FFCP PHASE1:Hg19::chr7:54879626..54879647,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C418|description=CAGE_peak_at_chr7:54879626..54879647,-|id=chr7:54879626..54879647,-|ontology_enrichment_celltype=CL:0002622!3.51e-10!3;CL:0002150!6.18e-10!3;CL:0000861!6.18e-10!3;CL:0002195!7.35e-08!2;CL:0002571!7.35e-08!2;CL:0002575!2.09e-07!2|ontology_enrichment_celltype_v019=CL:0002195;3.05e-25;2!CL:0002571;3.05e-25;2|ontology_enrichment_celltype_v019_2=CL:0002195,3.45e-25,2;CL:0002571,3.45e-25,2|ontology_enrichment_development_v019=UBERON:0008947;5.09e-34;29!UBERON:0003099;1.61e-13;1!UBERON:0003852;1.61e-13;1!UBERON:0006595;8.95e-08;86|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.23e-10,106;DOID:0050687,1.48e-07,143|ontology_enrichment_uberon=UBERON:0001737!1.65e-30!9;UBERON:0001557!2.01e-13!19;UBERON:0003104!1.60e-08!238;UBERON:0009142!1.60e-08!238;UBERON:0004921!2.27e-08!129;UBERON:0004185!2.27e-08!129;UBERON:0004089!9.27e-08!2;UBERON:0001007!1.72e-07!155;UBERON:0001555!1.72e-07!155;UBERON:0007026!1.72e-07!155;UBERON:0000077!1.76e-07!130;UBERON:0000481!4.13e-07!347;UBERON:0004119!4.39e-07!169;UBERON:0000925!4.39e-07!169;UBERON:0006595!4.39e-07!169|ontology_enrichment_uberon_v019=UBERON:0001737;2.82e-111;9!UBERON:0001557;2.82e-111;9!UBERON:0000072;1.07e-24;37!UBERON:0000065;8.25e-21;44!UBERON:0005705;1.61e-13;1!UBERON:0008193;1.61e-13;1!UBERON:0010912;1.61e-13;1!UBERON:0002514;1.61e-13;1!UBERON:0003457;1.61e-13;1!UBERON:0008907;1.61e-13;1!UBERON:0008001;1.61e-13;1!UBERON:0007213;1.61e-13;1!UBERON:0009891;1.61e-13;1!UBERON:0007914;1.61e-13;1!UBERON:0007375;1.61e-13;1!UBERON:0003323;1.61e-13;1!UBERON:0010258;1.61e-13;1!UBERON:0005253;1.61e-13;1!UBERON:0007842;1.61e-13;1!UBERON:0002397;1.61e-13;1!UBERON:0003113;1.61e-13;1!UBERON:0003277;1.61e-13;1!UBERON:0001709;1.61e-13;1!UBERON:0002244;1.61e-13;1!UBERON:0005620;1.61e-13;1!UBERON:0010364;1.61e-13;1!UBERON:0004288;1.61e-13;1!UBERON:0001004;2.67e-12;65!UBERON:0004089;2.12e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.83e-111,9;UBERON:0001557,2.39e-52,19;UBERON:0008947,9.34e-26,38;UBERON:0003258,9.34e-26,38;UBERON:0000072,1.20e-20,47;UBERON:0001041,3.85e-19,87;UBERON:0001004,4.59e-19,74;UBERON:0000065,7.56e-18,54;UBERON:0004921,3.76e-16,118;UBERON:0001007,4.68e-15,145;UBERON:0001555,4.68e-15,145;UBERON:0007026,4.68e-15,145;UBERON:0004119,1.71e-13,160;UBERON:0000925,1.71e-13,160;UBERON:0006595,1.71e-13,160;UBERON:0005705,2.07e-13,1;UBERON:0008193,2.07e-13,1;UBERON:0010912,2.07e-13,1;UBERON:0002514,2.07e-13,1;UBERON:0003457,2.07e-13,1;UBERON:0008907,2.07e-13,1;UBERON:0008001,2.07e-13,1;UBERON:0007213,2.07e-13,1;UBERON:0009891,2.07e-13,1;UBERON:0007914,2.07e-13,1;UBERON:0009292,2.07e-13,1;UBERON:0003099,2.07e-13,1;UBERON:0007375,2.07e-13,1;UBERON:0003323,2.07e-13,1;UBERON:0010258,2.07e-13,1;UBERON:0007842,2.07e-13,1;UBERON:0009494,2.07e-13,1;UBERON:0010042,2.07e-13,1;UBERON:0010045,2.07e-13,1;UBERON:0010259,2.07e-13,1;UBERON:0010359,2.07e-13,1;UBERON:0009526,2.07e-13,1;UBERON:0002397,2.07e-13,1;UBERON:0003113,2.07e-13,1;UBERON:0003277,2.07e-13,1;UBERON:0001709,2.07e-13,1;UBERON:0004066,2.07e-13,1;UBERON:0002244,2.07e-13,1;UBERON:0005620,2.07e-13,1;UBERON:0004362,2.07e-13,1;UBERON:0010364,2.07e-13,1;UBERON:0010046,2.07e-13,1;UBERON:0005868,2.07e-13,1;UBERON:0007238,2.07e-13,1;UBERON:0004288,2.07e-13,1;UBERON:0004068,2.07e-13,1;UBERON:0010334,2.07e-13,1;UBERON:0003852,2.07e-13,1;UBERON:0010253,2.07e-13,1;UBERON:0011216,1.37e-10,223;UBERON:0001048,4.54e-08,160;UBERON:0005253,2.40e-07,2;UBERON:0004089,2.40e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73227200159376,4.38320194203064,4.57920956778616,5.84558055481688,5.01122721412534,3.55905928666645,6.74156540800822,5.29797955838434,6.92544882503503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0.26593811658487,0,0,0,0,1.14382394926518,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.546273504020151,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13783657248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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C418 | |||
|description=CAGE_peak_at_chr7:54879626..54879647,- | |||
|id=chr7:54879626..54879647,- | |||
|ontology_enrichment_celltype=CL:0002622!3.51e-10!3;CL:0002150!6.18e-10!3;CL:0000861!6.18e-10!3;CL:0002195!7.35e-08!2;CL:0002571!7.35e-08!2;CL:0002575!2.09e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002195;3.05e-25;2!CL:0002571;3.05e-25;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,3.45e-25,2;CL:0002571,3.45e-25,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.09e-34;29!UBERON:0003099;1.61e-13;1!UBERON:0003852;1.61e-13;1!UBERON:0006595;8.95e-08;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.23e-10,106;DOID:0050687,1.48e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.65e-30!9;UBERON:0001557!2.01e-13!19;UBERON:0003104!1.60e-08!238;UBERON:0009142!1.60e-08!238;UBERON:0004921!2.27e-08!129;UBERON:0004185!2.27e-08!129;UBERON:0004089!9.27e-08!2;UBERON:0001007!1.72e-07!155;UBERON:0001555!1.72e-07!155;UBERON:0007026!1.72e-07!155;UBERON:0000077!1.76e-07!130;UBERON:0000481!4.13e-07!347;UBERON:0004119!4.39e-07!169;UBERON:0000925!4.39e-07!169;UBERON:0006595!4.39e-07!169 | |||
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|short_description=p@chr7:54879626..54879647,- | |||
}} |
Revision as of 01:36, 14 September 2013
Short description: | p@chr7:54879626..54879647, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:54879626..54879647, - |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 3.45e-25 | 2 |
hepatic mesenchymal stem cell | 3.45e-25 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.23e-10 | 106 |
cell type cancer | 1.48e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.