | 4.40e-13 | 145 |
primitive gut | 4.40e-13 | 145 |
endoderm-derived structure | 1.51e-11 | 160 |
endoderm | 1.51e-11 | 160 |
presumptive endoderm | 1.51e-11 | 160 |
large intestine | 2.26e-11 | 11 |
stomach | 5.54e-09 | 8 |
food storage organ | 5.54e-09 | 8 |
vermiform appendix | 1.05e-08 | 1 |
caecum | 1.05e-08 | 1 |
midgut | 1.05e-08 | 1 |
maxillary sinus | 2.22e-08 | 1 |
paranasal sinus | 2.22e-08 | 1 |
organ system subdivision | 3.27e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.01e-16 | 2 |
paranasal sinus cancer | 2.22e-08 | 1 |
maxillary sinus cancer | 2.22e-08 | 1 |
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