FFCP PHASE1:Hg19::chr8:18541669..18541676,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23362|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19093|TSSclassifier=S|UniProt=|association_with_transcript=-38bp_to_ENST00000521878_5end|coexpression_cluster_id=C3|description=CAGE_peak_16_at_PSD3_5end|id=chr8:18541669..18541676,-|ontology_enrichment_celltype=CL:0000064!1.15e-08!3;CL:0005012!1.15e-08!3;CL:0000067!1.15e-08!3;CL:0002304!1.15e-08!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;3.53e-19;3!UBERON:0006601;4.40e-17;82!UBERON:0010122;1.61e-12;2!UBERON:0006222;4.18e-07;1!UBERON:0005425;9.18e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.34e-87!57;UBERON:0005068!8.34e-87!57;UBERON:0006241!8.34e-87!57;UBERON:0007135!8.34e-87!57;UBERON:0003075!2.38e-77!86;UBERON:0007284!2.38e-77!86;UBERON:0002346!2.11e-76!90;UBERON:0002616!9.46e-76!59;UBERON:0005743!1.30e-70!86;UBERON:0000955!4.10e-69!69;UBERON:0006238!4.10e-69!69;UBERON:0000073!2.02e-68!94;UBERON:0001016!2.02e-68!94;UBERON:0001017!2.38e-68!82;UBERON:0002780!3.90e-68!41;UBERON:0001890!3.90e-68!41;UBERON:0006240!3.90e-68!41;UBERON:0003080!2.52e-66!42;UBERON:0001893!1.16e-63!34;UBERON:0002020!2.84e-63!34;UBERON:0003528!2.84e-63!34;UBERON:0003056!3.08e-61!61;UBERON:0002791!5.44e-61!33;UBERON:0001869!9.55e-59!32;UBERON:0007023!7.18e-58!115;UBERON:0000033!6.86e-48!123;UBERON:0002619!3.68e-47!22;UBERON:0000153!4.38e-45!129;UBERON:0007811!4.38e-45!129;UBERON:0001950!8.27e-42!20;UBERON:0000956!4.87e-41!25;UBERON:0000203!4.87e-41!25;UBERON:0000924!1.37e-39!173;UBERON:0006601!1.37e-39!173;UBERON:0004121!3.78e-39!169;UBERON:0002420!1.04e-24!9;UBERON:0007245!1.04e-24!9;UBERON:0010009!1.04e-24!9;UBERON:0010011!1.04e-24!9;UBERON:0000454!1.04e-24!9;UBERON:0002308!4.93e-24!9;UBERON:0000125!4.93e-24!9;UBERON:0000025!1.22e-20!194;UBERON:0003076!1.67e-20!15;UBERON:0003057!1.67e-20!15;UBERON:0004732!4.91e-20!13;UBERON:0009663!1.93e-19!7;UBERON:0000200!7.77e-18!6;UBERON:0004733!1.07e-17!12;UBERON:0002028!1.07e-17!12;UBERON:0007277!1.07e-17!12;UBERON:0001871!1.83e-17!7;UBERON:0002298!1.15e-15!8;UBERON:0004111!3.42e-15!241;UBERON:0000349!3.79e-15!5;UBERON:0000064!6.84e-15!219;UBERON:0001872!7.11e-15!5;UBERON:0000483!1.84e-14!309;UBERON:0000119!3.39e-14!312;UBERON:0000477!4.04e-14!286;UBERON:0000369!1.39e-12!4;UBERON:0002435!1.39e-12!4;UBERON:0000204!1.39e-12!4;UBERON:0010082!1.39e-12!4;UBERON:0002680!3.06e-11!9;UBERON:0001895!3.06e-11!9;UBERON:0010092!3.06e-11!9;UBERON:0000475!2.59e-10!365;UBERON:0000062!8.25e-10!511;UBERON:0005383!8.72e-10!3;UBERON:0005382!8.72e-10!3;UBERON:0002771!9.51e-10!3;UBERON:0006331!9.53e-09!3;UBERON:0001896!1.12e-08!3;UBERON:0005290!1.12e-08!3;UBERON:0010096!1.12e-08!3;UBERON:0001778!1.15e-08!3;UBERON:0001775!1.15e-08!3;UBERON:0000988!1.28e-08!3;UBERON:0000922!2.26e-08!612;UBERON:0002050!5.06e-08!605;UBERON:0005423!5.06e-08!605;UBERON:0000923!1.79e-07!604;UBERON:0005291!1.79e-07!604;UBERON:0006598!1.79e-07!604;UBERON:0002532!1.79e-07!604;UBERON:0001870!3.08e-07!2;UBERON:0001873!4.65e-07!2;UBERON:0001954!4.65e-07!2;UBERON:0003022!4.65e-07!2;UBERON:0002421!4.65e-07!2;UBERON:0002600!4.65e-07!2;UBERON:0010122!4.65e-07!2;UBERON:0000481!5.38e-07!347;UBERON:0001876!5.88e-07!2;UBERON:0002104!6.64e-07!21;UBERON:0001894!7.88e-07!7;UBERON:0006222!7.88e-07!7;UBERON:0001897!9.59e-07!2|ontology_enrichment_uberon_v019=UBERON:0001869;3.52e-77;32!UBERON:0002619;4.24e-77;22!UBERON:0001893;5.76e-72;34!UBERON:0002791;3.70e-71;32!UBERON:0000956;9.12e-68;25!UBERON:0000203;9.12e-68;25!UBERON:0003528;7.26e-67;34!UBERON:0002020;7.26e-67;34!UBERON:0001950;1.05e-66;20!UBERON:0002780;8.84e-58;41!UBERON:0001890;8.84e-58;41!UBERON:0000073;1.50e-45;53!UBERON:0002616;1.50e-45;53!UBERON:0000955;7.45e-35;68!UBERON:0000200;2.97e-34;6!UBERON:0001017;6.19e-33;75!UBERON:0000349;1.47e-28;5!UBERON:0001016;1.14e-24;83!UBERON:0000369;1.62e-23;4!UBERON:0002435;1.62e-23;4!UBERON:0000204;1.62e-23;4!UBERON:0002420;1.77e-22;9!UBERON:0007245;1.77e-22;9!UBERON:0010009;1.77e-22;9!UBERON:0010011;1.77e-22;9!UBERON:0000454;1.77e-22;9!UBERON:0001871;1.79e-20;6!UBERON:0001872;7.53e-19;5!UBERON:0001870;3.99e-18;3!UBERON:0005383;6.54e-18;3!UBERON:0005382;6.54e-18;3!UBERON:0007023;8.12e-17;114!UBERON:0009663;1.60e-13;7!UBERON:0002771;9.27e-13;2!UBERON:0001873;1.61e-12;2!UBERON:0001954;1.61e-12;2!UBERON:0003022;1.61e-12;2!UBERON:0002421;1.61e-12;2!UBERON:0002600;1.61e-12;2!UBERON:0002702;1.66e-12;2!UBERON:0001876;3.32e-12;2!UBERON:0011216;1.37e-11;132!UBERON:0002021;1.13e-10;5!UBERON:0000125;1.52e-10;9!UBERON:0002308;1.52e-10;9!UBERON:0002037;7.85e-10;6!UBERON:0010314;9.49e-10;132!UBERON:0001894;9.30e-08;7!UBERON:0004732;1.59e-07;13!UBERON:0002022;1.98e-07;1!UBERON:0001882;2.44e-07;1!UBERON:0005403;2.44e-07;1!UBERON:0002581;4.18e-07;1!UBERON:0001874;4.18e-07;1!UBERON:0003112;4.18e-07;1!UBERON:0011158;4.18e-07;1!UBERON:0007190;4.18e-07;1!UBERON:0003128;4.18e-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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_ENST00000521878_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_16_at_PSD3_5end | |||
|id=chr8:18541669..18541676,- | |||
|ontology_enrichment_celltype=CL:0000064!1.15e-08!3;CL:0005012!1.15e-08!3;CL:0000067!1.15e-08!3;CL:0002304!1.15e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.53e-19;3!UBERON:0006601;4.40e-17;82!UBERON:0010122;1.61e-12;2!UBERON:0006222;4.18e-07;1!UBERON:0005425;9.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p16@PSD3 | |||
}} |
Revision as of 04:25, 14 September 2013
Short description: | p16@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_PSD3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -38bp_to_ENST00000521878_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.