FFCP PHASE1:Hg19::chr8:19459753..19459765,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24290|TSSclassifier=S|UniProt=|association_with_transcript=-18bp_to_ENST00000523919,ENST00000524112_5end|coexpression_cluster_id=C4741|description=CAGE_peak_9_at_CSGALNACT1_5end|id=chr8:19459753..19459765,-|ontology_enrichment_celltype=CL:0000153!1.31e-07!9;CL:0000447!1.31e-07!9;CL:0000667!7.34e-07!6;CL:0000058!7.34e-07!6;CL:0000138!7.34e-07!6|ontology_enrichment_celltype_v019=CL:0002552;9.28e-13;5!CL:0000138;1.49e-10;6!CL:0002602;3.22e-09;2!CL:0000153;4.86e-07;9!CL:0000447;4.86e-07;9|ontology_enrichment_celltype_v019_2=CL:0002552,9.37e-13,5;CL:0000058,1.09e-10,6;CL:0000138,1.09e-10,6;CL:0002602,2.77e-09,2;CL:0000153,3.96e-07,9;CL:0000447,3.96e-07,9|ontology_enrichment_development_v019=UBERON:0006241;1.32e-11;3!UBERON:0003057;1.32e-11;3!UBERON:0006601;2.95e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.10e-35!57;UBERON:0005068!2.10e-35!57;UBERON:0006241!2.10e-35!57;UBERON:0007135!2.10e-35!57;UBERON:0007023!6.85e-30!115;UBERON:0001893!2.88e-29!34;UBERON:0002020!9.66e-29!34;UBERON:0003528!9.66e-29!34;UBERON:0002780!1.37e-28!41;UBERON:0001890!1.37e-28!41;UBERON:0006240!1.37e-28!41;UBERON:0002616!4.86e-28!59;UBERON:0002791!6.27e-28!33;UBERON:0003080!1.17e-27!42;UBERON:0001869!3.43e-27!32;UBERON:0001017!1.14e-26!82;UBERON:0000955!3.27e-26!69;UBERON:0006238!3.27e-26!69;UBERON:0005743!7.43e-26!86;UBERON:0003075!2.35e-24!86;UBERON:0007284!2.35e-24!86;UBERON:0000073!5.90e-23!94;UBERON:0001016!5.90e-23!94;UBERON:0002346!1.35e-22!90;UBERON:0002619!2.18e-22!22;UBERON:0000477!1.39e-21!286;UBERON:0000025!2.51e-21!194;UBERON:0004111!5.70e-20!241;UBERON:0001950!6.15e-20!20;UBERON:0000153!2.41e-19!129;UBERON:0007811!2.41e-19!129;UBERON:0000956!5.34e-19!25;UBERON:0000203!5.34e-19!25;UBERON:0000033!2.19e-18!123;UBERON:0003056!5.53e-18!61;UBERON:0004121!7.65e-13!169;UBERON:0000924!3.57e-12!173;UBERON:0006601!3.57e-12!173;UBERON:0002308!1.69e-11!9;UBERON:0000125!1.69e-11!9;UBERON:0000483!3.79e-11!309;UBERON:0000119!7.92e-11!312;UBERON:0000064!5.35e-10!219;UBERON:0000200!1.19e-09!6;UBERON:0009663!1.63e-09!7;UBERON:0002420!1.73e-09!9;UBERON:0007245!1.73e-09!9;UBERON:0010009!1.73e-09!9;UBERON:0010011!1.73e-09!9;UBERON:0000454!1.73e-09!9;UBERON:0000475!4.39e-09!365;UBERON:0003076!7.88e-09!15;UBERON:0003057!7.88e-09!15;UBERON:0005174!2.33e-08!5;UBERON:0001137!2.33e-08!5;UBERON:0000481!2.45e-08!347;UBERON:0002021!1.17e-07!5;UBERON:0002298!4.10e-07!8;UBERON:0001871!9.36e-07!7|ontology_enrichment_uberon_v019=UBERON:0001893;5.19e-30;34!UBERON:0002619;3.04e-29;22!UBERON:0001950;7.34e-28;20!UBERON:0001869;1.09e-27;32!UBERON:0002791;2.59e-26;32!UBERON:0000956;1.75e-25;25!UBERON:0000203;1.75e-25;25!UBERON:0003528;3.57e-23;34!UBERON:0002020;3.57e-23;34!UBERON:0002780;1.28e-22;41!UBERON:0001890;1.28e-22;41!UBERON:0000073;4.84e-17;53!UBERON:0002616;4.84e-17;53!UBERON:0000200;1.97e-15;6!UBERON:0001017;1.72e-12;75!UBERON:0001870;2.23e-12;3!UBERON:0002021;6.05e-12;5!UBERON:0000955;8.17e-12;68!UBERON:0002240;1.32e-11;3!UBERON:0005174;1.32e-11;3!UBERON:0001137;1.32e-11;3!UBERON:0001016;1.12e-09;83!UBERON:0006444;3.22e-09;2!UBERON:0001995;3.22e-09;2!UBERON:0004715;3.22e-09;2!UBERON:0001871;5.62e-09;6!UBERON:0000369;8.08e-09;4!UBERON:0002435;8.08e-09;4!UBERON:0000204;8.08e-09;4!UBERON:0002702;1.10e-08;2!UBERON:0000075;1.89e-08;16!UBERON:0002771;2.69e-08;2!UBERON:0011135;5.16e-08;5!UBERON:0002216;5.16e-08;5!UBERON:0011134;5.16e-08;5!UBERON:0002209;5.16e-08;5!UBERON:0002213;5.16e-08;5!UBERON:0007844;5.16e-08;5!UBERON:0011138;5.16e-08;5!UBERON:0001130;5.16e-08;5!UBERON:0001066;5.16e-08;5!UBERON:0001468;5.16e-08;5!UBERON:0001828;5.53e-08;8!UBERON:0000349;2.32e-07;5!UBERON:0011216;4.31e-07;132!UBERON:0002420;8.02e-07;9!UBERON:0007245;8.02e-07;9!UBERON:0010009;8.02e-07;9!UBERON:0010011;8.02e-07;9!UBERON:0000454;8.02e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.27e-35,56;UBERON:0005068,4.27e-35,56;UBERON:0006241,4.27e-35,56;UBERON:0007135,4.27e-35,56;UBERON:0002780,1.08e-34,41;UBERON:0001890,1.08e-34,41;UBERON:0003080,1.08e-34,41;UBERON:0006240,1.08e-34,41;UBERON:0001893,1.26e-34,34;UBERON:0001869,3.45e-33,32;UBERON:0002619,1.11e-29,22;UBERON:0002791,2.23e-29,32;UBERON:0000073,1.49e-28,53;UBERON:0002616,1.49e-28,53;UBERON:0001950,3.12e-28,20;UBERON:0003528,1.86e-27,34;UBERON:0002020,1.86e-27,34;UBERON:0001017,2.32e-26,81;UBERON:0000956,7.22e-26,25;UBERON:0000203,7.22e-26,25;UBERON:0000955,3.32e-25,68;UBERON:0006238,3.32e-25,68;UBERON:0001016,4.03e-23,89;UBERON:0003075,4.04e-22,82;UBERON:0007284,4.04e-22,82;UBERON:0003056,8.87e-22,61;UBERON:0002346,8.14e-21,86;UBERON:0010314,7.53e-17,132;UBERON:0010371,3.44e-16,104;UBERON:0000200,4.77e-16,6;UBERON:0007023,8.53e-16,114;UBERON:0004121,9.80e-16,171;UBERON:0000924,9.80e-16,171;UBERON:0006601,9.80e-16,171;UBERON:0001870,1.06e-12,3;UBERON:0011216,3.78e-12,223;UBERON:0002021,3.82e-12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,0.213233981900981,0.952257725854961,0.0645889098360061,0,0,0.954707374172474,4.04234377916439,0,0.342233301085281,0.0673520530145875,0.286888821570705,1.33064142618405,0,0,0,0,0,0.244482888365733,0,0,0,0|short_description=p9@CSGALNACT1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000523919,ENST00000524112_5end | |||
|coexpression_cluster_id=C4741 | |||
|description=CAGE_peak_9_at_CSGALNACT1_5end | |||
|id=chr8:19459753..19459765,- | |||
|ontology_enrichment_celltype=CL:0000153!1.31e-07!9;CL:0000447!1.31e-07!9;CL:0000667!7.34e-07!6;CL:0000058!7.34e-07!6;CL:0000138!7.34e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002552;9.28e-13;5!CL:0000138;1.49e-10;6!CL:0002602;3.22e-09;2!CL:0000153;4.86e-07;9!CL:0000447;4.86e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,9.37e-13,5;CL:0000058,1.09e-10,6;CL:0000138,1.09e-10,6;CL:0002602,2.77e-09,2;CL:0000153,3.96e-07,9;CL:0000447,3.96e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.32e-11;3!UBERON:0003057;1.32e-11;3!UBERON:0006601;2.95e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.10e-35!57;UBERON:0005068!2.10e-35!57;UBERON:0006241!2.10e-35!57;UBERON:0007135!2.10e-35!57;UBERON:0007023!6.85e-30!115;UBERON:0001893!2.88e-29!34;UBERON:0002020!9.66e-29!34;UBERON:0003528!9.66e-29!34;UBERON:0002780!1.37e-28!41;UBERON:0001890!1.37e-28!41;UBERON:0006240!1.37e-28!41;UBERON:0002616!4.86e-28!59;UBERON:0002791!6.27e-28!33;UBERON:0003080!1.17e-27!42;UBERON:0001869!3.43e-27!32;UBERON:0001017!1.14e-26!82;UBERON:0000955!3.27e-26!69;UBERON:0006238!3.27e-26!69;UBERON:0005743!7.43e-26!86;UBERON:0003075!2.35e-24!86;UBERON:0007284!2.35e-24!86;UBERON:0000073!5.90e-23!94;UBERON:0001016!5.90e-23!94;UBERON:0002346!1.35e-22!90;UBERON:0002619!2.18e-22!22;UBERON:0000477!1.39e-21!286;UBERON:0000025!2.51e-21!194;UBERON:0004111!5.70e-20!241;UBERON:0001950!6.15e-20!20;UBERON:0000153!2.41e-19!129;UBERON:0007811!2.41e-19!129;UBERON:0000956!5.34e-19!25;UBERON:0000203!5.34e-19!25;UBERON:0000033!2.19e-18!123;UBERON:0003056!5.53e-18!61;UBERON:0004121!7.65e-13!169;UBERON:0000924!3.57e-12!173;UBERON:0006601!3.57e-12!173;UBERON:0002308!1.69e-11!9;UBERON:0000125!1.69e-11!9;UBERON:0000483!3.79e-11!309;UBERON:0000119!7.92e-11!312;UBERON:0000064!5.35e-10!219;UBERON:0000200!1.19e-09!6;UBERON:0009663!1.63e-09!7;UBERON:0002420!1.73e-09!9;UBERON:0007245!1.73e-09!9;UBERON:0010009!1.73e-09!9;UBERON:0010011!1.73e-09!9;UBERON:0000454!1.73e-09!9;UBERON:0000475!4.39e-09!365;UBERON:0003076!7.88e-09!15;UBERON:0003057!7.88e-09!15;UBERON:0005174!2.33e-08!5;UBERON:0001137!2.33e-08!5;UBERON:0000481!2.45e-08!347;UBERON:0002021!1.17e-07!5;UBERON:0002298!4.10e-07!8;UBERON:0001871!9.36e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.19e-30;34!UBERON:0002619;3.04e-29;22!UBERON:0001950;7.34e-28;20!UBERON:0001869;1.09e-27;32!UBERON:0002791;2.59e-26;32!UBERON:0000956;1.75e-25;25!UBERON:0000203;1.75e-25;25!UBERON:0003528;3.57e-23;34!UBERON:0002020;3.57e-23;34!UBERON:0002780;1.28e-22;41!UBERON:0001890;1.28e-22;41!UBERON:0000073;4.84e-17;53!UBERON:0002616;4.84e-17;53!UBERON:0000200;1.97e-15;6!UBERON:0001017;1.72e-12;75!UBERON:0001870;2.23e-12;3!UBERON:0002021;6.05e-12;5!UBERON:0000955;8.17e-12;68!UBERON:0002240;1.32e-11;3!UBERON:0005174;1.32e-11;3!UBERON:0001137;1.32e-11;3!UBERON:0001016;1.12e-09;83!UBERON:0006444;3.22e-09;2!UBERON:0001995;3.22e-09;2!UBERON:0004715;3.22e-09;2!UBERON:0001871;5.62e-09;6!UBERON:0000369;8.08e-09;4!UBERON:0002435;8.08e-09;4!UBERON:0000204;8.08e-09;4!UBERON:0002702;1.10e-08;2!UBERON:0000075;1.89e-08;16!UBERON:0002771;2.69e-08;2!UBERON:0011135;5.16e-08;5!UBERON:0002216;5.16e-08;5!UBERON:0011134;5.16e-08;5!UBERON:0002209;5.16e-08;5!UBERON:0002213;5.16e-08;5!UBERON:0007844;5.16e-08;5!UBERON:0011138;5.16e-08;5!UBERON:0001130;5.16e-08;5!UBERON:0001066;5.16e-08;5!UBERON:0001468;5.16e-08;5!UBERON:0001828;5.53e-08;8!UBERON:0000349;2.32e-07;5!UBERON:0011216;4.31e-07;132!UBERON:0002420;8.02e-07;9!UBERON:0007245;8.02e-07;9!UBERON:0010009;8.02e-07;9!UBERON:0010011;8.02e-07;9!UBERON:0000454;8.02e-07;9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.84662611808107,3.31397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,3.00802746381534,1.44846518960824,2.3858578411533,0.973269740605272,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0.371457501329565,0.79504962946682,0,0.694281003215189,0,0,0,0.208994966536811,0,0.35576626268671,1.33888245105868,0,0,0,0.735326160691737,0.81014194788176,0.625098097988558,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,3.67477508258808,0,3.09977343527296,1.18800285728205,1.7308685049499,0,0,0,0,1.6623846929051,0,0,2.55404700141215,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53958519360818,0.500170521059677,0.542530047399471,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25924938732256,1.3940745403212,0,0,3.47973196830029,0,0,0,0,0,0,0,1.27281299170375,0,0,0,0,0,0,0,0,0.974853958525138,0,0,0,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,2.11004124615769,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,1.29875337426592,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,1.08536794762867,0,0.331737779793674,0.591095237907095,0.658156191461918,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,1.21322039365219,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,2.78567502205866,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.953423842781029,0,0,0,0,0,2.49073182297901,0,0,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.39669780522807,1.02652102730598,0,0.747511887973863,0.78602152549833,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.34228891392159,2.8793914062495,1.72022758707021,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99110597799025,1.41696576325585,1.27707087245721,1.8460472781668,0.252071696221718,1.52145955421279,2.26065903884592,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,1.95858995393344,0,0.826747186004736,2.02930592620502,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.339848664884159,0.920818829879887,0,0,0.078493092850514,1.57115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,1.37415926980462,1.18818560130834,1.2679671827502,1.52934403219035,0,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,2.24371917630019,0.436350690340377,0,1.11598505450025,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,2.48750831837634,0.413731983447581,0.213233981900981,0.952257725854961,0.0645889098360061,0,0,0.954707374172474,4.04234377916439,0,0.342233301085281,0.0673520530145875,0.286888821570705,1.33064142618405,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p9@CSGALNACT1 | |||
}} |
Revision as of 04:27, 14 September 2013
Short description: | p9@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_CSGALNACT1_5end |
Coexpression cluster: | C4741_Nucleus_Chondrocyte_thyroid_hippocampus_Fibroblast_medial_insula |
Association with transcript: | -18bp_to_ENST00000523919, ENST00000524112_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 9.37e-13 | 5 |
chondroblast | 1.09e-10 | 6 |
chondrocyte | 1.09e-10 | 6 |
annulus pulposus cell | 2.77e-09 | 2 |
GAG secreting cell | 3.96e-07 | 9 |
carbohydrate secreting cell | 3.96e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.