FFCP PHASE1:Hg19::chr8:21916584..21916617,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2039|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3382|TSSclassifier=S|UniProt=Q08495|association_with_transcript=-68bp_to_ENST00000358242,ENST00000415253,NM_001114138,NM_001978,uc010ltq.2,uc011kyv.1_5end|coexpression_cluster_id=C14|description=CAGE_peak_8_at_EPB49_5end|id=chr8:21916584..21916617,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;3.11e-17;2!CL:0000558;3.11e-17;2|ontology_enrichment_celltype_v019_2=CL:0000764,3.12e-17,2;CL:0000765,3.12e-17,2;CL:0000050,3.12e-17,2;CL:0000038,3.12e-17,2;CL:0000558,3.12e-17,2;CL:0000547,3.12e-17,2;CL:0000549,3.12e-17,2;CL:0000550,3.12e-17,2;CL:0000552,3.12e-17,2|ontology_enrichment_development_v019=UBERON:0004872;1.01e-10;7!UBERON:0003124;3.67e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.55e-62!115;UBERON:0001049!7.39e-24!57;UBERON:0005068!7.39e-24!57;UBERON:0006241!7.39e-24!57;UBERON:0007135!7.39e-24!57;UBERON:0002780!1.09e-20!41;UBERON:0001890!1.09e-20!41;UBERON:0006240!1.09e-20!41;UBERON:0003080!4.80e-20!42;UBERON:0001893!1.76e-19!34;UBERON:0002020!2.09e-19!34;UBERON:0003528!2.09e-19!34;UBERON:0002616!2.10e-19!59;UBERON:0003075!2.48e-19!86;UBERON:0007284!2.48e-19!86;UBERON:0002791!4.00e-18!33;UBERON:0002346!4.90e-18!90;UBERON:0005743!1.72e-17!86;UBERON:0001017!1.94e-17!82;UBERON:0001869!6.00e-17!32;UBERON:0000178!6.38e-17!15;UBERON:0000179!6.38e-17!15;UBERON:0000463!6.38e-17!15;UBERON:0000955!2.40e-16!69;UBERON:0006238!2.40e-16!69;UBERON:0000073!5.63e-15!94;UBERON:0001016!5.63e-15!94;UBERON:0002308!6.68e-14!9;UBERON:0000125!6.68e-14!9;UBERON:0003056!3.96e-13!61;UBERON:0001950!1.72e-12!20;UBERON:0002619!3.93e-11!22;UBERON:0002420!4.27e-11!9;UBERON:0007245!4.27e-11!9;UBERON:0010009!4.27e-11!9;UBERON:0010011!4.27e-11!9;UBERON:0000454!4.27e-11!9;UBERON:0009663!6.72e-11!7;UBERON:0000369!1.66e-09!4;UBERON:0002435!1.66e-09!4;UBERON:0000204!1.66e-09!4;UBERON:0010082!1.66e-09!4;UBERON:0000956!1.71e-09!25;UBERON:0000203!1.71e-09!25;UBERON:0000153!9.57e-09!129;UBERON:0007811!9.57e-09!129;UBERON:0000025!2.31e-08!194;UBERON:0001871!3.50e-08!7;UBERON:0000200!1.09e-07!6;UBERON:0005383!1.47e-07!3;UBERON:0005382!1.47e-07!3;UBERON:0000033!2.65e-07!123;UBERON:0004121!6.83e-07!169|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-43;15!UBERON:0000179;2.34e-43;15!UBERON:0000463;2.34e-43;15!UBERON:0002390;1.66e-22;32!UBERON:0000369;3.64e-18;4!UBERON:0002435;3.64e-18;4!UBERON:0000204;3.64e-18;4!UBERON:0005383;2.19e-11;3!UBERON:0005382;2.19e-11;3!UBERON:0002193;2.67e-11;42!UBERON:0009663;1.25e-10;7!UBERON:0001882;3.67e-09;1!UBERON:0001874;3.67e-09;1!UBERON:0000996;3.67e-09;1!UBERON:0002134;3.67e-09;1!UBERON:0005208;3.67e-09;1!UBERON:0004145;3.67e-09;1!UBERON:0005946;3.67e-09;1!UBERON:0005403;3.67e-09;1!UBERON:0005965;3.67e-09;1!UBERON:0002078;3.67e-09;1!UBERON:0002420;2.23e-08;9!UBERON:0000125;2.23e-08;9!UBERON:0007245;2.23e-08;9!UBERON:0002308;2.23e-08;9!UBERON:0010009;2.23e-08;9!UBERON:0010011;2.23e-08;9!UBERON:0000454;2.23e-08;9!UBERON:0007023;2.68e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.35e-43,15;UBERON:0000179,2.35e-43,15;UBERON:0000463,2.35e-43,15;UBERON:0007023,3.26e-22,114;UBERON:0000369,4.22e-18,4;UBERON:0002435,4.22e-18,4;UBERON:0000204,4.22e-18,4;UBERON:0010082,4.22e-18,4;UBERON:0005383,1.97e-11,3;UBERON:0005382,1.97e-11,3;UBERON:0009663,1.36e-10,7;UBERON:0001874,2.77e-09,1;UBERON:0002134,3.00e-09,1;UBERON:0005208,3.00e-09,1;UBERON:0005946,3.00e-09,1;UBERON:0005965,3.00e-09,1;UBERON:0002078,3.00e-09,1;UBERON:0000996,3.25e-09,1;UBERON:0001882,5.28e-09,1;UBERON:0005403,5.28e-09,1;UBERON:0002420,2.38e-08,9;UBERON:0000125,2.38e-08,9;UBERON:0007245,2.38e-08,9;UBERON:0002308,2.38e-08,9;UBERON:0010009,2.38e-08,9;UBERON:0010011,2.38e-08,9;UBERON:0000454,2.38e-08,9;UBERON:0004535,2.93e-07,109;UBERON:0001009,5.14e-07,112;UBERON:0002390,9.97e-07,98;UBERON:0003061,9.97e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5941123520479,8.62736988382172,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2039 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |||
|TSSclassifier=S | |||
|UniProt=Q08495 | |||
|association_with_transcript=-68bp_to_ENST00000358242,ENST00000415253,NM_001114138,NM_001978,uc010ltq.2,uc011kyv.1_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_8_at_EPB49_5end | |||
|id=chr8:21916584..21916617,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.11e-17;2!CL:0000558;3.11e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.12e-17,2;CL:0000765,3.12e-17,2;CL:0000050,3.12e-17,2;CL:0000038,3.12e-17,2;CL:0000558,3.12e-17,2;CL:0000547,3.12e-17,2;CL:0000549,3.12e-17,2;CL:0000550,3.12e-17,2;CL:0000552,3.12e-17,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.01e-10;7!UBERON:0003124;3.67e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-62!115;UBERON:0001049!7.39e-24!57;UBERON:0005068!7.39e-24!57;UBERON:0006241!7.39e-24!57;UBERON:0007135!7.39e-24!57;UBERON:0002780!1.09e-20!41;UBERON:0001890!1.09e-20!41;UBERON:0006240!1.09e-20!41;UBERON:0003080!4.80e-20!42;UBERON:0001893!1.76e-19!34;UBERON:0002020!2.09e-19!34;UBERON:0003528!2.09e-19!34;UBERON:0002616!2.10e-19!59;UBERON:0003075!2.48e-19!86;UBERON:0007284!2.48e-19!86;UBERON:0002791!4.00e-18!33;UBERON:0002346!4.90e-18!90;UBERON:0005743!1.72e-17!86;UBERON:0001017!1.94e-17!82;UBERON:0001869!6.00e-17!32;UBERON:0000178!6.38e-17!15;UBERON:0000179!6.38e-17!15;UBERON:0000463!6.38e-17!15;UBERON:0000955!2.40e-16!69;UBERON:0006238!2.40e-16!69;UBERON:0000073!5.63e-15!94;UBERON:0001016!5.63e-15!94;UBERON:0002308!6.68e-14!9;UBERON:0000125!6.68e-14!9;UBERON:0003056!3.96e-13!61;UBERON:0001950!1.72e-12!20;UBERON:0002619!3.93e-11!22;UBERON:0002420!4.27e-11!9;UBERON:0007245!4.27e-11!9;UBERON:0010009!4.27e-11!9;UBERON:0010011!4.27e-11!9;UBERON:0000454!4.27e-11!9;UBERON:0009663!6.72e-11!7;UBERON:0000369!1.66e-09!4;UBERON:0002435!1.66e-09!4;UBERON:0000204!1.66e-09!4;UBERON:0010082!1.66e-09!4;UBERON:0000956!1.71e-09!25;UBERON:0000203!1.71e-09!25;UBERON:0000153!9.57e-09!129;UBERON:0007811!9.57e-09!129;UBERON:0000025!2.31e-08!194;UBERON:0001871!3.50e-08!7;UBERON:0000200!1.09e-07!6;UBERON:0005383!1.47e-07!3;UBERON:0005382!1.47e-07!3;UBERON:0000033!2.65e-07!123;UBERON:0004121!6.83e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-43;15!UBERON:0000179;2.34e-43;15!UBERON:0000463;2.34e-43;15!UBERON:0002390;1.66e-22;32!UBERON:0000369;3.64e-18;4!UBERON:0002435;3.64e-18;4!UBERON:0000204;3.64e-18;4!UBERON:0005383;2.19e-11;3!UBERON:0005382;2.19e-11;3!UBERON:0002193;2.67e-11;42!UBERON:0009663;1.25e-10;7!UBERON:0001882;3.67e-09;1!UBERON:0001874;3.67e-09;1!UBERON:0000996;3.67e-09;1!UBERON:0002134;3.67e-09;1!UBERON:0005208;3.67e-09;1!UBERON:0004145;3.67e-09;1!UBERON:0005946;3.67e-09;1!UBERON:0005403;3.67e-09;1!UBERON:0005965;3.67e-09;1!UBERON:0002078;3.67e-09;1!UBERON:0002420;2.23e-08;9!UBERON:0000125;2.23e-08;9!UBERON:0007245;2.23e-08;9!UBERON:0002308;2.23e-08;9!UBERON:0010009;2.23e-08;9!UBERON:0010011;2.23e-08;9!UBERON:0000454;2.23e-08;9!UBERON:0007023;2.68e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.35e-43,15;UBERON:0000179,2.35e-43,15;UBERON:0000463,2.35e-43,15;UBERON:0007023,3.26e-22,114;UBERON:0000369,4.22e-18,4;UBERON:0002435,4.22e-18,4;UBERON:0000204,4.22e-18,4;UBERON:0010082,4.22e-18,4;UBERON:0005383,1.97e-11,3;UBERON:0005382,1.97e-11,3;UBERON:0009663,1.36e-10,7;UBERON:0001874,2.77e-09,1;UBERON:0002134,3.00e-09,1;UBERON:0005208,3.00e-09,1;UBERON:0005946,3.00e-09,1;UBERON:0005965,3.00e-09,1;UBERON:0002078,3.00e-09,1;UBERON:0000996,3.25e-09,1;UBERON:0001882,5.28e-09,1;UBERON:0005403,5.28e-09,1;UBERON:0002420,2.38e-08,9;UBERON:0000125,2.38e-08,9;UBERON:0007245,2.38e-08,9;UBERON:0002308,2.38e-08,9;UBERON:0010009,2.38e-08,9;UBERON:0010011,2.38e-08,9;UBERON:0000454,2.38e-08,9;UBERON:0004535,2.93e-07,109;UBERON:0001009,5.14e-07,112;UBERON:0002390,9.97e-07,98;UBERON:0003061,9.97e-07,98 | |||
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|short_description=p8@EPB49 | |||
}} |
Revision as of 04:33, 14 September 2013
Short description: | p8@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_EPB49_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -68bp_to_ENST00000358242, ENST00000415253, NM_001114138, NM_001978, uc010ltq.2, uc011kyv.1_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | Q08495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.12e-17 | 2 |
erythroblast | 3.12e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 3.12e-17 | 2 |
erythroid progenitor cell | 3.12e-17 | 2 |
reticulocyte | 3.12e-17 | 2 |
proerythroblast | 3.12e-17 | 2 |
basophilic erythroblast | 3.12e-17 | 2 |
polychromatophilic erythroblast | 3.12e-17 | 2 |
orthochromatic erythroblast | 3.12e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.35e-43 | 15 |
haemolymphatic fluid | 2.35e-43 | 15 |
organism substance | 2.35e-43 | 15 |
adult organism | 3.26e-22 | 114 |
corpus striatum | 4.22e-18 | 4 |
striatum | 4.22e-18 | 4 |
ventral part of telencephalon | 4.22e-18 | 4 |
future corpus striatum | 4.22e-18 | 4 |
caudate-putamen | 1.97e-11 | 3 |
dorsal striatum | 1.97e-11 | 3 |
telencephalic nucleus | 1.36e-10 | 7 |
putamen | 2.77e-09 | 1 |
tricuspid valve | 3.00e-09 | 1 |
right atrium valve | 3.00e-09 | 1 |
outflow tract of atrium | 3.00e-09 | 1 |
outflow part of right atrium | 3.00e-09 | 1 |
right cardiac atrium | 3.00e-09 | 1 |
vagina | 3.25e-09 | 1 |
nucleus accumbens | 5.28e-09 | 1 |
ventral striatum | 5.28e-09 | 1 |
basal ganglion | 2.38e-08 | 9 |
neural nucleus | 2.38e-08 | 9 |
nuclear complex of neuraxis | 2.38e-08 | 9 |
nucleus of brain | 2.38e-08 | 9 |
aggregate regional part of brain | 2.38e-08 | 9 |
collection of basal ganglia | 2.38e-08 | 9 |
cerebral subcortex | 2.38e-08 | 9 |
cardiovascular system | 2.93e-07 | 109 |
circulatory system | 5.14e-07 | 112 |
hematopoietic system | 9.97e-07 | 98 |
blood island | 9.97e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.