FFCP PHASE1:Mm9::chr5:35260167..35260194,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=459|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:35260167..35260194,+|id=chr5:35260167..35260194,+|ontology_enrichment_celltype=CL:0000117!5.05e-19!23;CL:0000337!5.05e-19!23;CL:0000540!1.25e-11!33;CL:0000047!1.25e-11!33;CL:0000031!1.25e-11!33;CL:0000404!1.25e-11!33;CL:0000393!1.26e-08!39;CL:0000211!1.26e-08!39;CL:0002319!2.38e-08!43;CL:0000221!5.56e-08!44;CL:0000133!5.56e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-28,23;CL:0000337,1.67e-28,23;CL:0000540,8.32e-19,33;CL:0000047,8.32e-19,33;CL:0000031,8.32e-19,33;CL:0000404,8.32e-19,33;CL:0000393,2.23e-15,39;CL:0000211,2.23e-15,39;CL:0002319,1.26e-13,43;CL:0000221,3.09e-13,44;CL:0000133,3.09e-13,44;CL:0002608,7.62e-10,3;CL:0002613,1.14e-09,3;CL:0002321,4.59e-07,70;CL:0002611,9.82e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.28e-28!52;UBERON:0005068!9.28e-28!52;UBERON:0006241!9.28e-28!52;UBERON:0007135!9.28e-28!52;UBERON:0000033!7.98e-27!63;UBERON:0003056!5.86e-26!49;UBERON:0002346!6.23e-26!71;UBERON:0003075!6.23e-26!71;UBERON:0007284!6.23e-26!71;UBERON:0000955!8.00e-26!50;UBERON:0006238!8.00e-26!50;UBERON:0002020!9.23e-26!34;UBERON:0000073!1.88e-25!75;UBERON:0001016!1.88e-25!75;UBERON:0002616!4.83e-25!49;UBERON:0001017!8.95e-25!73;UBERON:0005743!8.95e-25!73;UBERON:0003080!2.25e-23!40;UBERON:0004121!1.28e-22!102;UBERON:0000924!1.28e-22!102;UBERON:0006601!1.28e-22!102;UBERON:0002780!1.55e-22!39;UBERON:0001890!1.55e-22!39;UBERON:0006240!1.55e-22!39;UBERON:0002791!5.15e-21!29;UBERON:0003528!5.15e-21!29;UBERON:0001893!5.15e-21!29;UBERON:0007811!9.96e-16!86;UBERON:0000956!2.02e-13!21;UBERON:0001869!2.02e-13!21;UBERON:0000203!2.02e-13!21;UBERON:0000153!5.45e-13!94;UBERON:0002619!1.12e-12!17;UBERON:0002021!2.38e-10!10;UBERON:0000411!2.38e-10!10;UBERON:0001950!2.38e-10!10;UBERON:0002420!5.34e-09!8;UBERON:0007245!5.34e-09!8;UBERON:0010009!5.34e-09!8;UBERON:0010011!5.34e-09!8;UBERON:0000454!5.34e-09!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.96e-41,34;UBERON:0000073,7.95e-34,54;UBERON:0003528,1.76e-32,29;UBERON:0002791,1.76e-32,29;UBERON:0001893,1.76e-32,29;UBERON:0001049,3.94e-30,52;UBERON:0005068,3.94e-30,52;UBERON:0006241,3.94e-30,52;UBERON:0007135,3.94e-30,52;UBERON:0002780,1.19e-28,39;UBERON:0001890,1.19e-28,39;UBERON:0006240,1.19e-28,39;UBERON:0001017,7.23e-28,73;UBERON:0003080,8.07e-28,40;UBERON:0001016,5.63e-27,75;UBERON:0002346,1.30e-25,64;UBERON:0003075,1.30e-25,64;UBERON:0007284,1.30e-25,64;UBERON:0003056,3.88e-24,49;UBERON:0002616,1.36e-23,46;UBERON:0000955,5.40e-23,47;UBERON:0006238,5.40e-23,47;UBERON:0002619,1.80e-22,17;UBERON:0010371,8.50e-22,73;UBERON:0004121,8.72e-22,95;UBERON:0000924,8.72e-22,95;UBERON:0006601,8.72e-22,95;UBERON:0000956,1.03e-17,21;UBERON:0001869,1.03e-17,21;UBERON:0000203,1.03e-17,21;UBERON:0002420,3.98e-17,8;UBERON:0007245,3.98e-17,8;UBERON:0010009,3.98e-17,8;UBERON:0010011,3.98e-17,8;UBERON:0000454,3.98e-17,8;UBERON:0010314,3.46e-16,92;UBERON:0000369,5.23e-15,5;UBERON:0002435,5.23e-15,5;UBERON:0000204,5.23e-15,5;UBERON:0010082,5.23e-15,5;UBERON:0002021,1.17e-13,10;UBERON:0000411,1.17e-13,10;UBERON:0001950,1.17e-13,10;UBERON:0000025,6.84e-11,114;UBERON:0001954,3.60e-10,7;UBERON:0003022,3.60e-10,7;UBERON:0002421,3.60e-10,7;UBERON:0000349,3.60e-10,7;UBERON:0002600,3.60e-10,7;UBERON:0004111,7.87e-10,122;UBERON:0001948,1.80e-09,5;UBERON:0002315,1.80e-09,5;UBERON:0002240,6.75e-08,6;UBERON:0005174,6.75e-08,6;UBERON:0001137,6.75e-08,6;UBERON:0011216,6.79e-07,194;UBERON:0002256,9.82e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0,0.405017814995072,0.210324961351382,3.14216082844184,1.32521124570968,2.44981598429908,3.35459148563827,2.75765635983006,1.10115880999389,0.383062014255563,1.0752457327937,1.31886287730194,3.84248103130121,4.16730696445408,0.837548997004143,1.68828783009504,1.22238598221448,2.06240009831567,1.70846016958924,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.898743836428936,1.37250180845588,8.04187853522332,0.695297280769106,2.55715457330331,1.87009240103604,1.62241263067758,0,0,0,0.210441855886474,0.130120442962704,0,1.26043490863744,0.60281927134286,0.816437989815934,0.384341160854549,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.64647379806855,0,0,0.426576501070468,0,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.60325236507177,1.71868654031819,2.92150409984269,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,2.07104124700728,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.735994600671987,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0|short_description=p@chr5:35260167..35260194,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=459 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:35260167..35260194,+ | |||
|id=chr5:35260167..35260194,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.05e-19!23;CL:0000337!5.05e-19!23;CL:0000540!1.25e-11!33;CL:0000047!1.25e-11!33;CL:0000031!1.25e-11!33;CL:0000404!1.25e-11!33;CL:0000393!1.26e-08!39;CL:0000211!1.26e-08!39;CL:0002319!2.38e-08!43;CL:0000221!5.56e-08!44;CL:0000133!5.56e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-28,23;CL:0000337,1.67e-28,23;CL:0000540,8.32e-19,33;CL:0000047,8.32e-19,33;CL:0000031,8.32e-19,33;CL:0000404,8.32e-19,33;CL:0000393,2.23e-15,39;CL:0000211,2.23e-15,39;CL:0002319,1.26e-13,43;CL:0000221,3.09e-13,44;CL:0000133,3.09e-13,44;CL:0002608,7.62e-10,3;CL:0002613,1.14e-09,3;CL:0002321,4.59e-07,70;CL:0002611,9.82e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.28e-28!52;UBERON:0005068!9.28e-28!52;UBERON:0006241!9.28e-28!52;UBERON:0007135!9.28e-28!52;UBERON:0000033!7.98e-27!63;UBERON:0003056!5.86e-26!49;UBERON:0002346!6.23e-26!71;UBERON:0003075!6.23e-26!71;UBERON:0007284!6.23e-26!71;UBERON:0000955!8.00e-26!50;UBERON:0006238!8.00e-26!50;UBERON:0002020!9.23e-26!34;UBERON:0000073!1.88e-25!75;UBERON:0001016!1.88e-25!75;UBERON:0002616!4.83e-25!49;UBERON:0001017!8.95e-25!73;UBERON:0005743!8.95e-25!73;UBERON:0003080!2.25e-23!40;UBERON:0004121!1.28e-22!102;UBERON:0000924!1.28e-22!102;UBERON:0006601!1.28e-22!102;UBERON:0002780!1.55e-22!39;UBERON:0001890!1.55e-22!39;UBERON:0006240!1.55e-22!39;UBERON:0002791!5.15e-21!29;UBERON:0003528!5.15e-21!29;UBERON:0001893!5.15e-21!29;UBERON:0007811!9.96e-16!86;UBERON:0000956!2.02e-13!21;UBERON:0001869!2.02e-13!21;UBERON:0000203!2.02e-13!21;UBERON:0000153!5.45e-13!94;UBERON:0002619!1.12e-12!17;UBERON:0002021!2.38e-10!10;UBERON:0000411!2.38e-10!10;UBERON:0001950!2.38e-10!10;UBERON:0002420!5.34e-09!8;UBERON:0007245!5.34e-09!8;UBERON:0010009!5.34e-09!8;UBERON:0010011!5.34e-09!8;UBERON:0000454!5.34e-09!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.96e-41,34;UBERON:0000073,7.95e-34,54;UBERON:0003528,1.76e-32,29;UBERON:0002791,1.76e-32,29;UBERON:0001893,1.76e-32,29;UBERON:0001049,3.94e-30,52;UBERON:0005068,3.94e-30,52;UBERON:0006241,3.94e-30,52;UBERON:0007135,3.94e-30,52;UBERON:0002780,1.19e-28,39;UBERON:0001890,1.19e-28,39;UBERON:0006240,1.19e-28,39;UBERON:0001017,7.23e-28,73;UBERON:0003080,8.07e-28,40;UBERON:0001016,5.63e-27,75;UBERON:0002346,1.30e-25,64;UBERON:0003075,1.30e-25,64;UBERON:0007284,1.30e-25,64;UBERON:0003056,3.88e-24,49;UBERON:0002616,1.36e-23,46;UBERON:0000955,5.40e-23,47;UBERON:0006238,5.40e-23,47;UBERON:0002619,1.80e-22,17;UBERON:0010371,8.50e-22,73;UBERON:0004121,8.72e-22,95;UBERON:0000924,8.72e-22,95;UBERON:0006601,8.72e-22,95;UBERON:0000956,1.03e-17,21;UBERON:0001869,1.03e-17,21;UBERON:0000203,1.03e-17,21;UBERON:0002420,3.98e-17,8;UBERON:0007245,3.98e-17,8;UBERON:0010009,3.98e-17,8;UBERON:0010011,3.98e-17,8;UBERON:0000454,3.98e-17,8;UBERON:0010314,3.46e-16,92;UBERON:0000369,5.23e-15,5;UBERON:0002435,5.23e-15,5;UBERON:0000204,5.23e-15,5;UBERON:0010082,5.23e-15,5;UBERON:0002021,1.17e-13,10;UBERON:0000411,1.17e-13,10;UBERON:0001950,1.17e-13,10;UBERON:0000025,6.84e-11,114;UBERON:0001954,3.60e-10,7;UBERON:0003022,3.60e-10,7;UBERON:0002421,3.60e-10,7;UBERON:0000349,3.60e-10,7;UBERON:0002600,3.60e-10,7;UBERON:0004111,7.87e-10,122;UBERON:0001948,1.80e-09,5;UBERON:0002315,1.80e-09,5;UBERON:0002240,6.75e-08,6;UBERON:0005174,6.75e-08,6;UBERON:0001137,6.75e-08,6;UBERON:0011216,6.79e-07,194;UBERON:0002256,9.82e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0,0.405017814995072,0.210324961351382,3.14216082844184,1.32521124570968,2.44981598429908,3.35459148563827,2.75765635983006,1.10115880999389,0.383062014255563,1.0752457327937,1.31886287730194,3.84248103130121,4.16730696445408,0.837548997004143,1.68828783009504,1.22238598221448,2.06240009831567,1.70846016958924,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.898743836428936,1.37250180845588,8.04187853522332,0.695297280769106,2.55715457330331,1.87009240103604,1.62241263067758,0,0,0,0.210441855886474,0.130120442962704,0,1.26043490863744,0.60281927134286,0.816437989815934,0.384341160854549,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.64647379806855,0,0,0.426576501070468,0,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.60325236507177,1.71868654031819,2.92150409984269,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,2.07104124700728,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.735994600671987,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr5:35260167..35260194,+ | |||
}} |
Revision as of 07:32, 14 September 2013
Short description: | p@chr5:35260167..35260194, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:35260167..35260194, + |
Coexpression cluster: | MCL_coexpression_mm9:459 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.67e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-28 | 23 |
neuron | 8.32e-19 | 33 |
neuronal stem cell | 8.32e-19 | 33 |
neuroblast | 8.32e-19 | 33 |
electrically signaling cell | 8.32e-19 | 33 |
electrically responsive cell | 2.23e-15 | 39 |
electrically active cell | 2.23e-15 | 39 |
neural cell | 1.26e-13 | 43 |
ectodermal cell | 3.09e-13 | 44 |
neurectodermal cell | 3.09e-13 | 44 |
hippocampal neuron | 7.62e-10 | 3 |
striatum neuron | 1.14e-09 | 3 |
embryonic cell | 4.59e-07 | 70 |
neuron of the dorsal spinal cord | 9.82e-07 | 2 |
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