FFCP PHASE1:Mm9::chr3:89048927..89048953,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=360213|HGNC=|MCL_coexpression_id=22|UniProt=D3YXA6|association_with_transcript=0bp_to_ENSMUST00000107464_5end|description=CAGE_peak_5_at_Trim46_5end|id=chr3:89048927..89048953,-|ontology_enrichment_celltype=CL:0000117!7.93e-18!23;CL:0000337!7.93e-18!23;CL:0000540!3.89e-13!33;CL:0000047!3.89e-13!33;CL:0000031!3.89e-13!33;CL:0000404!3.89e-13!33;CL:0000221!4.45e-11!44;CL:0000133!4.45e-11!44;CL:0002319!1.46e-10!43;CL:0000393!1.65e-10!39;CL:0000211!1.65e-10!39;CL:0000055!2.06e-08!50;CL:0002609!3.11e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,5.90e-43,23;CL:0000337,5.90e-43,23;CL:0000540,5.50e-29,33;CL:0000047,5.50e-29,33;CL:0000031,5.50e-29,33;CL:0000404,5.50e-29,33;CL:0000393,4.90e-24,39;CL:0000211,4.90e-24,39;CL:0002319,1.68e-21,43;CL:0002609,4.61e-21,6;CL:0000221,6.11e-21,44;CL:0000133,6.11e-21,44;CL:0002321,1.38e-13,70;CL:0002613,1.92e-12,3;CL:0000120,2.10e-12,3;CL:0002608,1.23e-11,3;CL:0000723,1.93e-08,91;CL:0000048,1.93e-08,91;CL:0002611,8.53e-08,2;CL:0000034,1.03e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.40e-22!52;UBERON:0005068!9.40e-22!52;UBERON:0006241!9.40e-22!52;UBERON:0007135!9.40e-22!52;UBERON:0001017!7.50e-21!73;UBERON:0005743!7.50e-21!73;UBERON:0000073!7.96e-20!75;UBERON:0001016!7.96e-20!75;UBERON:0000033!1.20e-19!63;UBERON:0002346!6.32e-19!71;UBERON:0003075!6.32e-19!71;UBERON:0007284!6.32e-19!71;UBERON:0002616!1.91e-18!49;UBERON:0000955!8.29e-18!50;UBERON:0006238!8.29e-18!50;UBERON:0003056!5.38e-17!49;UBERON:0004121!1.68e-16!102;UBERON:0000924!1.68e-16!102;UBERON:0006601!1.68e-16!102;UBERON:0003080!3.63e-14!40;UBERON:0002780!7.32e-14!39;UBERON:0001890!7.32e-14!39;UBERON:0006240!7.32e-14!39;UBERON:0002020!1.19e-13!34;UBERON:0007811!7.15e-12!86;UBERON:0000153!6.89e-11!94;UBERON:0002791!9.87e-10!29;UBERON:0003528!9.87e-10!29;UBERON:0001893!9.87e-10!29;UBERON:0003076!1.25e-08!12;UBERON:0003057!1.25e-08!12;UBERON:0000956!1.27e-07!21;UBERON:0001869!1.27e-07!21;UBERON:0000203!1.27e-07!21;UBERON:0002240!7.37e-07!6;UBERON:0005174!7.37e-07!6;UBERON:0001137!7.37e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.91e-24,34;UBERON:0001017,2.58e-18,73;UBERON:0001016,1.00e-17,75;UBERON:0001049,6.67e-17,52;UBERON:0005068,6.67e-17,52;UBERON:0006241,6.67e-17,52;UBERON:0007135,6.67e-17,52;UBERON:0000073,4.43e-16,54;UBERON:0003528,5.78e-16,29;UBERON:0002791,5.78e-16,29;UBERON:0001893,5.78e-16,29;UBERON:0002240,1.57e-14,6;UBERON:0005174,1.57e-14,6;UBERON:0001137,1.57e-14,6;UBERON:0004121,3.44e-13,95;UBERON:0000924,3.44e-13,95;UBERON:0006601,3.44e-13,95;UBERON:0002346,3.97e-13,64;UBERON:0003075,3.97e-13,64;UBERON:0007284,3.97e-13,64;UBERON:0000369,1.59e-12,5;UBERON:0002435,1.59e-12,5;UBERON:0000204,1.59e-12,5;UBERON:0010082,1.59e-12,5;UBERON:0001948,1.68e-11,5;UBERON:0002315,1.68e-11,5;UBERON:0002780,2.64e-11,39;UBERON:0001890,2.64e-11,39;UBERON:0006240,2.64e-11,39;UBERON:0010371,4.15e-11,73;UBERON:0003080,5.75e-11,40;UBERON:0000956,9.35e-10,21;UBERON:0001869,9.35e-10,21;UBERON:0000203,9.35e-10,21;UBERON:0002616,3.00e-09,46;UBERON:0000955,5.26e-09,47;UBERON:0006238,5.26e-09,47;UBERON:0001954,1.16e-08,7;UBERON:0003022,1.16e-08,7;UBERON:0002421,1.16e-08,7;UBERON:0000349,1.16e-08,7;UBERON:0002600,1.16e-08,7;UBERON:0003056,1.51e-08,49;UBERON:0010314,3.83e-08,92;UBERON:0002420,7.56e-08,8;UBERON:0007245,7.56e-08,8;UBERON:0010009,7.56e-08,8;UBERON:0010011,7.56e-08,8;UBERON:0000454,7.56e-08,8;UBERON:0002256,8.53e-08,2;UBERON:0003076,3.69e-07,12;UBERON:0003057,3.69e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,3.23706337375356,6.34789175126439,3.80298842103708,0,0.889294796111139,0,0,0,0,0,1.14058573539325,2.56511282830212,1.26194976810829,1.14260393761521,1.32521124570968,1.5923803897944,1.72521847832825,1.83843757322004,1.10115880999389,0.638436690425939,0.153606533256243,4.2203612073662,4.84884511092771,3.64639359389732,0,0,0.45839474333043,0.589257170947335,1.13897344639282,4.84638559145781,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.149790639404823,0,1.50785222535437,0.347648640384553,1.53429274398198,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0,0,0.919608417733892,0.180062129805349,0.30140963567143,0.680364991513279,0.384341160854549,0.374806898238915,0.517406741478031,0,0,0.351902248327898,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.57261530948211,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,0.493647061806363,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0.830298780673413,1.59609949360412,0.682934423016537,0.972426868273176,0,0.551530525350042,0,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.256100609619477,0.459483751644906,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.581385666529314,0.470546902076653,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.474540072496697,0.29551344712669,0,0.464810523557898,0.192906610981141,1.24905288968973,0,0,0.191288332068843,0,0|short_description=p5@Trim46}} | ||
|EntrezGene=360213 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=D3YXA6 | |||
|association_with_transcript=0bp_to_ENSMUST00000107464_5end | |||
|description=CAGE_peak_5_at_Trim46_5end | |||
|id=chr3:89048927..89048953,- | |||
|ontology_enrichment_celltype=CL:0000117!7.93e-18!23;CL:0000337!7.93e-18!23;CL:0000540!3.89e-13!33;CL:0000047!3.89e-13!33;CL:0000031!3.89e-13!33;CL:0000404!3.89e-13!33;CL:0000221!4.45e-11!44;CL:0000133!4.45e-11!44;CL:0002319!1.46e-10!43;CL:0000393!1.65e-10!39;CL:0000211!1.65e-10!39;CL:0000055!2.06e-08!50;CL:0002609!3.11e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.90e-43,23;CL:0000337,5.90e-43,23;CL:0000540,5.50e-29,33;CL:0000047,5.50e-29,33;CL:0000031,5.50e-29,33;CL:0000404,5.50e-29,33;CL:0000393,4.90e-24,39;CL:0000211,4.90e-24,39;CL:0002319,1.68e-21,43;CL:0002609,4.61e-21,6;CL:0000221,6.11e-21,44;CL:0000133,6.11e-21,44;CL:0002321,1.38e-13,70;CL:0002613,1.92e-12,3;CL:0000120,2.10e-12,3;CL:0002608,1.23e-11,3;CL:0000723,1.93e-08,91;CL:0000048,1.93e-08,91;CL:0002611,8.53e-08,2;CL:0000034,1.03e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.40e-22!52;UBERON:0005068!9.40e-22!52;UBERON:0006241!9.40e-22!52;UBERON:0007135!9.40e-22!52;UBERON:0001017!7.50e-21!73;UBERON:0005743!7.50e-21!73;UBERON:0000073!7.96e-20!75;UBERON:0001016!7.96e-20!75;UBERON:0000033!1.20e-19!63;UBERON:0002346!6.32e-19!71;UBERON:0003075!6.32e-19!71;UBERON:0007284!6.32e-19!71;UBERON:0002616!1.91e-18!49;UBERON:0000955!8.29e-18!50;UBERON:0006238!8.29e-18!50;UBERON:0003056!5.38e-17!49;UBERON:0004121!1.68e-16!102;UBERON:0000924!1.68e-16!102;UBERON:0006601!1.68e-16!102;UBERON:0003080!3.63e-14!40;UBERON:0002780!7.32e-14!39;UBERON:0001890!7.32e-14!39;UBERON:0006240!7.32e-14!39;UBERON:0002020!1.19e-13!34;UBERON:0007811!7.15e-12!86;UBERON:0000153!6.89e-11!94;UBERON:0002791!9.87e-10!29;UBERON:0003528!9.87e-10!29;UBERON:0001893!9.87e-10!29;UBERON:0003076!1.25e-08!12;UBERON:0003057!1.25e-08!12;UBERON:0000956!1.27e-07!21;UBERON:0001869!1.27e-07!21;UBERON:0000203!1.27e-07!21;UBERON:0002240!7.37e-07!6;UBERON:0005174!7.37e-07!6;UBERON:0001137!7.37e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.91e-24,34;UBERON:0001017,2.58e-18,73;UBERON:0001016,1.00e-17,75;UBERON:0001049,6.67e-17,52;UBERON:0005068,6.67e-17,52;UBERON:0006241,6.67e-17,52;UBERON:0007135,6.67e-17,52;UBERON:0000073,4.43e-16,54;UBERON:0003528,5.78e-16,29;UBERON:0002791,5.78e-16,29;UBERON:0001893,5.78e-16,29;UBERON:0002240,1.57e-14,6;UBERON:0005174,1.57e-14,6;UBERON:0001137,1.57e-14,6;UBERON:0004121,3.44e-13,95;UBERON:0000924,3.44e-13,95;UBERON:0006601,3.44e-13,95;UBERON:0002346,3.97e-13,64;UBERON:0003075,3.97e-13,64;UBERON:0007284,3.97e-13,64;UBERON:0000369,1.59e-12,5;UBERON:0002435,1.59e-12,5;UBERON:0000204,1.59e-12,5;UBERON:0010082,1.59e-12,5;UBERON:0001948,1.68e-11,5;UBERON:0002315,1.68e-11,5;UBERON:0002780,2.64e-11,39;UBERON:0001890,2.64e-11,39;UBERON:0006240,2.64e-11,39;UBERON:0010371,4.15e-11,73;UBERON:0003080,5.75e-11,40;UBERON:0000956,9.35e-10,21;UBERON:0001869,9.35e-10,21;UBERON:0000203,9.35e-10,21;UBERON:0002616,3.00e-09,46;UBERON:0000955,5.26e-09,47;UBERON:0006238,5.26e-09,47;UBERON:0001954,1.16e-08,7;UBERON:0003022,1.16e-08,7;UBERON:0002421,1.16e-08,7;UBERON:0000349,1.16e-08,7;UBERON:0002600,1.16e-08,7;UBERON:0003056,1.51e-08,49;UBERON:0010314,3.83e-08,92;UBERON:0002420,7.56e-08,8;UBERON:0007245,7.56e-08,8;UBERON:0010009,7.56e-08,8;UBERON:0010011,7.56e-08,8;UBERON:0000454,7.56e-08,8;UBERON:0002256,8.53e-08,2;UBERON:0003076,3.69e-07,12;UBERON:0003057,3.69e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,3.23706337375356,6.34789175126439,3.80298842103708,0,0.889294796111139,0,0,0,0,0,1.14058573539325,2.56511282830212,1.26194976810829,1.14260393761521,1.32521124570968,1.5923803897944,1.72521847832825,1.83843757322004,1.10115880999389,0.638436690425939,0.153606533256243,4.2203612073662,4.84884511092771,3.64639359389732,0,0,0.45839474333043,0.589257170947335,1.13897344639282,4.84638559145781,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.149790639404823,0,1.50785222535437,0.347648640384553,1.53429274398198,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0,0,0.919608417733892,0.180062129805349,0.30140963567143,0.680364991513279,0.384341160854549,0.374806898238915,0.517406741478031,0,0,0.351902248327898,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.57261530948211,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,0.493647061806363,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0.830298780673413,1.59609949360412,0.682934423016537,0.972426868273176,0,0.551530525350042,0,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.256100609619477,0.459483751644906,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.581385666529314,0.470546902076653,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.474540072496697,0.29551344712669,0,0.464810523557898,0.192906610981141,1.24905288968973,0,0,0.191288332068843,0,0 | |||
|short_description=p5@Trim46 | |||
}} |
Revision as of 02:50, 14 September 2013
Short description: | p5@Trim46 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Trim46_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000107464_5end |
EntrezGene: | Trim46 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.90e-43 | 23 |
neuroblast (sensu Vertebrata) | 5.90e-43 | 23 |
neuron | 5.50e-29 | 33 |
neuronal stem cell | 5.50e-29 | 33 |
neuroblast | 5.50e-29 | 33 |
electrically signaling cell | 5.50e-29 | 33 |
electrically responsive cell | 4.90e-24 | 39 |
electrically active cell | 4.90e-24 | 39 |
neural cell | 1.68e-21 | 43 |
neuron of cerebral cortex | 4.61e-21 | 6 |
ectodermal cell | 6.11e-21 | 44 |
neurectodermal cell | 6.11e-21 | 44 |
embryonic cell | 1.38e-13 | 70 |
striatum neuron | 1.92e-12 | 3 |
granule cell | 2.10e-12 | 3 |
hippocampal neuron | 1.23e-11 | 3 |
somatic stem cell | 1.93e-08 | 91 |
multi fate stem cell | 1.93e-08 | 91 |
neuron of the dorsal spinal cord | 8.53e-08 | 2 |
stem cell | 1.03e-07 | 97 |
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