FFCP PHASE1:Hg19::chr8:67039452..67039469,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84675|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14215|TSSclassifier=W|UniProt=Q9BYV6|association_with_transcript=174bp_to_ENST00000276573,ENST00000350034,NM_033058,NM_184085,NM_184086,NM_184087,uc003xvu.2,uc003xvv.2,uc003xvw.2,uc003xvx.2_5end|coexpression_cluster_id=C56|description=CAGE_peak_2_at_TRIM55_5end|id=chr8:67039452..67039469,+|ontology_enrichment_celltype=CL:0000515!2.00e-10!4;CL:0000188!1.67e-08!9|ontology_enrichment_celltype_v019=CL:0000056;3.65e-21;4!CL:0000515;1.74e-16;3!CL:0000680;3.59e-12;7|ontology_enrichment_celltype_v019_2=CL:0000515,4.76e-21,4|ontology_enrichment_development_v019=CL:0000515;3.65e-21;4!UBERON:0003104;1.91e-09;31!UBERON:0004140;4.09e-07;1!UBERON:0010226;4.58e-07;1!UBERON:0010227;4.85e-07;1|ontology_enrichment_disease=DOID:17!1.61e-07!5;DOID:450!1.61e-07!5;DOID:66!1.61e-07!5;DOID:423!1.61e-07!5;DOID:0080000!1.61e-07!5;DOID:11722!1.61e-07!5|ontology_enrichment_disease_v019=DOID:114;1.58e-11;2|ontology_enrichment_disease_v019_2=DOID:114,1.31e-11,2|ontology_enrichment_uberon=UBERON:0003103!5.43e-15!69;UBERON:0007100!8.30e-11!27;UBERON:0004151!1.67e-08!3;UBERON:0003978!1.75e-08!3;UBERON:0009751!1.75e-08!3;UBERON:0000946!1.75e-08!3;UBERON:0002523!1.75e-08!3;UBERON:0005983!1.75e-08!3;UBERON:0002165!1.75e-08!3;UBERON:0002062!1.75e-08!3;UBERON:0007280!1.75e-08!3;UBERON:0001723!5.30e-08!3;UBERON:0001033!5.30e-08!3;UBERON:0010056!5.30e-08!3;UBERON:0007023!7.76e-07!115;UBERON:0000948!8.19e-07!24;UBERON:0005498!8.19e-07!24;UBERON:0004140!8.19e-07!24;UBERON:0009881!8.19e-07!24;UBERON:0004141!8.19e-07!24;UBERON:0003084!8.19e-07!24;UBERON:0007005!8.19e-07!24;UBERON:0004139!8.19e-07!24;UBERON:0004291!8.19e-07!24|ontology_enrichment_uberon_v019=UBERON:0001134;1.15e-25;16!UBERON:0002036;1.15e-25;16!UBERON:0007100;2.70e-16;25!UBERON:0002385;1.99e-12;31!UBERON:0001015;1.99e-12;31!UBERON:0000383;1.99e-12;31!UBERON:0005090;5.21e-12;2!UBERON:0001630;5.21e-12;2!UBERON:0000341;7.63e-12;2!UBERON:0000948;1.36e-08;22!UBERON:0004151;1.43e-08;3!UBERON:0003978;1.54e-08;3!UBERON:0000946;1.54e-08;3!UBERON:0001723;2.31e-08;3!UBERON:0001033;2.31e-08;3!UBERON:0002135;4.33e-07;1!UBERON:0002084;4.58e-07;1!UBERON:0002082;4.58e-07;1!UBERON:0002079;4.85e-07;1!UBERON:0002146;5.74e-07;1!UBERON:0005623;5.74e-07;1!UBERON:0001389;6.07e-07;1!UBERON:0000026;6.07e-07;1!UBERON:0008784;6.07e-07;1!UBERON:0006058;6.07e-07;1!UBERON:0003663;6.07e-07;1!UBERON:0004256;6.07e-07;1!UBERON:0004708;6.07e-07;1!UBERON:0002101;6.07e-07;1!UBERON:0004709;6.07e-07;1!UBERON:0002529;6.07e-07;1!UBERON:0010538;6.07e-07;1!UBERON:0003661;6.07e-07;1!UBERON:0010890;6.07e-07;1!UBERON:0002471;6.07e-07;1!UBERON:0001383;6.07e-07;1!UBERON:0010758;6.07e-07;1!UBERON:0010707;6.07e-07;1!UBERON:0000978;6.07e-07;1!UBERON:0002103;6.07e-07;1!UBERON:0001665;6.07e-07;1!UBERON:0003823;6.07e-07;1!UBERON:0000154;6.07e-07;1!UBERON:0010709;6.07e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.65e-15,27;UBERON:0003103,1.22e-12,68;UBERON:0005090,5.22e-12,2;UBERON:0001630,5.22e-12,2;UBERON:0000341,7.23e-12,2;UBERON:0004151,1.44e-08,3;UBERON:0003978,1.54e-08,3;UBERON:0009751,1.54e-08,3;UBERON:0000946,1.54e-08,3;UBERON:0002523,1.54e-08,3;UBERON:0005983,1.54e-08,3;UBERON:0002165,1.54e-08,3;UBERON:0002062,1.54e-08,3;UBERON:0007280,1.54e-08,3;UBERON:0001723,2.22e-08,3;UBERON:0001033,2.22e-08,3;UBERON:0010056,2.22e-08,3;UBERON:0000948,8.36e-08,24;UBERON:0005498,8.36e-08,24;UBERON:0004140,8.36e-08,24;UBERON:0009881,8.36e-08,24;UBERON:0004141,8.36e-08,24;UBERON:0003084,8.36e-08,24;UBERON:0007005,8.36e-08,24;UBERON:0004139,8.36e-08,24;UBERON:0004291,8.36e-08,24;UBERON:0002135,4.33e-07,1;UBERON:0002084,4.58e-07,1;UBERON:0002082,4.58e-07,1;UBERON:0010226,4.58e-07,1;UBERON:0002079,4.85e-07,1;UBERON:0002146,5.75e-07,1;UBERON:0005623,5.75e-07,1;UBERON:0005418,6.08e-07,1;UBERON:0001389,6.08e-07,1;UBERON:0000026,6.08e-07,1;UBERON:0008784,6.08e-07,1;UBERON:0006058,6.08e-07,1;UBERON:0003663,6.08e-07,1;UBERON:0004256,6.08e-07,1;UBERON:0004708,6.08e-07,1;UBERON:0002101,6.08e-07,1;UBERON:0004709,6.08e-07,1;UBERON:0002529,6.08e-07,1;UBERON:0010538,6.08e-07,1;UBERON:0003661,6.08e-07,1;UBERON:0010890,6.08e-07,1;UBERON:0002471,6.08e-07,1;UBERON:0001383,6.08e-07,1;UBERON:0004357,6.08e-07,1;UBERON:0004347,6.08e-07,1;UBERON:0005420,6.08e-07,1;UBERON:0005732,6.08e-07,1;UBERON:0010758,6.08e-07,1;UBERON:0010707,6.08e-07,1;UBERON:0000978,6.08e-07,1;UBERON:0002103,6.08e-07,1;UBERON:0001665,6.08e-07,1;UBERON:0003823,6.08e-07,1;UBERON:0000154,6.08e-07,1;UBERON:0010709,6.08e-07,1;UBERON:0005733,6.08e-07,1;UBERON:0005730,6.08e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14215 | |||
|TSSclassifier=W | |||
|UniProt=Q9BYV6 | |||
|association_with_transcript=174bp_to_ENST00000276573,ENST00000350034,NM_033058,NM_184085,NM_184086,NM_184087,uc003xvu.2,uc003xvv.2,uc003xvw.2,uc003xvx.2_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_2_at_TRIM55_5end | |||
|id=chr8:67039452..67039469,+ | |||
|ontology_enrichment_celltype=CL:0000515!2.00e-10!4;CL:0000188!1.67e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000056;3.65e-21;4!CL:0000515;1.74e-16;3!CL:0000680;3.59e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,4.76e-21,4 | |||
|ontology_enrichment_development_v019=CL:0000515;3.65e-21;4!UBERON:0003104;1.91e-09;31!UBERON:0004140;4.09e-07;1!UBERON:0010226;4.58e-07;1!UBERON:0010227;4.85e-07;1 | |||
|ontology_enrichment_disease=DOID:17!1.61e-07!5;DOID:450!1.61e-07!5;DOID:66!1.61e-07!5;DOID:423!1.61e-07!5;DOID:0080000!1.61e-07!5;DOID:11722!1.61e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:114;1.58e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.31e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0003103!5.43e-15!69;UBERON:0007100!8.30e-11!27;UBERON:0004151!1.67e-08!3;UBERON:0003978!1.75e-08!3;UBERON:0009751!1.75e-08!3;UBERON:0000946!1.75e-08!3;UBERON:0002523!1.75e-08!3;UBERON:0005983!1.75e-08!3;UBERON:0002165!1.75e-08!3;UBERON:0002062!1.75e-08!3;UBERON:0007280!1.75e-08!3;UBERON:0001723!5.30e-08!3;UBERON:0001033!5.30e-08!3;UBERON:0010056!5.30e-08!3;UBERON:0007023!7.76e-07!115;UBERON:0000948!8.19e-07!24;UBERON:0005498!8.19e-07!24;UBERON:0004140!8.19e-07!24;UBERON:0009881!8.19e-07!24;UBERON:0004141!8.19e-07!24;UBERON:0003084!8.19e-07!24;UBERON:0007005!8.19e-07!24;UBERON:0004139!8.19e-07!24;UBERON:0004291!8.19e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.15e-25;16!UBERON:0002036;1.15e-25;16!UBERON:0007100;2.70e-16;25!UBERON:0002385;1.99e-12;31!UBERON:0001015;1.99e-12;31!UBERON:0000383;1.99e-12;31!UBERON:0005090;5.21e-12;2!UBERON:0001630;5.21e-12;2!UBERON:0000341;7.63e-12;2!UBERON:0000948;1.36e-08;22!UBERON:0004151;1.43e-08;3!UBERON:0003978;1.54e-08;3!UBERON:0000946;1.54e-08;3!UBERON:0001723;2.31e-08;3!UBERON:0001033;2.31e-08;3!UBERON:0002135;4.33e-07;1!UBERON:0002084;4.58e-07;1!UBERON:0002082;4.58e-07;1!UBERON:0002079;4.85e-07;1!UBERON:0002146;5.74e-07;1!UBERON:0005623;5.74e-07;1!UBERON:0001389;6.07e-07;1!UBERON:0000026;6.07e-07;1!UBERON:0008784;6.07e-07;1!UBERON:0006058;6.07e-07;1!UBERON:0003663;6.07e-07;1!UBERON:0004256;6.07e-07;1!UBERON:0004708;6.07e-07;1!UBERON:0002101;6.07e-07;1!UBERON:0004709;6.07e-07;1!UBERON:0002529;6.07e-07;1!UBERON:0010538;6.07e-07;1!UBERON:0003661;6.07e-07;1!UBERON:0010890;6.07e-07;1!UBERON:0002471;6.07e-07;1!UBERON:0001383;6.07e-07;1!UBERON:0010758;6.07e-07;1!UBERON:0010707;6.07e-07;1!UBERON:0000978;6.07e-07;1!UBERON:0002103;6.07e-07;1!UBERON:0001665;6.07e-07;1!UBERON:0003823;6.07e-07;1!UBERON:0000154;6.07e-07;1!UBERON:0010709;6.07e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.65e-15,27;UBERON:0003103,1.22e-12,68;UBERON:0005090,5.22e-12,2;UBERON:0001630,5.22e-12,2;UBERON:0000341,7.23e-12,2;UBERON:0004151,1.44e-08,3;UBERON:0003978,1.54e-08,3;UBERON:0009751,1.54e-08,3;UBERON:0000946,1.54e-08,3;UBERON:0002523,1.54e-08,3;UBERON:0005983,1.54e-08,3;UBERON:0002165,1.54e-08,3;UBERON:0002062,1.54e-08,3;UBERON:0007280,1.54e-08,3;UBERON:0001723,2.22e-08,3;UBERON:0001033,2.22e-08,3;UBERON:0010056,2.22e-08,3;UBERON:0000948,8.36e-08,24;UBERON:0005498,8.36e-08,24;UBERON:0004140,8.36e-08,24;UBERON:0009881,8.36e-08,24;UBERON:0004141,8.36e-08,24;UBERON:0003084,8.36e-08,24;UBERON:0007005,8.36e-08,24;UBERON:0004139,8.36e-08,24;UBERON:0004291,8.36e-08,24;UBERON:0002135,4.33e-07,1;UBERON:0002084,4.58e-07,1;UBERON:0002082,4.58e-07,1;UBERON:0010226,4.58e-07,1;UBERON:0002079,4.85e-07,1;UBERON:0002146,5.75e-07,1;UBERON:0005623,5.75e-07,1;UBERON:0005418,6.08e-07,1;UBERON:0001389,6.08e-07,1;UBERON:0000026,6.08e-07,1;UBERON:0008784,6.08e-07,1;UBERON:0006058,6.08e-07,1;UBERON:0003663,6.08e-07,1;UBERON:0004256,6.08e-07,1;UBERON:0004708,6.08e-07,1;UBERON:0002101,6.08e-07,1;UBERON:0004709,6.08e-07,1;UBERON:0002529,6.08e-07,1;UBERON:0010538,6.08e-07,1;UBERON:0003661,6.08e-07,1;UBERON:0010890,6.08e-07,1;UBERON:0002471,6.08e-07,1;UBERON:0001383,6.08e-07,1;UBERON:0004357,6.08e-07,1;UBERON:0004347,6.08e-07,1;UBERON:0005420,6.08e-07,1;UBERON:0005732,6.08e-07,1;UBERON:0010758,6.08e-07,1;UBERON:0010707,6.08e-07,1;UBERON:0000978,6.08e-07,1;UBERON:0002103,6.08e-07,1;UBERON:0001665,6.08e-07,1;UBERON:0003823,6.08e-07,1;UBERON:0000154,6.08e-07,1;UBERON:0010709,6.08e-07,1;UBERON:0005733,6.08e-07,1;UBERON:0005730,6.08e-07,1 | |||
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|short_description=p2@TRIM55 | |||
}} |
Revision as of 05:51, 14 September 2013
Short description: | p2@TRIM55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRIM55_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 174bp_to_ENST00000276573, ENST00000350034, NM_033058, NM_184085, NM_184086, NM_184087, uc003xvu.2, uc003xvv.2, uc003xvw.2, uc003xvx.2_5end |
EntrezGene: | TRIM55 |
HGNC: | 14215 |
UniProt: | Q9BYV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 4.76e-21 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.31e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.