FFCP PHASE1:Mm9::chr3:107145808..107145813,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1018|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:107145808..107145813,+|id=chr3:107145808..107145813,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.76e-17,3;CL:0002202,2.76e-17,3;CL:0000069,2.76e-17,3;CL:0002632,2.76e-17,3;CL:0002368,2.76e-17,3;CL:0000307,2.76e-17,3;CL:0000377,2.76e-17,3;CL:0000349,6.38e-16,3;CL:0000351,6.38e-16,3;CL:0002076,9.01e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.19e-07!59;UBERON:0003102!6.96e-07!23;UBERON:0000014!8.79e-07!5;UBERON:0001003!8.79e-07!5;UBERON:0002097!8.79e-07!5;UBERON:0002199!8.79e-07!5;UBERON:0007029!8.79e-07!5;UBERON:0007376!8.79e-07!5;UBERON:0002416!8.79e-07!5;UBERON:0007383!8.79e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.76e-17,3;UBERON:0001005,2.76e-17,3;UBERON:0007196,2.76e-17,3;UBERON:0001558,2.76e-17,3;UBERON:0000358,6.38e-16,3;UBERON:0000307,6.38e-16,3;UBERON:0007010,6.38e-16,3;UBERON:0000014,5.39e-10,5;UBERON:0001003,5.39e-10,5;UBERON:0002097,5.39e-10,5;UBERON:0002199,5.39e-10,5;UBERON:0007029,5.39e-10,5;UBERON:0007376,5.39e-10,5;UBERON:0002416,5.39e-10,5;UBERON:0007383,5.39e-10,5;UBERON:0003102,2.97e-08,22;UBERON:0000996,5.73e-07,1;UBERON:0001723,9.48e-07,1;UBERON:0001033,9.48e-07,1;UBERON:0010056,9.48e-07,1|phase1_expression=0,0,0.454999239389536,1.51232105653415,1.00179145989269,0.16787927191189,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.91763712426868,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,4.76280290224671,5.06719730950197,4.54972000513305,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0,0,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,1.23469281844766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.494096864172033,0.502670417600539,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,1.97863503529776,0.645857706783622,0.844380948994182,2.14870219205646,1.64140899745061,0.291480836629851,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0.203319467126849,0.756037385752609,1.46361807210128,2.62035076495413,0.539457385539283,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,2.72076460338254,1.33191572024439,1.43542170575161,2.68615386182526,0,0.187682475451182,0.549454872801795,6.43105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0,0.367687016900028,0,0.206035057238894,0,0,0,0,0,0.192075457214608,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.197008964751127,0.818462086339379,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0.765153328275374,0.220591419119515,0.463735671240843|short_description=p@chr3:107145808..107145813,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1018 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:107145808..107145813,+ | |||
|id=chr3:107145808..107145813,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.76e-17,3;CL:0002202,2.76e-17,3;CL:0000069,2.76e-17,3;CL:0002632,2.76e-17,3;CL:0002368,2.76e-17,3;CL:0000307,2.76e-17,3;CL:0000377,2.76e-17,3;CL:0000349,6.38e-16,3;CL:0000351,6.38e-16,3;CL:0002076,9.01e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.19e-07!59;UBERON:0003102!6.96e-07!23;UBERON:0000014!8.79e-07!5;UBERON:0001003!8.79e-07!5;UBERON:0002097!8.79e-07!5;UBERON:0002199!8.79e-07!5;UBERON:0007029!8.79e-07!5;UBERON:0007376!8.79e-07!5;UBERON:0002416!8.79e-07!5;UBERON:0007383!8.79e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.76e-17,3;UBERON:0001005,2.76e-17,3;UBERON:0007196,2.76e-17,3;UBERON:0001558,2.76e-17,3;UBERON:0000358,6.38e-16,3;UBERON:0000307,6.38e-16,3;UBERON:0007010,6.38e-16,3;UBERON:0000014,5.39e-10,5;UBERON:0001003,5.39e-10,5;UBERON:0002097,5.39e-10,5;UBERON:0002199,5.39e-10,5;UBERON:0007029,5.39e-10,5;UBERON:0007376,5.39e-10,5;UBERON:0002416,5.39e-10,5;UBERON:0007383,5.39e-10,5;UBERON:0003102,2.97e-08,22;UBERON:0000996,5.73e-07,1;UBERON:0001723,9.48e-07,1;UBERON:0001033,9.48e-07,1;UBERON:0010056,9.48e-07,1 | |||
|phase1_expression=0,0,0.454999239389536,1.51232105653415,1.00179145989269,0.16787927191189,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.91763712426868,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,4.76280290224671,5.06719730950197,4.54972000513305,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0,0,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,1.23469281844766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.494096864172033,0.502670417600539,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,1.97863503529776,0.645857706783622,0.844380948994182,2.14870219205646,1.64140899745061,0.291480836629851,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0.203319467126849,0.756037385752609,1.46361807210128,2.62035076495413,0.539457385539283,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,2.72076460338254,1.33191572024439,1.43542170575161,2.68615386182526,0,0.187682475451182,0.549454872801795,6.43105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0,0.367687016900028,0,0.206035057238894,0,0,0,0,0,0.192075457214608,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.197008964751127,0.818462086339379,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0.765153328275374,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr3:107145808..107145813,+ | |||
}} |
Revision as of 01:11, 14 September 2013
Short description: | p@chr3:107145808..107145813, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:107145808..107145813, + |
Coexpression cluster: | MCL_coexpression_mm9:1018 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.76e-17 | 3 |
epithelial cell of tracheobronchial tree | 2.76e-17 | 3 |
branched duct epithelial cell | 2.76e-17 | 3 |
epithelial cell of lower respiratory tract | 2.76e-17 | 3 |
respiratory epithelial cell | 2.76e-17 | 3 |
tracheal epithelial cell | 2.76e-17 | 3 |
tracheoblast | 2.76e-17 | 3 |
extraembryonic cell | 6.38e-16 | 3 |
trophoblast cell | 6.38e-16 | 3 |
endo-epithelial cell | 9.01e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.76e-17 | 3 |
respiratory airway | 2.76e-17 | 3 |
tracheobronchial tree | 2.76e-17 | 3 |
lower respiratory tract | 2.76e-17 | 3 |
blastocyst | 6.38e-16 | 3 |
blastula | 6.38e-16 | 3 |
cleaving embryo | 6.38e-16 | 3 |
zone of skin | 5.39e-10 | 5 |
skin epidermis | 5.39e-10 | 5 |
skin of body | 5.39e-10 | 5 |
integument | 5.39e-10 | 5 |
surface | 5.39e-10 | 5 |
outer epithelium | 5.39e-10 | 5 |
integumental system | 5.39e-10 | 5 |
enveloping layer of ectoderm | 5.39e-10 | 5 |
surface structure | 2.97e-08 | 22 |
vagina | 5.73e-07 | 1 |
tongue | 9.48e-07 | 1 |
gustatory system | 9.48e-07 | 1 |
future tongue | 9.48e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.