FFCP PHASE1:Mm9::chr3:87942813..87942826,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=170|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:87942813..87942826,+|id=chr3:87942813..87942826,+|ontology_enrichment_celltype=CL:0000988!2.00e-20!32;CL:0002032!2.00e-20!32;CL:0000037!2.00e-20!32;CL:0000566!2.00e-20!32;CL:0000837!2.00e-20!32;CL:0002031!5.23e-16!25;CL:0002320!2.44e-15!46;CL:0000134!2.44e-15!46;CL:0000219!9.13e-13!54;CL:0000838!5.32e-12!12;CL:0000738!2.83e-11!17;CL:0002087!2.83e-11!17;CL:0000084!5.46e-11!11;CL:0000827!5.46e-11!11;CL:0000049!7.24e-11!19;CL:0000542!1.03e-10!13;CL:0000051!1.03e-10!13;CL:0000063!1.02e-09!66;CL:0000034!2.01e-09!97;CL:0000791!3.18e-09!9;CL:0000789!3.18e-09!9;CL:0002420!3.18e-09!9;CL:0002419!3.18e-09!9;CL:0000790!3.18e-09!9;CL:0000723!1.43e-08!91;CL:0000048!1.43e-08!91;CL:0000763!2.57e-08!16;CL:0000624!3.41e-08!8;CL:0000144!7.97e-07!121;CL:0000012!7.97e-07!121|ontology_enrichment_celltype_v019_2=CL:0000988,9.89e-37,32;CL:0002032,9.89e-37,32;CL:0000037,9.89e-37,32;CL:0000837,9.89e-37,32;CL:0002031,4.15e-26,25;CL:0002320,2.37e-24,46;CL:0000134,2.37e-24,46;CL:0000838,2.81e-21,12;CL:0000219,3.74e-20,54;CL:0000542,1.60e-19,13;CL:0000051,1.60e-19,13;CL:0000084,2.76e-18,11;CL:0000827,2.76e-18,11;CL:0000049,4.22e-18,19;CL:0000738,1.44e-14,17;CL:0002087,1.44e-14,17;CL:0000034,2.49e-13,97;CL:0000791,4.47e-13,9;CL:0000789,4.47e-13,9;CL:0002420,4.47e-13,9;CL:0002419,4.47e-13,9;CL:0000790,4.47e-13,9;CL:0000050,1.06e-11,9;CL:0000763,2.43e-11,16;CL:0000723,2.52e-10,91;CL:0000048,2.52e-10,91;CL:0000624,2.93e-10,8;CL:0000553,1.90e-08,6;CL:0000556,1.90e-08,6;CL:0000839,6.16e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.76e-20!48;UBERON:0002390!1.93e-19!45;UBERON:0003061!1.93e-19!45;UBERON:0002384!2.44e-15!46;UBERON:0002405!1.66e-12!70;UBERON:0004177!4.66e-12!29;UBERON:0002370!5.43e-12!23;UBERON:0000974!5.43e-12!23;UBERON:0004807!5.43e-12!23;UBERON:0005058!5.43e-12!23;UBERON:0003351!5.43e-12!23;UBERON:0009113!5.43e-12!23;UBERON:0003295!5.43e-12!23;UBERON:0009722!5.43e-12!23;UBERON:0005562!5.43e-12!23;UBERON:0007690!5.43e-12!23;UBERON:0000072!1.76e-11!27;UBERON:0006562!3.42e-11!24;UBERON:0003408!3.42e-11!24;UBERON:0001557!3.42e-11!24;UBERON:0001042!3.42e-11!24;UBERON:0008814!3.42e-11!24;UBERON:0009145!3.42e-11!24;UBERON:0001474!1.55e-09!22;UBERON:0004765!1.55e-09!22;UBERON:0001434!1.55e-09!22;UBERON:0003081!1.66e-09!88;UBERON:0000063!1.10e-08!35;UBERON:0000065!1.43e-08!41;UBERON:0001004!3.63e-08!42;UBERON:0002371!3.67e-08!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.37e-24,46;UBERON:0002390,3.08e-11,45;UBERON:0003061,3.08e-11,45;UBERON:0002193,2.31e-10,48;UBERON:0002405,2.31e-10,48;UBERON:0002370,7.08e-08,23;UBERON:0000974,7.08e-08,23;UBERON:0004807,7.08e-08,23;UBERON:0005058,7.08e-08,23;UBERON:0003351,7.08e-08,23;UBERON:0009113,7.08e-08,23;UBERON:0003295,7.08e-08,23;UBERON:0009722,7.08e-08,23;UBERON:0005562,7.08e-08,23;UBERON:0007690,7.08e-08,23;UBERON:0006562,1.69e-07,24;UBERON:0003408,1.69e-07,24;UBERON:0001557,1.69e-07,24;UBERON:0001042,1.69e-07,24;UBERON:0008814,1.69e-07,24;UBERON:0009145,1.69e-07,24|phase1_expression=0.160148847104794,0,0,0,0,0,0,4.26106967357202,0.985521055061667,1.40438715793196,0.513653904676515,0.8774937489487,1.88320802924326,2.09808965805594,0.666219523631325,1.01237633694913,0,1.73504190947031,1.37114433605739,2.97072756258621,0.0850432901510698,1.78723712161594,2.08959831311148,0.639969691173627,0,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0,0,4.36234775750115,13.0565185562042,20.1656279485478,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,2.15667224110656,4.79922184794726,1.01656181658452,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,3.51106593656617,2.05878325691772,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0.289298117163023,0,0.54390568381871,0,0,0.160550589987792,0,0,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.2143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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=170 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:87942813..87942826,+ | |||
|id=chr3:87942813..87942826,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.00e-20!32;CL:0002032!2.00e-20!32;CL:0000037!2.00e-20!32;CL:0000566!2.00e-20!32;CL:0000837!2.00e-20!32;CL:0002031!5.23e-16!25;CL:0002320!2.44e-15!46;CL:0000134!2.44e-15!46;CL:0000219!9.13e-13!54;CL:0000838!5.32e-12!12;CL:0000738!2.83e-11!17;CL:0002087!2.83e-11!17;CL:0000084!5.46e-11!11;CL:0000827!5.46e-11!11;CL:0000049!7.24e-11!19;CL:0000542!1.03e-10!13;CL:0000051!1.03e-10!13;CL:0000063!1.02e-09!66;CL:0000034!2.01e-09!97;CL:0000791!3.18e-09!9;CL:0000789!3.18e-09!9;CL:0002420!3.18e-09!9;CL:0002419!3.18e-09!9;CL:0000790!3.18e-09!9;CL:0000723!1.43e-08!91;CL:0000048!1.43e-08!91;CL:0000763!2.57e-08!16;CL:0000624!3.41e-08!8;CL:0000144!7.97e-07!121;CL:0000012!7.97e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.89e-37,32;CL:0002032,9.89e-37,32;CL:0000037,9.89e-37,32;CL:0000837,9.89e-37,32;CL:0002031,4.15e-26,25;CL:0002320,2.37e-24,46;CL:0000134,2.37e-24,46;CL:0000838,2.81e-21,12;CL:0000219,3.74e-20,54;CL:0000542,1.60e-19,13;CL:0000051,1.60e-19,13;CL:0000084,2.76e-18,11;CL:0000827,2.76e-18,11;CL:0000049,4.22e-18,19;CL:0000738,1.44e-14,17;CL:0002087,1.44e-14,17;CL:0000034,2.49e-13,97;CL:0000791,4.47e-13,9;CL:0000789,4.47e-13,9;CL:0002420,4.47e-13,9;CL:0002419,4.47e-13,9;CL:0000790,4.47e-13,9;CL:0000050,1.06e-11,9;CL:0000763,2.43e-11,16;CL:0000723,2.52e-10,91;CL:0000048,2.52e-10,91;CL:0000624,2.93e-10,8;CL:0000553,1.90e-08,6;CL:0000556,1.90e-08,6;CL:0000839,6.16e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.76e-20!48;UBERON:0002390!1.93e-19!45;UBERON:0003061!1.93e-19!45;UBERON:0002384!2.44e-15!46;UBERON:0002405!1.66e-12!70;UBERON:0004177!4.66e-12!29;UBERON:0002370!5.43e-12!23;UBERON:0000974!5.43e-12!23;UBERON:0004807!5.43e-12!23;UBERON:0005058!5.43e-12!23;UBERON:0003351!5.43e-12!23;UBERON:0009113!5.43e-12!23;UBERON:0003295!5.43e-12!23;UBERON:0009722!5.43e-12!23;UBERON:0005562!5.43e-12!23;UBERON:0007690!5.43e-12!23;UBERON:0000072!1.76e-11!27;UBERON:0006562!3.42e-11!24;UBERON:0003408!3.42e-11!24;UBERON:0001557!3.42e-11!24;UBERON:0001042!3.42e-11!24;UBERON:0008814!3.42e-11!24;UBERON:0009145!3.42e-11!24;UBERON:0001474!1.55e-09!22;UBERON:0004765!1.55e-09!22;UBERON:0001434!1.55e-09!22;UBERON:0003081!1.66e-09!88;UBERON:0000063!1.10e-08!35;UBERON:0000065!1.43e-08!41;UBERON:0001004!3.63e-08!42;UBERON:0002371!3.67e-08!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.37e-24,46;UBERON:0002390,3.08e-11,45;UBERON:0003061,3.08e-11,45;UBERON:0002193,2.31e-10,48;UBERON:0002405,2.31e-10,48;UBERON:0002370,7.08e-08,23;UBERON:0000974,7.08e-08,23;UBERON:0004807,7.08e-08,23;UBERON:0005058,7.08e-08,23;UBERON:0003351,7.08e-08,23;UBERON:0009113,7.08e-08,23;UBERON:0003295,7.08e-08,23;UBERON:0009722,7.08e-08,23;UBERON:0005562,7.08e-08,23;UBERON:0007690,7.08e-08,23;UBERON:0006562,1.69e-07,24;UBERON:0003408,1.69e-07,24;UBERON:0001557,1.69e-07,24;UBERON:0001042,1.69e-07,24;UBERON:0008814,1.69e-07,24;UBERON:0009145,1.69e-07,24 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,4.26106967357202,0.985521055061667,1.40438715793196,0.513653904676515,0.8774937489487,1.88320802924326,2.09808965805594,0.666219523631325,1.01237633694913,0,1.73504190947031,1.37114433605739,2.97072756258621,0.0850432901510698,1.78723712161594,2.08959831311148,0.639969691173627,0,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0,0,4.36234775750115,13.0565185562042,20.1656279485478,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,2.15667224110656,4.79922184794726,1.01656181658452,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,3.51106593656617,2.05878325691772,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0.289298117163023,0,0.54390568381871,0,0,0.160550589987792,0,0,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,1.35982743995084,2.23922323717853,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0,0,0,2.52808896502543,0,0.308132871494482,0.389762468933385,1.07416017400489,0.79472541912506,0.841368146639782,0.738447635872886,2.1202954489111,0.990688486514998,0.907435666231565,0.779663045918019,2.30908419936791,4.20756847853648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr3:87942813..87942826,+ | |||
}} |
Revision as of 02:44, 14 September 2013
Short description: | p@chr3:87942813..87942826, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:87942813..87942826, + |
Coexpression cluster: | MCL_coexpression_mm9:170 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.37e-24 | 46 |
hematopoietic system | 3.08e-11 | 45 |
blood island | 3.08e-11 | 45 |
hemolymphoid system | 2.31e-10 | 48 |
immune system | 2.31e-10 | 48 |
thymus | 7.08e-08 | 23 |
neck | 7.08e-08 | 23 |
respiratory system epithelium | 7.08e-08 | 23 |
hemolymphoid system gland | 7.08e-08 | 23 |
pharyngeal epithelium | 7.08e-08 | 23 |
thymic region | 7.08e-08 | 23 |
pharyngeal gland | 7.08e-08 | 23 |
entire pharyngeal arch endoderm | 7.08e-08 | 23 |
thymus primordium | 7.08e-08 | 23 |
early pharyngeal endoderm | 7.08e-08 | 23 |
pharynx | 1.69e-07 | 24 |
gland of gut | 1.69e-07 | 24 |
upper respiratory tract | 1.69e-07 | 24 |
chordate pharynx | 1.69e-07 | 24 |
pharyngeal arch system | 1.69e-07 | 24 |
pharyngeal region of foregut | 1.69e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.