FFCP PHASE1:Mm9::chr3:146259552..146259575,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56629|HGNC=|MCL_coexpression_id=8|UniProt=Q9QY48|association_with_transcript=0bp_to_ENSMUST00000029836,ENSMUST00000164352,uc008rrn.2_5end|description=CAGE_peak_2_at_Dnase2b_5end|id=chr3:146259552..146259575,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,6.16e-10,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.54e-22!22;UBERON:0007499!1.54e-22!22;UBERON:0006925!1.54e-22!22;UBERON:0009497!1.54e-22!22;UBERON:0000015!1.54e-22!22;UBERON:0002423!1.54e-22!22;UBERON:0006235!1.54e-22!22;UBERON:0008835!1.54e-22!22;UBERON:0003894!1.54e-22!22;UBERON:0004161!1.54e-22!22;UBERON:0008836!1.54e-22!22;UBERON:0009854!3.04e-21!23;UBERON:0009856!3.04e-21!23;UBERON:0002365!5.72e-19!25;UBERON:0002330!5.72e-19!25;UBERON:0005172!2.84e-12!49;UBERON:0005173!2.84e-12!49;UBERON:0002417!2.84e-12!49;UBERON:0000916!2.84e-12!49;UBERON:0005256!3.29e-11!47;UBERON:0003914!9.33e-08!47;UBERON:0002368!3.41e-07!60;UBERON:0009569!4.26e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.56e-43,22;UBERON:0007499,7.56e-43,22;UBERON:0006925,7.56e-43,22;UBERON:0009497,7.56e-43,22;UBERON:0000015,7.56e-43,22;UBERON:0002423,7.56e-43,22;UBERON:0006235,7.56e-43,22;UBERON:0008835,7.56e-43,22;UBERON:0003894,7.56e-43,22;UBERON:0004161,7.56e-43,22;UBERON:0008836,7.56e-43,22;UBERON:0009854,8.57e-41,23;UBERON:0009856,8.57e-41,23;UBERON:0002365,3.54e-37,25;UBERON:0002330,3.54e-37,25;UBERON:0005256,1.09e-18,45;UBERON:0003914,1.04e-17,47;UBERON:0005172,8.34e-17,49;UBERON:0005173,8.34e-17,49;UBERON:0002417,8.34e-17,49;UBERON:0000916,8.34e-17,49;UBERON:0003929,1.71e-14,55;UBERON:0002368,6.38e-13,60;UBERON:0003104,1.23e-12,61;UBERON:0009142,1.23e-12,61;UBERON:0002530,1.36e-11,65;UBERON:0000490,2.37e-11,66;UBERON:0009569,2.37e-11,66;UBERON:0005911,1.14e-10,69;UBERON:0000949,4.79e-10,72;UBERON:0005177,8.89e-09,79;UBERON:0001041,1.29e-08,80;UBERON:0002100,3.44e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7897491705719,9.51959867190851,23.746940432064,33.7883737072788,29.5697745484241,5.47733238513832,0,0,0,0,0,0,0,0,0,0,11.3042040921869,0,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0.229902104433473,0,0.60281927134286,0.272145996605311,0.12811372028485,0.281105173679186,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0.123397163921801,21.3445891502747,0,0.196558995113203,1.34917267430912,1.01430060694251,3.61765739628625,5.85639459097266,14.0971107350897,4.37765112292595,3.56929837144506,7.18841032636773,8.93138274404408,7.17686648163489,9.34541848404313,16.6839594575378,37.1481511449793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.743881101528023,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919217542250071,1.33348036680969,0.824140228955577,0.64183841918363,1.01078884705519,0.25347929989024,0.943131706930381,0.561849044819294,0.576226371643824,0.746661096422973,2.38146845641537,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,1.24233064311536,1.1921809497366,1.30811774969096,0.564656282491984,0.592302255241736,0.182927972872773,0.263069711437843,1.08643291076689,1.68342681497322,0.593175090620871,0.591026894253381,1.63692417267876,2.01417893541756,0.771626443924566,0,1.16965804222704,0.214871054048298,0,0,0.231867835620421|short_description=p2@Dnase2b}} | ||
|EntrezGene=56629 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q9QY48 | |||
|association_with_transcript=0bp_to_ENSMUST00000029836,ENSMUST00000164352,uc008rrn.2_5end | |||
|description=CAGE_peak_2_at_Dnase2b_5end | |||
|id=chr3:146259552..146259575,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.16e-10,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.54e-22!22;UBERON:0007499!1.54e-22!22;UBERON:0006925!1.54e-22!22;UBERON:0009497!1.54e-22!22;UBERON:0000015!1.54e-22!22;UBERON:0002423!1.54e-22!22;UBERON:0006235!1.54e-22!22;UBERON:0008835!1.54e-22!22;UBERON:0003894!1.54e-22!22;UBERON:0004161!1.54e-22!22;UBERON:0008836!1.54e-22!22;UBERON:0009854!3.04e-21!23;UBERON:0009856!3.04e-21!23;UBERON:0002365!5.72e-19!25;UBERON:0002330!5.72e-19!25;UBERON:0005172!2.84e-12!49;UBERON:0005173!2.84e-12!49;UBERON:0002417!2.84e-12!49;UBERON:0000916!2.84e-12!49;UBERON:0005256!3.29e-11!47;UBERON:0003914!9.33e-08!47;UBERON:0002368!3.41e-07!60;UBERON:0009569!4.26e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.56e-43,22;UBERON:0007499,7.56e-43,22;UBERON:0006925,7.56e-43,22;UBERON:0009497,7.56e-43,22;UBERON:0000015,7.56e-43,22;UBERON:0002423,7.56e-43,22;UBERON:0006235,7.56e-43,22;UBERON:0008835,7.56e-43,22;UBERON:0003894,7.56e-43,22;UBERON:0004161,7.56e-43,22;UBERON:0008836,7.56e-43,22;UBERON:0009854,8.57e-41,23;UBERON:0009856,8.57e-41,23;UBERON:0002365,3.54e-37,25;UBERON:0002330,3.54e-37,25;UBERON:0005256,1.09e-18,45;UBERON:0003914,1.04e-17,47;UBERON:0005172,8.34e-17,49;UBERON:0005173,8.34e-17,49;UBERON:0002417,8.34e-17,49;UBERON:0000916,8.34e-17,49;UBERON:0003929,1.71e-14,55;UBERON:0002368,6.38e-13,60;UBERON:0003104,1.23e-12,61;UBERON:0009142,1.23e-12,61;UBERON:0002530,1.36e-11,65;UBERON:0000490,2.37e-11,66;UBERON:0009569,2.37e-11,66;UBERON:0005911,1.14e-10,69;UBERON:0000949,4.79e-10,72;UBERON:0005177,8.89e-09,79;UBERON:0001041,1.29e-08,80;UBERON:0002100,3.44e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7897491705719,9.51959867190851,23.746940432064,33.7883737072788,29.5697745484241,5.47733238513832,0,0,0,0,0,0,0,0,0,0,11.3042040921869,0,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0.229902104433473,0,0.60281927134286,0.272145996605311,0.12811372028485,0.281105173679186,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0.123397163921801,21.3445891502747,0,0.196558995113203,1.34917267430912,1.01430060694251,3.61765739628625,5.85639459097266,14.0971107350897,4.37765112292595,3.56929837144506,7.18841032636773,8.93138274404408,7.17686648163489,9.34541848404313,16.6839594575378,37.1481511449793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.743881101528023,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919217542250071,1.33348036680969,0.824140228955577,0.64183841918363,1.01078884705519,0.25347929989024,0.943131706930381,0.561849044819294,0.576226371643824,0.746661096422973,2.38146845641537,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,1.24233064311536,1.1921809497366,1.30811774969096,0.564656282491984,0.592302255241736,0.182927972872773,0.263069711437843,1.08643291076689,1.68342681497322,0.593175090620871,0.591026894253381,1.63692417267876,2.01417893541756,0.771626443924566,0,1.16965804222704,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p2@Dnase2b | |||
}} |
Revision as of 01:47, 14 September 2013
Short description: | p2@Dnase2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dnase2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000029836, ENSMUST00000164352, uc008rrn.2_5end |
EntrezGene: | Dnase2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.16e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 7.56e-43 | 22 |
epithelial sac | 7.56e-43 | 22 |
digestive gland | 7.56e-43 | 22 |
epithelium of foregut-midgut junction | 7.56e-43 | 22 |
anatomical boundary | 7.56e-43 | 22 |
hepatobiliary system | 7.56e-43 | 22 |
foregut-midgut junction | 7.56e-43 | 22 |
hepatic diverticulum | 7.56e-43 | 22 |
liver primordium | 7.56e-43 | 22 |
septum transversum | 7.56e-43 | 22 |
liver bud | 7.56e-43 | 22 |
digestive tract diverticulum | 8.57e-41 | 23 |
sac | 8.57e-41 | 23 |
exocrine gland | 3.54e-37 | 25 |
exocrine system | 3.54e-37 | 25 |
trunk mesenchyme | 1.09e-18 | 45 |
epithelial tube | 1.04e-17 | 47 |
abdomen element | 8.34e-17 | 49 |
abdominal segment element | 8.34e-17 | 49 |
abdominal segment of trunk | 8.34e-17 | 49 |
abdomen | 8.34e-17 | 49 |
gut epithelium | 1.71e-14 | 55 |
endocrine gland | 6.38e-13 | 60 |
mesenchyme | 1.23e-12 | 61 |
entire embryonic mesenchyme | 1.23e-12 | 61 |
gland | 1.36e-11 | 65 |
unilaminar epithelium | 2.37e-11 | 66 |
subdivision of trunk | 2.37e-11 | 66 |
endo-epithelium | 1.14e-10 | 69 |
endocrine system | 4.79e-10 | 72 |
trunk region element | 8.89e-09 | 79 |
foregut | 1.29e-08 | 80 |
trunk | 3.44e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.