FFCP PHASE1:Mm9::chr3:88004245..88004270,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=87|UniProt=|association_with_transcript=-274bp_to_ENSMUST00000167043_5end|description=CAGE_peak_1_at_ENSMUST00000167043_5end|id=chr3:88004245..88004270,+|ontology_enrichment_celltype=CL:0000117!7.87e-20!23;CL:0000337!7.87e-20!23;CL:0002319!8.69e-17!43;CL:0000221!3.82e-16!44;CL:0000133!3.82e-16!44;CL:0000055!7.33e-13!50;CL:0000540!2.85e-11!33;CL:0000047!2.85e-11!33;CL:0000031!2.85e-11!33;CL:0000404!2.85e-11!33;CL:0000393!2.31e-08!39;CL:0000211!2.31e-08!39;CL:0002453!1.02e-07!8;CL:0000333!8.44e-07!10;CL:0000095!8.44e-07!10;CL:0000243!8.44e-07!10;CL:0000123!8.44e-07!10;CL:0000125!8.44e-07!10;CL:0000030!8.44e-07!10;CL:0000339!8.44e-07!10|ontology_enrichment_celltype_v019_2=CL:0000117,3.44e-27,23;CL:0000337,3.44e-27,23;CL:0002319,2.93e-22,43;CL:0000221,1.51e-21,44;CL:0000133,1.51e-21,44;CL:0000540,7.96e-17,33;CL:0000047,7.96e-17,33;CL:0000031,7.96e-17,33;CL:0000404,7.96e-17,33;CL:0000393,3.33e-13,39;CL:0000211,3.33e-13,39;CL:0002321,2.49e-10,70;CL:0002453,3.13e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.86e-35!73;UBERON:0005743!2.86e-35!73;UBERON:0000073!7.27e-35!75;UBERON:0001016!7.27e-35!75;UBERON:0001049!2.03e-32!52;UBERON:0005068!2.03e-32!52;UBERON:0006241!2.03e-32!52;UBERON:0007135!2.03e-32!52;UBERON:0000955!9.35e-30!50;UBERON:0006238!9.35e-30!50;UBERON:0002616!9.18e-29!49;UBERON:0002020!2.05e-27!34;UBERON:0002791!1.05e-21!29;UBERON:0003528!1.05e-21!29;UBERON:0001893!1.05e-21!29;UBERON:0000033!3.30e-21!63;UBERON:0004121!6.77e-21!102;UBERON:0000924!6.77e-21!102;UBERON:0006601!6.77e-21!102;UBERON:0003080!1.38e-20!40;UBERON:0002346!4.55e-20!71;UBERON:0003075!4.55e-20!71;UBERON:0007284!4.55e-20!71;UBERON:0002780!1.25e-19!39;UBERON:0001890!1.25e-19!39;UBERON:0006240!1.25e-19!39;UBERON:0003056!1.84e-15!49;UBERON:0000956!6.05e-15!21;UBERON:0001869!6.05e-15!21;UBERON:0000203!6.05e-15!21;UBERON:0003076!1.23e-12!12;UBERON:0003057!1.23e-12!12;UBERON:0002619!4.89e-12!17;UBERON:0007811!1.70e-11!86;UBERON:0000153!2.43e-09!94;UBERON:0002021!9.22e-09!10;UBERON:0000411!9.22e-09!10;UBERON:0001950!9.22e-09!10;UBERON:0002420!5.91e-08!8;UBERON:0007245!5.91e-08!8;UBERON:0010009!5.91e-08!8;UBERON:0010011!5.91e-08!8;UBERON:0000454!5.91e-08!8;UBERON:0002240!7.87e-08!6;UBERON:0005174!7.87e-08!6;UBERON:0001137!7.87e-08!6;UBERON:0001948!5.25e-07!5;UBERON:0002315!5.25e-07!5;UBERON:0000025!6.82e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.45e-44,73;UBERON:0001016,1.28e-42,75;UBERON:0000073,1.43e-40,54;UBERON:0001049,1.11e-37,52;UBERON:0005068,1.11e-37,52;UBERON:0006241,1.11e-37,52;UBERON:0007135,1.11e-37,52;UBERON:0002020,1.11e-35,34;UBERON:0004121,1.48e-30,95;UBERON:0000924,1.48e-30,95;UBERON:0006601,1.48e-30,95;UBERON:0000955,3.38e-30,47;UBERON:0006238,3.38e-30,47;UBERON:0002616,6.33e-29,46;UBERON:0002346,2.63e-28,64;UBERON:0003075,2.63e-28,64;UBERON:0007284,2.63e-28,64;UBERON:0003528,7.86e-28,29;UBERON:0002791,7.86e-28,29;UBERON:0001893,7.86e-28,29;UBERON:0003080,1.38e-23,40;UBERON:0010371,2.56e-23,73;UBERON:0002780,2.51e-22,39;UBERON:0001890,2.51e-22,39;UBERON:0006240,2.51e-22,39;UBERON:0000956,1.60e-18,21;UBERON:0001869,1.60e-18,21;UBERON:0000203,1.60e-18,21;UBERON:0003056,1.27e-17,49;UBERON:0010314,4.77e-16,92;UBERON:0003076,7.90e-15,12;UBERON:0003057,7.90e-15,12;UBERON:0002619,1.58e-14,17;UBERON:0000025,9.47e-11,114;UBERON:0002420,1.95e-10,8;UBERON:0007245,1.95e-10,8;UBERON:0010009,1.95e-10,8;UBERON:0010011,1.95e-10,8;UBERON:0000454,1.95e-10,8;UBERON:0002240,2.89e-10,6;UBERON:0005174,2.89e-10,6;UBERON:0001137,2.89e-10,6;UBERON:0002021,1.13e-09,10;UBERON:0000411,1.13e-09,10;UBERON:0001950,1.13e-09,10;UBERON:0004111,2.52e-09,122;UBERON:0001948,3.99e-09,5;UBERON:0002315,3.99e-09,5;UBERON:0011216,1.02e-07,194;UBERON:0000369,4.17e-07,5;UBERON:0002435,4.17e-07,5;UBERON:0000204,4.17e-07,5;UBERON:0010082,4.17e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,11.5553332881637,3.73466510648602,1.36100929351998,1.53985063787899,7.18762821824858,0,0,0,0,0,0,8.9019242778223,9.52183762689659,7.60597684207415,0,0,0,0,0.7104801149461,4.49400165777607,6.14749288514487,2.69592992002042,2.8351247049655,2.10324961351382,28.8507494247842,21.6451170132581,1.83736198822431,1.0543001812006,0,13.2139057199266,6.51205424234457,2.91852413186863,4.3522474950964,2.47016637726506,5.73004707612436,1.95428099300967,6.19038871034848,3.81995619442025,17.3830865429464,19.2201769078789,13.2343606535963,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,4.60782754989601,0,0,0,0,6.44099749440738,2.74500361691176,3.26701315493447,2.08589184230732,1.27857728665165,5.40248915854856,3.0825839982874,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,10.9078889122042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10092241953609,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,5.14114106274891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,4.14292712856459,2.29158205375759,4.81188910562325,2.74033007908257,1.5107877947794,2.02506750069542,2.70192721934532,0.906284817968409,2.5888015587591,0.830298780673413,0.399024873401031,2.21953687480374,0.243106717068294,1.25767897576789,0.919217542250071,1.33348036680969,1.03017528619447,0.320919209591815,1.26348605881899,1.01391719956096,0.565879024158229,0.37456602987953,0.576226371643824,0.804096565378586,0.476293691283074,0.463537303779422,0.964546102318525,1.23625770240992,0.441596760403192,0.342869252385415,1.24233064311536,1.66905332963125,1.45346416632329,1.41164070622996,0.930760686808441,0.365855945745545,1.05227884575137,0.543216455383447,1.12228454331548,0.593175090620871,0.591026894253381,0.818462086339379,1.08455788830176,0.385813221962283,1.24905288968973,0.701794825336225,0.429742108096597,1.14772999241306,0.441182838239031,0.695603506861264|short_description=p1@ENSMUST00000167043}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt= | |||
|association_with_transcript=-274bp_to_ENSMUST00000167043_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000167043_5end | |||
|id=chr3:88004245..88004270,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.87e-20!23;CL:0000337!7.87e-20!23;CL:0002319!8.69e-17!43;CL:0000221!3.82e-16!44;CL:0000133!3.82e-16!44;CL:0000055!7.33e-13!50;CL:0000540!2.85e-11!33;CL:0000047!2.85e-11!33;CL:0000031!2.85e-11!33;CL:0000404!2.85e-11!33;CL:0000393!2.31e-08!39;CL:0000211!2.31e-08!39;CL:0002453!1.02e-07!8;CL:0000333!8.44e-07!10;CL:0000095!8.44e-07!10;CL:0000243!8.44e-07!10;CL:0000123!8.44e-07!10;CL:0000125!8.44e-07!10;CL:0000030!8.44e-07!10;CL:0000339!8.44e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.44e-27,23;CL:0000337,3.44e-27,23;CL:0002319,2.93e-22,43;CL:0000221,1.51e-21,44;CL:0000133,1.51e-21,44;CL:0000540,7.96e-17,33;CL:0000047,7.96e-17,33;CL:0000031,7.96e-17,33;CL:0000404,7.96e-17,33;CL:0000393,3.33e-13,39;CL:0000211,3.33e-13,39;CL:0002321,2.49e-10,70;CL:0002453,3.13e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.86e-35!73;UBERON:0005743!2.86e-35!73;UBERON:0000073!7.27e-35!75;UBERON:0001016!7.27e-35!75;UBERON:0001049!2.03e-32!52;UBERON:0005068!2.03e-32!52;UBERON:0006241!2.03e-32!52;UBERON:0007135!2.03e-32!52;UBERON:0000955!9.35e-30!50;UBERON:0006238!9.35e-30!50;UBERON:0002616!9.18e-29!49;UBERON:0002020!2.05e-27!34;UBERON:0002791!1.05e-21!29;UBERON:0003528!1.05e-21!29;UBERON:0001893!1.05e-21!29;UBERON:0000033!3.30e-21!63;UBERON:0004121!6.77e-21!102;UBERON:0000924!6.77e-21!102;UBERON:0006601!6.77e-21!102;UBERON:0003080!1.38e-20!40;UBERON:0002346!4.55e-20!71;UBERON:0003075!4.55e-20!71;UBERON:0007284!4.55e-20!71;UBERON:0002780!1.25e-19!39;UBERON:0001890!1.25e-19!39;UBERON:0006240!1.25e-19!39;UBERON:0003056!1.84e-15!49;UBERON:0000956!6.05e-15!21;UBERON:0001869!6.05e-15!21;UBERON:0000203!6.05e-15!21;UBERON:0003076!1.23e-12!12;UBERON:0003057!1.23e-12!12;UBERON:0002619!4.89e-12!17;UBERON:0007811!1.70e-11!86;UBERON:0000153!2.43e-09!94;UBERON:0002021!9.22e-09!10;UBERON:0000411!9.22e-09!10;UBERON:0001950!9.22e-09!10;UBERON:0002420!5.91e-08!8;UBERON:0007245!5.91e-08!8;UBERON:0010009!5.91e-08!8;UBERON:0010011!5.91e-08!8;UBERON:0000454!5.91e-08!8;UBERON:0002240!7.87e-08!6;UBERON:0005174!7.87e-08!6;UBERON:0001137!7.87e-08!6;UBERON:0001948!5.25e-07!5;UBERON:0002315!5.25e-07!5;UBERON:0000025!6.82e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.45e-44,73;UBERON:0001016,1.28e-42,75;UBERON:0000073,1.43e-40,54;UBERON:0001049,1.11e-37,52;UBERON:0005068,1.11e-37,52;UBERON:0006241,1.11e-37,52;UBERON:0007135,1.11e-37,52;UBERON:0002020,1.11e-35,34;UBERON:0004121,1.48e-30,95;UBERON:0000924,1.48e-30,95;UBERON:0006601,1.48e-30,95;UBERON:0000955,3.38e-30,47;UBERON:0006238,3.38e-30,47;UBERON:0002616,6.33e-29,46;UBERON:0002346,2.63e-28,64;UBERON:0003075,2.63e-28,64;UBERON:0007284,2.63e-28,64;UBERON:0003528,7.86e-28,29;UBERON:0002791,7.86e-28,29;UBERON:0001893,7.86e-28,29;UBERON:0003080,1.38e-23,40;UBERON:0010371,2.56e-23,73;UBERON:0002780,2.51e-22,39;UBERON:0001890,2.51e-22,39;UBERON:0006240,2.51e-22,39;UBERON:0000956,1.60e-18,21;UBERON:0001869,1.60e-18,21;UBERON:0000203,1.60e-18,21;UBERON:0003056,1.27e-17,49;UBERON:0010314,4.77e-16,92;UBERON:0003076,7.90e-15,12;UBERON:0003057,7.90e-15,12;UBERON:0002619,1.58e-14,17;UBERON:0000025,9.47e-11,114;UBERON:0002420,1.95e-10,8;UBERON:0007245,1.95e-10,8;UBERON:0010009,1.95e-10,8;UBERON:0010011,1.95e-10,8;UBERON:0000454,1.95e-10,8;UBERON:0002240,2.89e-10,6;UBERON:0005174,2.89e-10,6;UBERON:0001137,2.89e-10,6;UBERON:0002021,1.13e-09,10;UBERON:0000411,1.13e-09,10;UBERON:0001950,1.13e-09,10;UBERON:0004111,2.52e-09,122;UBERON:0001948,3.99e-09,5;UBERON:0002315,3.99e-09,5;UBERON:0011216,1.02e-07,194;UBERON:0000369,4.17e-07,5;UBERON:0002435,4.17e-07,5;UBERON:0000204,4.17e-07,5;UBERON:0010082,4.17e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,11.5553332881637,3.73466510648602,1.36100929351998,1.53985063787899,7.18762821824858,0,0,0,0,0,0,8.9019242778223,9.52183762689659,7.60597684207415,0,0,0,0,0.7104801149461,4.49400165777607,6.14749288514487,2.69592992002042,2.8351247049655,2.10324961351382,28.8507494247842,21.6451170132581,1.83736198822431,1.0543001812006,0,13.2139057199266,6.51205424234457,2.91852413186863,4.3522474950964,2.47016637726506,5.73004707612436,1.95428099300967,6.19038871034848,3.81995619442025,17.3830865429464,19.2201769078789,13.2343606535963,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,4.60782754989601,0,0,0,0,6.44099749440738,2.74500361691176,3.26701315493447,2.08589184230732,1.27857728665165,5.40248915854856,3.0825839982874,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,10.9078889122042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10092241953609,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,5.14114106274891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,4.14292712856459,2.29158205375759,4.81188910562325,2.74033007908257,1.5107877947794,2.02506750069542,2.70192721934532,0.906284817968409,2.5888015587591,0.830298780673413,0.399024873401031,2.21953687480374,0.243106717068294,1.25767897576789,0.919217542250071,1.33348036680969,1.03017528619447,0.320919209591815,1.26348605881899,1.01391719956096,0.565879024158229,0.37456602987953,0.576226371643824,0.804096565378586,0.476293691283074,0.463537303779422,0.964546102318525,1.23625770240992,0.441596760403192,0.342869252385415,1.24233064311536,1.66905332963125,1.45346416632329,1.41164070622996,0.930760686808441,0.365855945745545,1.05227884575137,0.543216455383447,1.12228454331548,0.593175090620871,0.591026894253381,0.818462086339379,1.08455788830176,0.385813221962283,1.24905288968973,0.701794825336225,0.429742108096597,1.14772999241306,0.441182838239031,0.695603506861264 | |||
|short_description=p1@ENSMUST00000167043 | |||
}} |
Revision as of 02:45, 14 September 2013
Short description: | p1@ENSMUST00000167043 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000167043_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -274bp_to_ENSMUST00000167043_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.44e-27 | 23 |
neuroblast (sensu Vertebrata) | 3.44e-27 | 23 |
neural cell | 2.93e-22 | 43 |
ectodermal cell | 1.51e-21 | 44 |
neurectodermal cell | 1.51e-21 | 44 |
neuron | 7.96e-17 | 33 |
neuronal stem cell | 7.96e-17 | 33 |
neuroblast | 7.96e-17 | 33 |
electrically signaling cell | 7.96e-17 | 33 |
electrically responsive cell | 3.33e-13 | 39 |
electrically active cell | 3.33e-13 | 39 |
embryonic cell | 2.49e-10 | 70 |
oligodendrocyte precursor cell | 3.13e-08 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.