FFCP PHASE1:Mm9::chr4:133899598..133899619,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230810|HGNC=|MCL_coexpression_id=12|UniProt=D3Z5N1|association_with_transcript=-4bp_to_ENSMUST00000081094,uc008vev.1_5end|description=CAGE_peak_3_at_Slc30a2_5end|id=chr4:133899598..133899619,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,4.30e-08,6;CL:0000677,4.30e-08,6;CL:0000584,4.30e-08,6;CL:0000682,2.54e-07,3;CL:0000075,7.03e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.29e-18!43;UBERON:0000344!6.01e-12!15;UBERON:0005409!1.76e-11!59;UBERON:0001242!4.18e-10!13;UBERON:0000060!4.18e-10!13;UBERON:0001262!4.18e-10!13;UBERON:0004786!4.18e-10!13;UBERON:0000991!2.53e-09!18;UBERON:0005564!2.53e-09!18;UBERON:0002369!8.43e-09!7;UBERON:0006858!8.43e-09!7;UBERON:0004176!1.10e-08!17;UBERON:0009196!1.10e-08!17;UBERON:0009117!1.10e-08!17;UBERON:0004923!1.49e-08!24;UBERON:0003101!1.75e-08!16;UBERON:0000079!1.75e-08!16;UBERON:0003135!4.52e-08!15;UBERON:0003133!6.62e-08!24;UBERON:0005156!8.60e-08!26;UBERON:0000990!8.60e-08!26;UBERON:0000473!2.52e-07!14;UBERON:0003064!2.87e-07!14;UBERON:0003886!3.08e-07!38;UBERON:0002553!6.83e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.58e-27,31;UBERON:0005409,5.74e-16,47;UBERON:0002369,3.56e-15,7;UBERON:0006858,3.56e-15,7;UBERON:0000344,1.93e-14,15;UBERON:0001242,2.83e-11,13;UBERON:0001262,2.83e-11,13;UBERON:0004786,2.83e-11,13;UBERON:0003064,8.07e-09,14;UBERON:0002108,8.14e-09,4;UBERON:0004923,4.11e-08,24;UBERON:0000331,6.81e-07,3;UBERON:0002116,6.81e-07,3;UBERON:0001204,6.81e-07,3;UBERON:0001168,6.81e-07,3|phase1_expression=0,9.42233600626275,9.55498402718026,1.51232105653415,1.00179145989269,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.19984845586813,4.12936705920906,8.6134794617253,5.1691439539089,4.52489588640367,3.6104449696711,3.02436155711917,5.98672378769323,0,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,9.05497048295431,2.4287945747259,7.00270600117925,7.37969591219387,8.13902258984162,4.11560474974967,6.78599593180248,0.494389935468748,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,1.76905930903572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,2.3800550999719,0,0,0,0.80673409849337,2.2237804384487,3.99473814836374,3.32170343081158,6.42325923423642,5.52937459360593,5.17286827306992,5.65395852645448,1.79763881730844,2.80979464837102,3.18626037206988,0.379335801906163,0.114248512609729,0,0,0,0.280543279561274,0.442655759869801,1.18088118383682,1.8839847340965,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,1.22974059177571,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,5.82961673259701,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,1.64468200648377,1.65458490457098,1.16670713006429,2.0665571756437,1.68956125490778,0.938857909166032,1.8228613878153,1.25831213310853,0.241584120826006,0.864090018773596,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.735994600671987,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p3@Slc30a2}} | ||
|EntrezGene=230810 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=D3Z5N1 | |||
|association_with_transcript=-4bp_to_ENSMUST00000081094,uc008vev.1_5end | |||
|description=CAGE_peak_3_at_Slc30a2_5end | |||
|id=chr4:133899598..133899619,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.30e-08,6;CL:0000677,4.30e-08,6;CL:0000584,4.30e-08,6;CL:0000682,2.54e-07,3;CL:0000075,7.03e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.29e-18!43;UBERON:0000344!6.01e-12!15;UBERON:0005409!1.76e-11!59;UBERON:0001242!4.18e-10!13;UBERON:0000060!4.18e-10!13;UBERON:0001262!4.18e-10!13;UBERON:0004786!4.18e-10!13;UBERON:0000991!2.53e-09!18;UBERON:0005564!2.53e-09!18;UBERON:0002369!8.43e-09!7;UBERON:0006858!8.43e-09!7;UBERON:0004176!1.10e-08!17;UBERON:0009196!1.10e-08!17;UBERON:0009117!1.10e-08!17;UBERON:0004923!1.49e-08!24;UBERON:0003101!1.75e-08!16;UBERON:0000079!1.75e-08!16;UBERON:0003135!4.52e-08!15;UBERON:0003133!6.62e-08!24;UBERON:0005156!8.60e-08!26;UBERON:0000990!8.60e-08!26;UBERON:0000473!2.52e-07!14;UBERON:0003064!2.87e-07!14;UBERON:0003886!3.08e-07!38;UBERON:0002553!6.83e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.58e-27,31;UBERON:0005409,5.74e-16,47;UBERON:0002369,3.56e-15,7;UBERON:0006858,3.56e-15,7;UBERON:0000344,1.93e-14,15;UBERON:0001242,2.83e-11,13;UBERON:0001262,2.83e-11,13;UBERON:0004786,2.83e-11,13;UBERON:0003064,8.07e-09,14;UBERON:0002108,8.14e-09,4;UBERON:0004923,4.11e-08,24;UBERON:0000331,6.81e-07,3;UBERON:0002116,6.81e-07,3;UBERON:0001204,6.81e-07,3;UBERON:0001168,6.81e-07,3 | |||
|phase1_expression=0,9.42233600626275,9.55498402718026,1.51232105653415,1.00179145989269,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.19984845586813,4.12936705920906,8.6134794617253,5.1691439539089,4.52489588640367,3.6104449696711,3.02436155711917,5.98672378769323,0,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,9.05497048295431,2.4287945747259,7.00270600117925,7.37969591219387,8.13902258984162,4.11560474974967,6.78599593180248,0.494389935468748,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,1.76905930903572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,2.3800550999719,0,0,0,0.80673409849337,2.2237804384487,3.99473814836374,3.32170343081158,6.42325923423642,5.52937459360593,5.17286827306992,5.65395852645448,1.79763881730844,2.80979464837102,3.18626037206988,0.379335801906163,0.114248512609729,0,0,0,0.280543279561274,0.442655759869801,1.18088118383682,1.8839847340965,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,1.22974059177571,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,5.82961673259701,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,1.64468200648377,1.65458490457098,1.16670713006429,2.0665571756437,1.68956125490778,0.938857909166032,1.8228613878153,1.25831213310853,0.241584120826006,0.864090018773596,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.735994600671987,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p3@Slc30a2 | |||
}} |
Revision as of 04:04, 14 September 2013
Short description: | p3@Slc30a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc30a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -4bp_to_ENSMUST00000081094, uc008vev.1_5end |
EntrezGene: | Slc30a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.30e-08 | 6 |
gut absorptive cell | 4.30e-08 | 6 |
enterocyte | 4.30e-08 | 6 |
M cell of gut | 2.54e-07 | 3 |
columnar/cuboidal epithelial cell | 7.03e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.58e-27 | 31 |
gastrointestinal system | 5.74e-16 | 47 |
adrenal gland | 3.56e-15 | 7 |
adrenal/interrenal gland | 3.56e-15 | 7 |
mucosa | 1.93e-14 | 15 |
intestinal mucosa | 2.83e-11 | 13 |
wall of intestine | 2.83e-11 | 13 |
gastrointestinal system mucosa | 2.83e-11 | 13 |
intermediate mesoderm | 8.07e-09 | 14 |
small intestine | 8.14e-09 | 4 |
organ component layer | 4.11e-08 | 24 |
ileal mucosa | 6.81e-07 | 3 |
ileum | 6.81e-07 | 3 |
mucosa of small intestine | 6.81e-07 | 3 |
wall of small intestine | 6.81e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.