FFCP PHASE1:Mm9::chr5:115885491..115885507,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17690|HGNC=|MCL_coexpression_id=573|UniProt=|association_with_transcript=0bp_to_ENSMUST00000130849_5end|description=CAGE_peak_7_at_Msi1_5end|id=chr5:115885491..115885507,+|ontology_enrichment_celltype=CL:0000221!1.24e-15!44;CL:0000133!1.24e-15!44;CL:0002319!4.70e-15!43;CL:0000117!2.87e-13!23;CL:0000337!2.87e-13!23;CL:0000540!5.04e-13!33;CL:0000047!5.04e-13!33;CL:0000031!5.04e-13!33;CL:0000404!5.04e-13!33;CL:0000055!1.13e-10!50;CL:0000393!4.75e-09!39;CL:0000211!4.75e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.77e-26,23;CL:0000337,2.77e-26,23;CL:0000221,1.14e-25,44;CL:0000133,1.14e-25,44;CL:0002319,2.28e-24,43;CL:0000540,1.14e-18,33;CL:0000047,1.14e-18,33;CL:0000031,1.14e-18,33;CL:0000404,1.14e-18,33;CL:0000393,5.48e-15,39;CL:0000211,5.48e-15,39;CL:0002321,1.62e-13,70;CL:0002609,1.42e-12,6;CL:0002453,2.39e-08,8;CL:0000120,4.68e-07,3;CL:0002608,5.61e-07,3;CL:0002613,8.78e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.98e-21!102;UBERON:0000924!1.98e-21!102;UBERON:0006601!1.98e-21!102;UBERON:0001017!2.09e-20!73;UBERON:0005743!2.09e-20!73;UBERON:0002346!6.47e-20!71;UBERON:0003075!6.47e-20!71;UBERON:0007284!6.47e-20!71;UBERON:0000073!3.76e-19!75;UBERON:0001016!3.76e-19!75;UBERON:0000033!5.44e-17!63;UBERON:0003056!1.20e-16!49;UBERON:0001049!7.52e-14!52;UBERON:0005068!7.52e-14!52;UBERON:0006241!7.52e-14!52;UBERON:0007135!7.52e-14!52;UBERON:0000955!5.93e-12!50;UBERON:0006238!5.93e-12!50;UBERON:0002616!8.69e-12!49;UBERON:0002780!2.02e-11!39;UBERON:0001890!2.02e-11!39;UBERON:0006240!2.02e-11!39;UBERON:0003080!8.59e-11!40;UBERON:0002020!2.71e-10!34;UBERON:0000153!2.07e-08!94;UBERON:0007811!5.14e-08!86;UBERON:0002791!9.50e-08!29;UBERON:0003528!9.50e-08!29;UBERON:0001893!9.50e-08!29;UBERON:0000970!1.01e-07!9;UBERON:0000019!1.01e-07!9;UBERON:0000047!1.01e-07!9;UBERON:0004088!1.01e-07!9;UBERON:0002104!1.01e-07!9;UBERON:0001456!1.01e-07!9;UBERON:0003072!1.01e-07!9;UBERON:0003071!1.01e-07!9;UBERON:0004128!1.01e-07!9;UBERON:0000020!8.02e-07!12;UBERON:0001032!8.02e-07!12;UBERON:0004456!8.02e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.26e-27,95;UBERON:0000924,1.26e-27,95;UBERON:0006601,1.26e-27,95;UBERON:0002346,3.45e-24,64;UBERON:0003075,3.45e-24,64;UBERON:0007284,3.45e-24,64;UBERON:0003056,1.11e-21,49;UBERON:0010371,1.12e-21,73;UBERON:0001017,7.20e-21,73;UBERON:0001016,4.33e-20,75;UBERON:0000073,6.82e-16,54;UBERON:0002020,8.97e-16,34;UBERON:0010314,1.83e-15,92;UBERON:0001049,2.39e-15,52;UBERON:0005068,2.39e-15,52;UBERON:0006241,2.39e-15,52;UBERON:0007135,2.39e-15,52;UBERON:0000970,3.11e-14,9;UBERON:0000019,3.11e-14,9;UBERON:0000047,3.11e-14,9;UBERON:0010312,3.11e-14,9;UBERON:0004088,3.11e-14,9;UBERON:0002104,3.11e-14,9;UBERON:0001456,3.11e-14,9;UBERON:0003072,3.11e-14,9;UBERON:0004128,3.11e-14,9;UBERON:0003071,3.11e-14,9;UBERON:0000020,1.13e-12,12;UBERON:0001032,1.13e-12,12;UBERON:0004456,1.13e-12,12;UBERON:0002780,5.41e-12,39;UBERON:0001890,5.41e-12,39;UBERON:0006240,5.41e-12,39;UBERON:0003080,1.40e-11,40;UBERON:0000033,1.53e-11,13;UBERON:0005085,1.53e-11,13;UBERON:0001444,2.45e-11,11;UBERON:0002616,6.82e-11,46;UBERON:0000955,1.47e-10,47;UBERON:0006238,1.47e-10,47;UBERON:0003528,2.42e-10,29;UBERON:0002791,2.42e-10,29;UBERON:0001893,2.42e-10,29;UBERON:0001948,2.86e-08,5;UBERON:0002315,2.86e-08,5;UBERON:0000956,1.23e-07,21;UBERON:0001869,1.23e-07,21;UBERON:0000203,1.23e-07,21;UBERON:0002240,7.73e-07,6;UBERON:0005174,7.73e-07,6;UBERON:0001137,7.73e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0.86152399231815,0,0,0.252030129759931,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,4.57852828398938,0.659058548203415,2.72201858703997,1.53985063787899,1.43752564364972,0,0,0,0,0,0,3.23706337375356,6.34789175126439,2.53532561402472,0.338844532069132,0,0,0,0,1.19840044207362,5.37905627450176,2.7996195323289,7.42532660824299,3.36519938162211,1.14260393761521,1.10434270475807,1.95985278743926,4.31304619582064,3.67687514644008,1.10115880999389,0.638436690425939,0.153606533256243,2.2420668914133,3.65950574409639,2.6045668527838,1.3959149950069,0,0.61119299110724,1.17851434189467,1.56608848879013,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,1.26759077799012,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.879580464790051,0,0,0.83115217823824,0.162241263067758,0.203678727700633,0,0,0.631325567659422,1.82168620147785,2.75882525320168,3.78130472591233,2.26057226753573,4.96666443804693,6.14945857367279,7.30873451565885,3.62184719034622,0.862271971731369,0.378212160335639,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0.23253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| ||
|EntrezGene=17690 | |||
|HGNC= | |||
|MCL_coexpression_id=573 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000130849_5end | |||
|description=CAGE_peak_7_at_Msi1_5end | |||
|id=chr5:115885491..115885507,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.24e-15!44;CL:0000133!1.24e-15!44;CL:0002319!4.70e-15!43;CL:0000117!2.87e-13!23;CL:0000337!2.87e-13!23;CL:0000540!5.04e-13!33;CL:0000047!5.04e-13!33;CL:0000031!5.04e-13!33;CL:0000404!5.04e-13!33;CL:0000055!1.13e-10!50;CL:0000393!4.75e-09!39;CL:0000211!4.75e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.77e-26,23;CL:0000337,2.77e-26,23;CL:0000221,1.14e-25,44;CL:0000133,1.14e-25,44;CL:0002319,2.28e-24,43;CL:0000540,1.14e-18,33;CL:0000047,1.14e-18,33;CL:0000031,1.14e-18,33;CL:0000404,1.14e-18,33;CL:0000393,5.48e-15,39;CL:0000211,5.48e-15,39;CL:0002321,1.62e-13,70;CL:0002609,1.42e-12,6;CL:0002453,2.39e-08,8;CL:0000120,4.68e-07,3;CL:0002608,5.61e-07,3;CL:0002613,8.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.98e-21!102;UBERON:0000924!1.98e-21!102;UBERON:0006601!1.98e-21!102;UBERON:0001017!2.09e-20!73;UBERON:0005743!2.09e-20!73;UBERON:0002346!6.47e-20!71;UBERON:0003075!6.47e-20!71;UBERON:0007284!6.47e-20!71;UBERON:0000073!3.76e-19!75;UBERON:0001016!3.76e-19!75;UBERON:0000033!5.44e-17!63;UBERON:0003056!1.20e-16!49;UBERON:0001049!7.52e-14!52;UBERON:0005068!7.52e-14!52;UBERON:0006241!7.52e-14!52;UBERON:0007135!7.52e-14!52;UBERON:0000955!5.93e-12!50;UBERON:0006238!5.93e-12!50;UBERON:0002616!8.69e-12!49;UBERON:0002780!2.02e-11!39;UBERON:0001890!2.02e-11!39;UBERON:0006240!2.02e-11!39;UBERON:0003080!8.59e-11!40;UBERON:0002020!2.71e-10!34;UBERON:0000153!2.07e-08!94;UBERON:0007811!5.14e-08!86;UBERON:0002791!9.50e-08!29;UBERON:0003528!9.50e-08!29;UBERON:0001893!9.50e-08!29;UBERON:0000970!1.01e-07!9;UBERON:0000019!1.01e-07!9;UBERON:0000047!1.01e-07!9;UBERON:0004088!1.01e-07!9;UBERON:0002104!1.01e-07!9;UBERON:0001456!1.01e-07!9;UBERON:0003072!1.01e-07!9;UBERON:0003071!1.01e-07!9;UBERON:0004128!1.01e-07!9;UBERON:0000020!8.02e-07!12;UBERON:0001032!8.02e-07!12;UBERON:0004456!8.02e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.26e-27,95;UBERON:0000924,1.26e-27,95;UBERON:0006601,1.26e-27,95;UBERON:0002346,3.45e-24,64;UBERON:0003075,3.45e-24,64;UBERON:0007284,3.45e-24,64;UBERON:0003056,1.11e-21,49;UBERON:0010371,1.12e-21,73;UBERON:0001017,7.20e-21,73;UBERON:0001016,4.33e-20,75;UBERON:0000073,6.82e-16,54;UBERON:0002020,8.97e-16,34;UBERON:0010314,1.83e-15,92;UBERON:0001049,2.39e-15,52;UBERON:0005068,2.39e-15,52;UBERON:0006241,2.39e-15,52;UBERON:0007135,2.39e-15,52;UBERON:0000970,3.11e-14,9;UBERON:0000019,3.11e-14,9;UBERON:0000047,3.11e-14,9;UBERON:0010312,3.11e-14,9;UBERON:0004088,3.11e-14,9;UBERON:0002104,3.11e-14,9;UBERON:0001456,3.11e-14,9;UBERON:0003072,3.11e-14,9;UBERON:0004128,3.11e-14,9;UBERON:0003071,3.11e-14,9;UBERON:0000020,1.13e-12,12;UBERON:0001032,1.13e-12,12;UBERON:0004456,1.13e-12,12;UBERON:0002780,5.41e-12,39;UBERON:0001890,5.41e-12,39;UBERON:0006240,5.41e-12,39;UBERON:0003080,1.40e-11,40;UBERON:0000033,1.53e-11,13;UBERON:0005085,1.53e-11,13;UBERON:0001444,2.45e-11,11;UBERON:0002616,6.82e-11,46;UBERON:0000955,1.47e-10,47;UBERON:0006238,1.47e-10,47;UBERON:0003528,2.42e-10,29;UBERON:0002791,2.42e-10,29;UBERON:0001893,2.42e-10,29;UBERON:0001948,2.86e-08,5;UBERON:0002315,2.86e-08,5;UBERON:0000956,1.23e-07,21;UBERON:0001869,1.23e-07,21;UBERON:0000203,1.23e-07,21;UBERON:0002240,7.73e-07,6;UBERON:0005174,7.73e-07,6;UBERON:0001137,7.73e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0.86152399231815,0,0,0.252030129759931,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,4.57852828398938,0.659058548203415,2.72201858703997,1.53985063787899,1.43752564364972,0,0,0,0,0,0,3.23706337375356,6.34789175126439,2.53532561402472,0.338844532069132,0,0,0,0,1.19840044207362,5.37905627450176,2.7996195323289,7.42532660824299,3.36519938162211,1.14260393761521,1.10434270475807,1.95985278743926,4.31304619582064,3.67687514644008,1.10115880999389,0.638436690425939,0.153606533256243,2.2420668914133,3.65950574409639,2.6045668527838,1.3959149950069,0,0.61119299110724,1.17851434189467,1.56608848879013,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,1.26759077799012,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.879580464790051,0,0,0.83115217823824,0.162241263067758,0.203678727700633,0,0,0.631325567659422,1.82168620147785,2.75882525320168,3.78130472591233,2.26057226753573,4.96666443804693,6.14945857367279,7.30873451565885,3.62184719034622,0.862271971731369,0.378212160335639,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0.92614151141356,0,0,0.426576501070468,0.464473343720877,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0.199141273254367,0.758671603812327,0.228497025219458,1.1270773567308,0,0.387904974335251,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,0.566153061577665,1.21443210502468,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,1.62054984628179,1.55230420539305,1.71469628025274,0.354680467284547,1.42695054081656,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0.477489376012546,0.492422699235184,0,0.370850604021019,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.540026704109006,0,0,0,0,0,0.388844919875379,0,1.12738587736838,0.747582730219894,0,0.388902376688095,0.516639293910924,1.01373675294467,0.821500670520278,0.781226309063701,1.04859344425711,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0.221985953374065,0,0,0.19318959403219,0,0,0.214368379079066,0,1.12950368523413,0.920650473014354,1.71868654031819,0.343706364687375,0,0,1.35004500046361,0.900642406448441,0,0,1.86817225651518,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0,0.824140228955577,0.962757628775446,0,0.25347929989024,0,0.37456602987953,0.256100609619477,0.516919220600519,0.476293691283074,0.811190281613988,0.38581844092741,0,0.294397840268795,1.37147700954166,0.887379030796687,0,0.145346416632329,0.658765662907314,0.592302255241736,0.182927972872773,0.263069711437843,0.543216455383447,0,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0,1.24905288968973,0,0.214871054048298,0,0,0 | |||
|short_description=p7@Msi1 | |||
}} |
Revision as of 06:06, 14 September 2013
Short description: | p7@Msi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Msi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:573 |
Association with transcript: | 0bp_to_ENSMUST00000130849_5end |
EntrezGene: | Msi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.77e-26 | 23 |
neuroblast (sensu Vertebrata) | 2.77e-26 | 23 |
ectodermal cell | 1.14e-25 | 44 |
neurectodermal cell | 1.14e-25 | 44 |
neural cell | 2.28e-24 | 43 |
neuron | 1.14e-18 | 33 |
neuronal stem cell | 1.14e-18 | 33 |
neuroblast | 1.14e-18 | 33 |
electrically signaling cell | 1.14e-18 | 33 |
electrically responsive cell | 5.48e-15 | 39 |
electrically active cell | 5.48e-15 | 39 |
embryonic cell | 1.62e-13 | 70 |
neuron of cerebral cortex | 1.42e-12 | 6 |
oligodendrocyte precursor cell | 2.39e-08 | 8 |
granule cell | 4.68e-07 | 3 |
hippocampal neuron | 5.61e-07 | 3 |
striatum neuron | 8.78e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.