FFCP PHASE1:Hg19::chr8:126448604..126448616,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10221|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=16891|TSSclassifier=S|UniProt=|association_with_transcript=-45bp_to_BC012441_5end|coexpression_cluster_id=C107|description=CAGE_peak_25_at_TRIB1_5end|id=chr8:126448604..126448616,+|ontology_enrichment_celltype=CL:0000860!1.79e-19!45;CL:0002057!1.03e-18!42;CL:0000766!1.77e-15!76;CL:0002009!2.35e-13!65;CL:0002194!5.08e-13!63;CL:0000576!5.08e-13!63;CL:0000040!5.08e-13!63;CL:0000559!5.08e-13!63;CL:0000557!1.96e-11!71;CL:0000839!8.17e-11!70;CL:0000763!3.18e-10!112;CL:0000049!3.18e-10!112;CL:0000738!7.65e-10!140;CL:0002087!7.37e-08!119;CL:0000988!1.67e-07!182;CL:0000037!4.22e-07!172;CL:0000566!4.22e-07!172;CL:0002032!6.13e-07!165;CL:0000837!6.13e-07!165;CL:0000094!9.71e-07!8|ontology_enrichment_celltype_v019=CL:0000860;3.27e-37;33!CL:0002057;3.27e-37;33!CL:0000775;1.57e-30;3!CL:0000473;3.66e-27;39!CL:0000234;3.66e-27;39!CL:0000576;1.58e-20;48!CL:0000094;2.43e-20;8!CL:0000081;7.18e-15;11!CL:0000766;7.36e-13;69!CL:0000763;1.04e-10;100!CL:0000738;6.50e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,3.93e-38,42;CL:0002057,3.93e-38,42;CL:0000766,4.27e-37,72;CL:0000473,3.92e-33,48;CL:0000234,3.92e-33,48;CL:0000775,1.11e-30,3;CL:0002194,3.96e-26,59;CL:0000576,3.96e-26,59;CL:0000040,3.96e-26,59;CL:0000559,3.96e-26,59;CL:0002009,3.18e-25,61;CL:0000763,4.68e-24,108;CL:0000049,4.68e-24,108;CL:0000839,3.38e-23,66;CL:0000557,7.90e-23,67;CL:0000094,1.99e-20,8;CL:0000738,1.23e-18,136;CL:0002032,2.27e-15,161;CL:0000837,2.27e-15,161;CL:0000081,6.22e-15,11;CL:0000037,1.25e-14,168;CL:0000988,9.26e-14,177;CL:0002087,1.46e-12,115;CL:0002031,5.87e-12,120;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386|ontology_enrichment_development_v019=CL:0002057;2.11e-28;42!UBERON:0003099;3.45e-11;1!UBERON:0003852;3.45e-11;1!CL:0000049;6.75e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.27e-11!80;UBERON:0001474!4.74e-11!86;UBERON:0002390!1.60e-10!102;UBERON:0003061!1.60e-10!102;UBERON:0002193!2.37e-09!112;UBERON:0004765!5.80e-08!101;UBERON:0001434!5.80e-08!101;UBERON:0002405!6.41e-08!115|ontology_enrichment_uberon_v019=UBERON:0005705;3.45e-11;1!UBERON:0008193;3.45e-11;1!UBERON:0010912;3.45e-11;1!UBERON:0002514;3.45e-11;1!UBERON:0003457;3.45e-11;1!UBERON:0008907;3.45e-11;1!UBERON:0008001;3.45e-11;1!UBERON:0007213;3.45e-11;1!UBERON:0009891;3.45e-11;1!UBERON:0007914;3.45e-11;1!UBERON:0007375;3.45e-11;1!UBERON:0003323;3.45e-11;1!UBERON:0010258;3.45e-11;1!UBERON:0005253;3.45e-11;1!UBERON:0007842;3.45e-11;1!UBERON:0002397;3.45e-11;1!UBERON:0003113;3.45e-11;1!UBERON:0003277;3.45e-11;1!UBERON:0001709;3.45e-11;1!UBERON:0002244;3.45e-11;1!UBERON:0005620;3.45e-11;1!UBERON:0010364;3.45e-11;1!UBERON:0004288;3.45e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.27e-21,82;UBERON:0002371,6.22e-20,76;UBERON:0004765,2.63e-19,90;UBERON:0001434,3.49e-17,100;UBERON:0002405,5.70e-16,93;UBERON:0002390,4.60e-15,98;UBERON:0003061,4.60e-15,98;UBERON:0002193,1.70e-13,108;UBERON:0005705,6.00e-11,1;UBERON:0008193,6.00e-11,1;UBERON:0010912,6.00e-11,1;UBERON:0002514,6.00e-11,1;UBERON:0003457,6.00e-11,1;UBERON:0008907,6.00e-11,1;UBERON:0008001,6.00e-11,1;UBERON:0007213,6.00e-11,1;UBERON:0009891,6.00e-11,1;UBERON:0007914,6.00e-11,1;UBERON:0009292,6.00e-11,1;UBERON:0003099,6.00e-11,1;UBERON:0007375,6.00e-11,1;UBERON:0003323,6.00e-11,1;UBERON:0010258,6.00e-11,1;UBERON:0007842,6.00e-11,1;UBERON:0009494,6.00e-11,1;UBERON:0010042,6.00e-11,1;UBERON:0010045,6.00e-11,1;UBERON:0010259,6.00e-11,1;UBERON:0010359,6.00e-11,1;UBERON:0009526,6.00e-11,1;UBERON:0002397,6.00e-11,1;UBERON:0003113,6.00e-11,1;UBERON:0003277,6.00e-11,1;UBERON:0001709,6.00e-11,1;UBERON:0004066,6.00e-11,1;UBERON:0002244,6.00e-11,1;UBERON:0005620,6.00e-11,1;UBERON:0004362,6.00e-11,1;UBERON:0010364,6.00e-11,1;UBERON:0010046,6.00e-11,1;UBERON:0005868,6.00e-11,1;UBERON:0007238,6.00e-11,1;UBERON:0004288,6.00e-11,1;UBERON:0004068,6.00e-11,1;UBERON:0010334,6.00e-11,1;UBERON:0003852,6.00e-11,1;UBERON:0010253,6.00e-11,1;UBERON:0002204,1.86e-09,167;UBERON:0002384,4.95e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,1.66198622559563,0.601633342410425,0.868043482863407,0,0,0,0.872389432677388,0.377875943688809,0.242584061187816,1.16214518452842,0,0,4.89077066947656,2.56160706529101,1.41889337933151,0.344745680736619,1.29096936716765,0,0.941211697713023,0.545812300115692,0,1.22433556948361,0,1.27867425159808,3.29851300186716,1.39624560335142,0,0.870627715885752,0,0,6.78371396193207,5.21482918420201,1.3031330682307,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2016067432247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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10221 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16891 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-45bp_to_BC012441_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_25_at_TRIB1_5end | |||
|id=chr8:126448604..126448616,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.79e-19!45;CL:0002057!1.03e-18!42;CL:0000766!1.77e-15!76;CL:0002009!2.35e-13!65;CL:0002194!5.08e-13!63;CL:0000576!5.08e-13!63;CL:0000040!5.08e-13!63;CL:0000559!5.08e-13!63;CL:0000557!1.96e-11!71;CL:0000839!8.17e-11!70;CL:0000763!3.18e-10!112;CL:0000049!3.18e-10!112;CL:0000738!7.65e-10!140;CL:0002087!7.37e-08!119;CL:0000988!1.67e-07!182;CL:0000037!4.22e-07!172;CL:0000566!4.22e-07!172;CL:0002032!6.13e-07!165;CL:0000837!6.13e-07!165;CL:0000094!9.71e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-37;33!CL:0002057;3.27e-37;33!CL:0000775;1.57e-30;3!CL:0000473;3.66e-27;39!CL:0000234;3.66e-27;39!CL:0000576;1.58e-20;48!CL:0000094;2.43e-20;8!CL:0000081;7.18e-15;11!CL:0000766;7.36e-13;69!CL:0000763;1.04e-10;100!CL:0000738;6.50e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.93e-38,42;CL:0002057,3.93e-38,42;CL:0000766,4.27e-37,72;CL:0000473,3.92e-33,48;CL:0000234,3.92e-33,48;CL:0000775,1.11e-30,3;CL:0002194,3.96e-26,59;CL:0000576,3.96e-26,59;CL:0000040,3.96e-26,59;CL:0000559,3.96e-26,59;CL:0002009,3.18e-25,61;CL:0000763,4.68e-24,108;CL:0000049,4.68e-24,108;CL:0000839,3.38e-23,66;CL:0000557,7.90e-23,67;CL:0000094,1.99e-20,8;CL:0000738,1.23e-18,136;CL:0002032,2.27e-15,161;CL:0000837,2.27e-15,161;CL:0000081,6.22e-15,11;CL:0000037,1.25e-14,168;CL:0000988,9.26e-14,177;CL:0002087,1.46e-12,115;CL:0002031,5.87e-12,120;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-28;42!UBERON:0003099;3.45e-11;1!UBERON:0003852;3.45e-11;1!CL:0000049;6.75e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.27e-11!80;UBERON:0001474!4.74e-11!86;UBERON:0002390!1.60e-10!102;UBERON:0003061!1.60e-10!102;UBERON:0002193!2.37e-09!112;UBERON:0004765!5.80e-08!101;UBERON:0001434!5.80e-08!101;UBERON:0002405!6.41e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;3.45e-11;1!UBERON:0008193;3.45e-11;1!UBERON:0010912;3.45e-11;1!UBERON:0002514;3.45e-11;1!UBERON:0003457;3.45e-11;1!UBERON:0008907;3.45e-11;1!UBERON:0008001;3.45e-11;1!UBERON:0007213;3.45e-11;1!UBERON:0009891;3.45e-11;1!UBERON:0007914;3.45e-11;1!UBERON:0007375;3.45e-11;1!UBERON:0003323;3.45e-11;1!UBERON:0010258;3.45e-11;1!UBERON:0005253;3.45e-11;1!UBERON:0007842;3.45e-11;1!UBERON:0002397;3.45e-11;1!UBERON:0003113;3.45e-11;1!UBERON:0003277;3.45e-11;1!UBERON:0001709;3.45e-11;1!UBERON:0002244;3.45e-11;1!UBERON:0005620;3.45e-11;1!UBERON:0010364;3.45e-11;1!UBERON:0004288;3.45e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.27e-21,82;UBERON:0002371,6.22e-20,76;UBERON:0004765,2.63e-19,90;UBERON:0001434,3.49e-17,100;UBERON:0002405,5.70e-16,93;UBERON:0002390,4.60e-15,98;UBERON:0003061,4.60e-15,98;UBERON:0002193,1.70e-13,108;UBERON:0005705,6.00e-11,1;UBERON:0008193,6.00e-11,1;UBERON:0010912,6.00e-11,1;UBERON:0002514,6.00e-11,1;UBERON:0003457,6.00e-11,1;UBERON:0008907,6.00e-11,1;UBERON:0008001,6.00e-11,1;UBERON:0007213,6.00e-11,1;UBERON:0009891,6.00e-11,1;UBERON:0007914,6.00e-11,1;UBERON:0009292,6.00e-11,1;UBERON:0003099,6.00e-11,1;UBERON:0007375,6.00e-11,1;UBERON:0003323,6.00e-11,1;UBERON:0010258,6.00e-11,1;UBERON:0007842,6.00e-11,1;UBERON:0009494,6.00e-11,1;UBERON:0010042,6.00e-11,1;UBERON:0010045,6.00e-11,1;UBERON:0010259,6.00e-11,1;UBERON:0010359,6.00e-11,1;UBERON:0009526,6.00e-11,1;UBERON:0002397,6.00e-11,1;UBERON:0003113,6.00e-11,1;UBERON:0003277,6.00e-11,1;UBERON:0001709,6.00e-11,1;UBERON:0004066,6.00e-11,1;UBERON:0002244,6.00e-11,1;UBERON:0005620,6.00e-11,1;UBERON:0004362,6.00e-11,1;UBERON:0010364,6.00e-11,1;UBERON:0010046,6.00e-11,1;UBERON:0005868,6.00e-11,1;UBERON:0007238,6.00e-11,1;UBERON:0004288,6.00e-11,1;UBERON:0004068,6.00e-11,1;UBERON:0010334,6.00e-11,1;UBERON:0003852,6.00e-11,1;UBERON:0010253,6.00e-11,1;UBERON:0002204,1.86e-09,167;UBERON:0002384,4.95e-08,371 | |||
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|short_description=p25@TRIB1 | |||
}} |
Revision as of 03:29, 14 September 2013
Short description: | p25@TRIB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_TRIB1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -45bp_to_BC012441_5end |
EntrezGene: | TRIB1 |
HGNC: | 16891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.93e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.93e-38 | 42 |
myeloid leukocyte | 4.27e-37 | 72 |
defensive cell | 3.92e-33 | 48 |
phagocyte | 3.92e-33 | 48 |
neutrophil | 1.11e-30 | 3 |
monopoietic cell | 3.96e-26 | 59 |
monocyte | 3.96e-26 | 59 |
monoblast | 3.96e-26 | 59 |
promonocyte | 3.96e-26 | 59 |
macrophage dendritic cell progenitor | 3.18e-25 | 61 |
myeloid cell | 4.68e-24 | 108 |
common myeloid progenitor | 4.68e-24 | 108 |
myeloid lineage restricted progenitor cell | 3.38e-23 | 66 |
granulocyte monocyte progenitor cell | 7.90e-23 | 67 |
granulocyte | 1.99e-20 | 8 |
leukocyte | 1.23e-18 | 136 |
hematopoietic oligopotent progenitor cell | 2.27e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.27e-15 | 161 |
blood cell | 6.22e-15 | 11 |
hematopoietic stem cell | 1.25e-14 | 168 |
hematopoietic cell | 9.26e-14 | 177 |
nongranular leukocyte | 1.46e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 5.87e-12 | 120 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.