Personal tools

FFCP PHASE1:Mm9::chr3:122122690..122122705,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=29815|HGNC=|MCL_coexpression_id=24|UniProt=Q9QZK2|association_with_transcript=0bp_to_ENSMUST00000029766,NM_013867,uc008req.2_5end|description=CAGE_peak_2_at_Bcar3_5end|id=chr3:122122690..122122705,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.46e-10!43;UBERON:0005409!3.73e-09!59;UBERON:0004119!8.67e-08!130;UBERON:0000925!8.67e-08!130;UBERON:0006595!8.67e-08!130;UBERON:0004923!9.26e-08!24;UBERON:0001007!3.79e-07!128;UBERON:0001555!3.79e-07!128;UBERON:0007026!3.79e-07!128;UBERON:0000344!4.40e-07!15;UBERON:0009569!9.27e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.46e-14,31;UBERON:0005409,2.58e-11,47;UBERON:0004119,1.51e-08,118;UBERON:0000925,1.51e-08,118;UBERON:0006595,1.51e-08,118;UBERON:0001007,7.43e-08,116;UBERON:0001555,7.43e-08,116;UBERON:0007026,7.43e-08,116;UBERON:0004923,1.12e-07,24;UBERON:0000344,3.07e-07,15;UBERON:0004921,3.62e-07,114|phase1_expression=2.88267924788629,65.2584012285605,59.6049003600292,98.9057970973334,135.241847085514,8.2260843236826,3.27057696833736,0.258246646883153,0,0.234064526321993,0,0,0,0,1.99865857089398,1.01237633694913,0,9.93705820878449,10.5578113876419,14.429248161133,2.63634199468316,0,0,8.63959083084396,9.1763712426868,36.1766137392463,26.2764817657036,18.7459972436723,22.4227634958521,20.6664706403143,10.199603490144,0,0,0,1.73310971850765,2.32728503501889,1.42918549383658,1.25559489221072,1.5626706890476,3.66466620781659,2.94115744015507,2.73218193983378,2.42755176515577,1.51076181570693,1.11514624341466,0,0,2.8343270329458,2.63623419281366,1.55543919259427,1.67983705950435,2.87505128729943,15.939347575485,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,0.528990979272033,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0.7104801149461,2.39680088414724,3.84218305321555,0.414758449233911,0.135005938331691,0.420649922702764,0,0.441737081903227,0.122490799214954,0,0,0,0.510749352340751,0.307213066512487,1.05509030184155,0.457438218012048,2.08365348222704,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,0.186399445825301,0.37863096666592,1.20914496170857,2.02905142091174,2.58127163094416,1.3599426674155,4.31762553310254,4.54843492213368,4.92829575807069,4.35377702408431,1.02258193546835,0.779358013808606,1.41335829804136,1.97180787687353,0,0,0,5.62876706629157,2.78695852022608,3.0331466700887,8.33542321949138,6.99132285847364,3.56261133755579,1.04091196059682,2.13125834818499,2.07553947530453,1.3565037649736,1.99900802130698,3.51866455723091,10.1349936771093,2.74738778147832,0,2.42650274921114,2.65009822152472,2.42437626567611,0,1.17112318804619,1.67557365450764,23.757506134399,0.239630249011841,0,0.254140454146129,1.64769703345305,0.457500602818626,0.376963056338593,1.39059456153821,1.27857728665165,0.62336413367868,1.1356888414743,2.03678727700633,2.98576729464223,2.27450482590307,2.10441855886474,0.910843100738926,0.689706313300419,0.720248519221397,1.9591626318643,1.76894897793452,2.3060469651273,1.40552586839593,3.10444044886819,0.646703978798527,1.32374256117473,1.40760899331159,1.53437012699302,1.66828349535359,0.348252166522167,2.26360350048738,2.9855140022774,0,0,0.284163499395593,1.03562886267751,0.234526059981096,0.540186184383045,0,0.787056926989615,0.154267112887378,0.465067889500816,1.3413670069981,0.467061369468678,0,1.31333971263276,2.02672023864639,1.02339991197733,1.75640092232841,2.28150911892632,0.630869845692382,0.720332286654991,37.667741260153,20.0982430664294,4.69234151177515,3.0190767341857,3.47942145569652,5.64713868945359,5.78182913996663,8.94060442729028,33.2170343081158,13.3406153326449,16.0854533632172,14.523822459004,15.2071987952914,24.268124033664,19.6685625385972,21.1089749649629,0.948339504765408,0.913988100877831,3.38123207019241,1.62921062276251,1.35766741017338,2.10407459670956,2.65593455921881,3.09981310757165,2.82597710114475,4.81248939295022,5.63259991465583,0.667380422864376,0.589676985339609,0.449724224769707,0.405720242777006,1.4470629585145,2.29163266603278,2.87696137450811,2.2698931748505,4.11842119782122,5.75072826109418,3.72140947668503,4.05648975048929,4.54641980304801,6.09951205974501,5.78932225636041,5.72734889516475,1.13694847062291,2.60743962307241,1.18821560042632,3.98973422090454,3.01511263395268,4.28478553594825,11.3177515757523,6.46304090835383,4.4292937929755,7.01600982092943,7.37384916220821,5.87128938344045,8.10034728056465,7.53956419696361,1.08781136763742,0.983528546038072,1.93155722413313,0.642202359951168,0.468846746368813,0.819674726883377,2.52470927204373,7.88770548540642,8.98009111882268,7.53981892064796,3.58453196928828,1.33679204449436,0.849229592366497,7.2865926301481,3.21481443702443,4.34816555741176,2.24924921495265,1.98716119291576,1.06839362200353,1.95464351224291,2.3095817216155,2.65490276679926,0.242780636154981,0.604647113929502,1.69744571780308,2.06711325016541,0.614870295887855,8.78656196771952,1.09060118843252,1.42598951353889,2.52829406348653,3.16255825724996,1.03135543248187,1.36175842301515,1.08036656418786,3.10460841078611,3.42939256050548,2.83744373827638,4.10248280484762,3.45552943264454,2.43571959291679,5.39744928546534,16.7347335982418,7.71849393192367,3.95727007059552,2.09903754704677,5.48847616846218,5.37175548014114,7.38634048852776,22.7355052571284,1.29797711407357,3.58828849675491,2.06386867963222,0.925972636848558,1.69531611304222,3.00727300986255,2.51655990527175,1.86976272993241,1.81936888020755,1.52019971184866,2.86401185404534,1.10717597753397,2.64315307264903,1.62008011232702,2.29997125615916,1.31017538247707,1.34864346384821,2.0663363931334,2.6175594198403,1.8146096260851,11.8054469486516,0,2.24274819065968,3.14371131868485,2.13896307178452,2.0665571756437,2.19642963138012,1.29092962510329,2.0832701575032,2.41176492179135,0.724752362478018,0.576060012515731,0.316011120628178,0.608175645870493,1.1298205288131,0.649604114888975,0.716106782669926,0.39736270956253,0.240390899039938,0.443068581523732,0.403865799792591,0.457240839929999,0.806609481094724,0.584747284438515,0.288635524920988,0.116876902181569,2.49403421976732,3.10780334723691,0.807424709485281,3.52557694364565,4.63655025677257,1.50145980360946,1.28206136987086,0.857473516316263,4.01257683228291,0,2.30162618253588,1.14579102687879,0.343706364687375,0,0,2.02506750069542,0,0.453142408984205,1.03552062350364,0.415149390336707,0.798049746802062,1.02440163452481,1.70174701947806,1.25767897576789,1.47074806760011,1.77797382241292,1.64828045791115,1.60459604795908,2.77966932940177,2.28131369901216,2.82939512079114,1.87283014939765,2.11283002936069,2.41228969613576,1.90517476513229,2.20180219295225,1.73618298417335,2.06042950401653,2.64958056241915,1.02860775715625,1.4198064492747,2.14592570952589,2.90692833264657,2.54095327121393,1.86152137361688,0.73171189149109,1.31534855718921,2.17286582153379,0.561142271657738,3.2031454893527,1.97008964751127,0.818462086339379,1.85924209423159,2.3148793317737,1.99848462350357,2.8071793013449,1.50409737833809,1.3390183244819,1.98532277207564,3.2461496986859|short_description=p2@Bcar3}}
|EntrezGene=29815
|HGNC=
|MCL_coexpression_id=24
|UniProt=Q9QZK2
|association_with_transcript=0bp_to_ENSMUST00000029766,NM_013867,uc008req.2_5end
|description=CAGE_peak_2_at_Bcar3_5end
|id=chr3:122122690..122122705,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!4.46e-10!43;UBERON:0005409!3.73e-09!59;UBERON:0004119!8.67e-08!130;UBERON:0000925!8.67e-08!130;UBERON:0006595!8.67e-08!130;UBERON:0004923!9.26e-08!24;UBERON:0001007!3.79e-07!128;UBERON:0001555!3.79e-07!128;UBERON:0007026!3.79e-07!128;UBERON:0000344!4.40e-07!15;UBERON:0009569!9.27e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.46e-14,31;UBERON:0005409,2.58e-11,47;UBERON:0004119,1.51e-08,118;UBERON:0000925,1.51e-08,118;UBERON:0006595,1.51e-08,118;UBERON:0001007,7.43e-08,116;UBERON:0001555,7.43e-08,116;UBERON:0007026,7.43e-08,116;UBERON:0004923,1.12e-07,24;UBERON:0000344,3.07e-07,15;UBERON:0004921,3.62e-07,114
|phase1_expression=2.88267924788629,65.2584012285605,59.6049003600292,98.9057970973334,135.241847085514,8.2260843236826,3.27057696833736,0.258246646883153,0,0.234064526321993,0,0,0,0,1.99865857089398,1.01237633694913,0,9.93705820878449,10.5578113876419,14.429248161133,2.63634199468316,0,0,8.63959083084396,9.1763712426868,36.1766137392463,26.2764817657036,18.7459972436723,22.4227634958521,20.6664706403143,10.199603490144,0,0,0,1.73310971850765,2.32728503501889,1.42918549383658,1.25559489221072,1.5626706890476,3.66466620781659,2.94115744015507,2.73218193983378,2.42755176515577,1.51076181570693,1.11514624341466,0,0,2.8343270329458,2.63623419281366,1.55543919259427,1.67983705950435,2.87505128729943,15.939347575485,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,0.528990979272033,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0.7104801149461,2.39680088414724,3.84218305321555,0.414758449233911,0.135005938331691,0.420649922702764,0,0.441737081903227,0.122490799214954,0,0,0,0.510749352340751,0.307213066512487,1.05509030184155,0.457438218012048,2.08365348222704,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,0.186399445825301,0.37863096666592,1.20914496170857,2.02905142091174,2.58127163094416,1.3599426674155,4.31762553310254,4.54843492213368,4.92829575807069,4.35377702408431,1.02258193546835,0.779358013808606,1.41335829804136,1.97180787687353,0,0,0,5.62876706629157,2.78695852022608,3.0331466700887,8.33542321949138,6.99132285847364,3.56261133755579,1.04091196059682,2.13125834818499,2.07553947530453,1.3565037649736,1.99900802130698,3.51866455723091,10.1349936771093,2.74738778147832,0,2.42650274921114,2.65009822152472,2.42437626567611,0,1.17112318804619,1.67557365450764,23.757506134399,0.239630249011841,0,0.254140454146129,1.64769703345305,0.457500602818626,0.376963056338593,1.39059456153821,1.27857728665165,0.62336413367868,1.1356888414743,2.03678727700633,2.98576729464223,2.27450482590307,2.10441855886474,0.910843100738926,0.689706313300419,0.720248519221397,1.9591626318643,1.76894897793452,2.3060469651273,1.40552586839593,3.10444044886819,0.646703978798527,1.32374256117473,1.40760899331159,1.53437012699302,1.66828349535359,0.348252166522167,2.26360350048738,2.9855140022774,0,0,0.284163499395593,1.03562886267751,0.234526059981096,0.540186184383045,0,0.787056926989615,0.154267112887378,0.465067889500816,1.3413670069981,0.467061369468678,0,1.31333971263276,2.02672023864639,1.02339991197733,1.75640092232841,2.28150911892632,0.630869845692382,0.720332286654991,37.667741260153,20.0982430664294,4.69234151177515,3.0190767341857,3.47942145569652,5.64713868945359,5.78182913996663,8.94060442729028,33.2170343081158,13.3406153326449,16.0854533632172,14.523822459004,15.2071987952914,24.268124033664,19.6685625385972,21.1089749649629,0.948339504765408,0.913988100877831,3.38123207019241,1.62921062276251,1.35766741017338,2.10407459670956,2.65593455921881,3.09981310757165,2.82597710114475,4.81248939295022,5.63259991465583,0.667380422864376,0.589676985339609,0.449724224769707,0.405720242777006,1.4470629585145,2.29163266603278,2.87696137450811,2.2698931748505,4.11842119782122,5.75072826109418,3.72140947668503,4.05648975048929,4.54641980304801,6.09951205974501,5.78932225636041,5.72734889516475,1.13694847062291,2.60743962307241,1.18821560042632,3.98973422090454,3.01511263395268,4.28478553594825,11.3177515757523,6.46304090835383,4.4292937929755,7.01600982092943,7.37384916220821,5.87128938344045,8.10034728056465,7.53956419696361,1.08781136763742,0.983528546038072,1.93155722413313,0.642202359951168,0.468846746368813,0.819674726883377,2.52470927204373,7.88770548540642,8.98009111882268,7.53981892064796,3.58453196928828,1.33679204449436,0.849229592366497,7.2865926301481,3.21481443702443,4.34816555741176,2.24924921495265,1.98716119291576,1.06839362200353,1.95464351224291,2.3095817216155,2.65490276679926,0.242780636154981,0.604647113929502,1.69744571780308,2.06711325016541,0.614870295887855,8.78656196771952,1.09060118843252,1.42598951353889,2.52829406348653,3.16255825724996,1.03135543248187,1.36175842301515,1.08036656418786,3.10460841078611,3.42939256050548,2.83744373827638,4.10248280484762,3.45552943264454,2.43571959291679,5.39744928546534,16.7347335982418,7.71849393192367,3.95727007059552,2.09903754704677,5.48847616846218,5.37175548014114,7.38634048852776,22.7355052571284,1.29797711407357,3.58828849675491,2.06386867963222,0.925972636848558,1.69531611304222,3.00727300986255,2.51655990527175,1.86976272993241,1.81936888020755,1.52019971184866,2.86401185404534,1.10717597753397,2.64315307264903,1.62008011232702,2.29997125615916,1.31017538247707,1.34864346384821,2.0663363931334,2.6175594198403,1.8146096260851,11.8054469486516,0,2.24274819065968,3.14371131868485,2.13896307178452,2.0665571756437,2.19642963138012,1.29092962510329,2.0832701575032,2.41176492179135,0.724752362478018,0.576060012515731,0.316011120628178,0.608175645870493,1.1298205288131,0.649604114888975,0.716106782669926,0.39736270956253,0.240390899039938,0.443068581523732,0.403865799792591,0.457240839929999,0.806609481094724,0.584747284438515,0.288635524920988,0.116876902181569,2.49403421976732,3.10780334723691,0.807424709485281,3.52557694364565,4.63655025677257,1.50145980360946,1.28206136987086,0.857473516316263,4.01257683228291,0,2.30162618253588,1.14579102687879,0.343706364687375,0,0,2.02506750069542,0,0.453142408984205,1.03552062350364,0.415149390336707,0.798049746802062,1.02440163452481,1.70174701947806,1.25767897576789,1.47074806760011,1.77797382241292,1.64828045791115,1.60459604795908,2.77966932940177,2.28131369901216,2.82939512079114,1.87283014939765,2.11283002936069,2.41228969613576,1.90517476513229,2.20180219295225,1.73618298417335,2.06042950401653,2.64958056241915,1.02860775715625,1.4198064492747,2.14592570952589,2.90692833264657,2.54095327121393,1.86152137361688,0.73171189149109,1.31534855718921,2.17286582153379,0.561142271657738,3.2031454893527,1.97008964751127,0.818462086339379,1.85924209423159,2.3148793317737,1.99848462350357,2.8071793013449,1.50409737833809,1.3390183244819,1.98532277207564,3.2461496986859
|short_description=p2@Bcar3
}}

Revision as of 01:23, 14 September 2013

Short description:p2@Bcar3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Bcar3_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000029766, NM_013867, uc008req.2_5end
EntrezGene:Bcar3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Bcar3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I565.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I659.60
CD326+ enterocyte, pool1.CNhs13542.11848-124I398.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I4135.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.18
GP2+ M cell, pool1.CNhs13228.11845-124H936.18
GP2+ M cell, pool2.CNhs13231.11846-124I126.28
GP2+ M cell, pool3.CNhs13240.11847-124I218.75
Ileum epithelium, pool1.CNhs13199.10252-104B922.42
Ileum epithelium, pool2.CNhs13232.10253-104C120.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.94
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.34
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A810.13
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H723.76
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I337.67
intestine, adult.CNhs10496.178-9A320.10
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F78.94
intestine, neonate N00.CNhs11126.644-26D133.22
intestine, neonate N01.CNhs11192.1322-23E913.34
intestine, neonate N06.CNhs11102.688-20B816.09
intestine, neonate N07.CNhs11095.720-20F214.52
intestine, neonate N10.CNhs11098.755-23A515.21
intestine, neonate N20.CNhs11187.827-18D124.27
intestine, neonate N25.CNhs11121.1352-25E319.67
intestine, neonate N30.CNhs11131.1384-42G121.11
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D52.66
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H16.10
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C611.32
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E67.02
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G316.73
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H35.49
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C47.39
small intestine, neonate N16.CNhs11114.790-21I122.74
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine5.46e-1431
gastrointestinal system2.58e-1147
endoderm-derived structure1.51e-08118
endoderm1.51e-08118
presumptive endoderm1.51e-08118
digestive system7.43e-08116
digestive tract7.43e-08116
primitive gut7.43e-08116
organ component layer1.12e-0724
mucosa3.07e-0715
subdivision of digestive tract3.62e-07114







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:122122690..122122705,%2B&oldid=2993874"