FFCP PHASE1:Hg19::chr7:148036562..148036609,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26047|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13830|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000463592_5end|coexpression_cluster_id=C4664|description=CAGE_peak_3_at_CNTNAP2_5end|id=chr7:148036562..148036609,+|ontology_enrichment_celltype=CL:0000047!1.37e-09!8;CL:0002319!5.55e-08!25;CL:0000221!1.23e-07!71;CL:0000540!1.80e-07!6;CL:0000031!1.80e-07!6;CL:0000404!1.80e-07!6;CL:0000236!1.88e-07!14;CL:0000039!2.49e-07!7;CL:0000586!2.49e-07!7;CL:0002322!6.06e-07!5|ontology_enrichment_celltype_v019=CL:0000236;1.03e-10;13!CL:0000540;1.41e-10;6!CL:0000404;1.41e-10;6!CL:0000039;2.86e-10;7!CL:0000586;2.86e-10;7!CL:0002322;8.69e-10;5!CL:0002319;6.79e-09;25|ontology_enrichment_celltype_v019_2=CL:0000047,8.21e-14,8;CL:0000540,1.39e-10,6;CL:0000031,1.39e-10,6;CL:0000404,1.39e-10,6;CL:0000039,2.27e-10,7;CL:0000586,2.27e-10,7;CL:0002322,8.75e-10,5;CL:0000236,9.23e-10,14;CL:0002319,7.03e-09,25;CL:0000221,1.16e-08,72;CL:0000133,2.50e-08,59|ontology_enrichment_development_v019=CL:0000031;1.41e-10;6|ontology_enrichment_disease=DOID:3095!4.48e-09!22;DOID:2994!4.48e-09!22|ontology_enrichment_disease_v019=DOID:3095;5.91e-13;22!DOID:2994;5.91e-13;22|ontology_enrichment_disease_v019_2=DOID:3095,4.85e-13,22;DOID:2994,4.85e-13,22|ontology_enrichment_uberon=UBERON:0001017!1.85e-32!82;UBERON:0005743!2.44e-31!86;UBERON:0000073!4.31e-30!94;UBERON:0001016!4.31e-30!94;UBERON:0000955!8.49e-25!69;UBERON:0006238!8.49e-25!69;UBERON:0001049!4.71e-23!57;UBERON:0005068!4.71e-23!57;UBERON:0006241!4.71e-23!57;UBERON:0007135!4.71e-23!57;UBERON:0002616!2.66e-22!59;UBERON:0002346!2.89e-20!90;UBERON:0000153!5.89e-20!129;UBERON:0007811!5.89e-20!129;UBERON:0002780!8.68e-20!41;UBERON:0001890!8.68e-20!41;UBERON:0006240!8.68e-20!41;UBERON:0000033!2.63e-19!123;UBERON:0003075!3.39e-19!86;UBERON:0007284!3.39e-19!86;UBERON:0003080!5.03e-19!42;UBERON:0000924!5.48e-19!173;UBERON:0006601!5.48e-19!173;UBERON:0002020!2.06e-18!34;UBERON:0003528!2.06e-18!34;UBERON:0001869!2.19e-18!32;UBERON:0001893!5.46e-18!34;UBERON:0004121!5.65e-18!169;UBERON:0003056!7.49e-18!61;UBERON:0002791!2.00e-17!33;UBERON:0007023!4.20e-17!115;UBERON:0000956!3.19e-14!25;UBERON:0000203!3.19e-14!25;UBERON:0002619!4.00e-12!22;UBERON:0001950!7.17e-11!20;UBERON:0004111!9.11e-09!241;UBERON:0000025!2.19e-08!194;UBERON:0000477!1.37e-07!286;UBERON:0000922!4.37e-07!612|ontology_enrichment_uberon_v019=UBERON:0001869;3.53e-12;32!UBERON:0003528;2.52e-11;34!UBERON:0002020;2.52e-11;34!UBERON:0001017;3.53e-11;75!UBERON:0000955;6.89e-11;68!UBERON:0002791;7.64e-11;32!UBERON:0001893;1.13e-10;34!UBERON:0000073;1.97e-10;53!UBERON:0002616;1.97e-10;53!UBERON:0002780;4.52e-10;41!UBERON:0001890;4.52e-10;41!UBERON:0001016;9.82e-10;83!UBERON:0000956;1.13e-08;25!UBERON:0000203;1.13e-08;25!UBERON:0002298;3.69e-08;6!UBERON:0002619;3.03e-07;22!UBERON:0001950;7.99e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.03e-28,89;UBERON:0001017,1.27e-28,81;UBERON:0000955,1.35e-19,68;UBERON:0006238,1.35e-19,68;UBERON:0011216,1.15e-18,223;UBERON:0000073,1.60e-17,53;UBERON:0002616,1.60e-17,53;UBERON:0001049,2.57e-17,56;UBERON:0005068,2.57e-17,56;UBERON:0006241,2.57e-17,56;UBERON:0007135,2.57e-17,56;UBERON:0004121,6.04e-17,171;UBERON:0000924,6.04e-17,171;UBERON:0006601,6.04e-17,171;UBERON:0002346,4.45e-16,86;UBERON:0003075,2.71e-15,82;UBERON:0007284,2.71e-15,82;UBERON:0002780,9.94e-14,41;UBERON:0001890,9.94e-14,41;UBERON:0003080,9.94e-14,41;UBERON:0006240,9.94e-14,41;UBERON:0003056,1.19e-13,61;UBERON:0003528,2.85e-13,34;UBERON:0002020,2.85e-13,34;UBERON:0010371,5.22e-13,104;UBERON:0001869,9.58e-13,32;UBERON:0001893,1.07e-11,34;UBERON:0002791,1.75e-11,32;UBERON:0002298,1.53e-08,6;UBERON:0000956,1.72e-08,25;UBERON:0000203,1.72e-08,25;UBERON:0002619,4.57e-07,22;UBERON:0010314,5.27e-07,132|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,2.58554221961255,0,0.313454721478088,6.86966369114536,5.61185142798825,0.502170558379211,0,0,0,0,0,0,0,2.71085326900425,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,6.00752472388345,8.00558328477199,0.426730222566507,1.60158394814405,9.77079147922622,5.94940385506376,4.77026877267682,19.3532409497212,18.79159005987,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,17.4889411753526,5.98669373148923,5.44575671297381,0.392937226493138,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,2.01414658554573,1.52054421143703,0.976248230192678,0,0,0,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,12.8653813498192,9.79499071615998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,1.36373060295417,0.286804595389004,30.0055317078805,61.4938125011692,43.3403406903304,62.7149382842991,45.4177531576131,109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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26047 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13830 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000463592_5end | |||
|coexpression_cluster_id=C4664 | |||
|description=CAGE_peak_3_at_CNTNAP2_5end | |||
|id=chr7:148036562..148036609,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.37e-09!8;CL:0002319!5.55e-08!25;CL:0000221!1.23e-07!71;CL:0000540!1.80e-07!6;CL:0000031!1.80e-07!6;CL:0000404!1.80e-07!6;CL:0000236!1.88e-07!14;CL:0000039!2.49e-07!7;CL:0000586!2.49e-07!7;CL:0002322!6.06e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.03e-10;13!CL:0000540;1.41e-10;6!CL:0000404;1.41e-10;6!CL:0000039;2.86e-10;7!CL:0000586;2.86e-10;7!CL:0002322;8.69e-10;5!CL:0002319;6.79e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.21e-14,8;CL:0000540,1.39e-10,6;CL:0000031,1.39e-10,6;CL:0000404,1.39e-10,6;CL:0000039,2.27e-10,7;CL:0000586,2.27e-10,7;CL:0002322,8.75e-10,5;CL:0000236,9.23e-10,14;CL:0002319,7.03e-09,25;CL:0000221,1.16e-08,72;CL:0000133,2.50e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.41e-10;6 | |||
|ontology_enrichment_disease=DOID:3095!4.48e-09!22;DOID:2994!4.48e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.91e-13;22!DOID:2994;5.91e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.85e-13,22;DOID:2994,4.85e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.85e-32!82;UBERON:0005743!2.44e-31!86;UBERON:0000073!4.31e-30!94;UBERON:0001016!4.31e-30!94;UBERON:0000955!8.49e-25!69;UBERON:0006238!8.49e-25!69;UBERON:0001049!4.71e-23!57;UBERON:0005068!4.71e-23!57;UBERON:0006241!4.71e-23!57;UBERON:0007135!4.71e-23!57;UBERON:0002616!2.66e-22!59;UBERON:0002346!2.89e-20!90;UBERON:0000153!5.89e-20!129;UBERON:0007811!5.89e-20!129;UBERON:0002780!8.68e-20!41;UBERON:0001890!8.68e-20!41;UBERON:0006240!8.68e-20!41;UBERON:0000033!2.63e-19!123;UBERON:0003075!3.39e-19!86;UBERON:0007284!3.39e-19!86;UBERON:0003080!5.03e-19!42;UBERON:0000924!5.48e-19!173;UBERON:0006601!5.48e-19!173;UBERON:0002020!2.06e-18!34;UBERON:0003528!2.06e-18!34;UBERON:0001869!2.19e-18!32;UBERON:0001893!5.46e-18!34;UBERON:0004121!5.65e-18!169;UBERON:0003056!7.49e-18!61;UBERON:0002791!2.00e-17!33;UBERON:0007023!4.20e-17!115;UBERON:0000956!3.19e-14!25;UBERON:0000203!3.19e-14!25;UBERON:0002619!4.00e-12!22;UBERON:0001950!7.17e-11!20;UBERON:0004111!9.11e-09!241;UBERON:0000025!2.19e-08!194;UBERON:0000477!1.37e-07!286;UBERON:0000922!4.37e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.53e-12;32!UBERON:0003528;2.52e-11;34!UBERON:0002020;2.52e-11;34!UBERON:0001017;3.53e-11;75!UBERON:0000955;6.89e-11;68!UBERON:0002791;7.64e-11;32!UBERON:0001893;1.13e-10;34!UBERON:0000073;1.97e-10;53!UBERON:0002616;1.97e-10;53!UBERON:0002780;4.52e-10;41!UBERON:0001890;4.52e-10;41!UBERON:0001016;9.82e-10;83!UBERON:0000956;1.13e-08;25!UBERON:0000203;1.13e-08;25!UBERON:0002298;3.69e-08;6!UBERON:0002619;3.03e-07;22!UBERON:0001950;7.99e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.03e-28,89;UBERON:0001017,1.27e-28,81;UBERON:0000955,1.35e-19,68;UBERON:0006238,1.35e-19,68;UBERON:0011216,1.15e-18,223;UBERON:0000073,1.60e-17,53;UBERON:0002616,1.60e-17,53;UBERON:0001049,2.57e-17,56;UBERON:0005068,2.57e-17,56;UBERON:0006241,2.57e-17,56;UBERON:0007135,2.57e-17,56;UBERON:0004121,6.04e-17,171;UBERON:0000924,6.04e-17,171;UBERON:0006601,6.04e-17,171;UBERON:0002346,4.45e-16,86;UBERON:0003075,2.71e-15,82;UBERON:0007284,2.71e-15,82;UBERON:0002780,9.94e-14,41;UBERON:0001890,9.94e-14,41;UBERON:0003080,9.94e-14,41;UBERON:0006240,9.94e-14,41;UBERON:0003056,1.19e-13,61;UBERON:0003528,2.85e-13,34;UBERON:0002020,2.85e-13,34;UBERON:0010371,5.22e-13,104;UBERON:0001869,9.58e-13,32;UBERON:0001893,1.07e-11,34;UBERON:0002791,1.75e-11,32;UBERON:0002298,1.53e-08,6;UBERON:0000956,1.72e-08,25;UBERON:0000203,1.72e-08,25;UBERON:0002619,4.57e-07,22;UBERON:0010314,5.27e-07,132 | |||
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| |||
|short_description=p3@CNTNAP2 | |||
}} |
Revision as of 23:49, 13 September 2013
Short description: | p3@CNTNAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CNTNAP2_5end |
Coexpression cluster: | C4664_teratocarcinoma_iPS_HES3GFP_Neural_H9_Lens_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000463592_5end |
EntrezGene: | CNTNAP2 |
HGNC: | 13830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.21e-14 | 8 |
neuron | 1.39e-10 | 6 |
neuroblast | 1.39e-10 | 6 |
electrically signaling cell | 1.39e-10 | 6 |
germ line cell | 2.27e-10 | 7 |
germ cell | 2.27e-10 | 7 |
embryonic stem cell | 8.75e-10 | 5 |
B cell | 9.23e-10 | 14 |
neural cell | 7.03e-09 | 25 |
ectodermal cell | 1.16e-08 | 72 |
neurectodermal cell | 2.50e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.03e-28 | 89 |
central nervous system | 1.27e-28 | 81 |
brain | 1.35e-19 | 68 |
future brain | 1.35e-19 | 68 |
organ system subdivision | 1.15e-18 | 223 |
regional part of nervous system | 1.60e-17 | 53 |
regional part of brain | 1.60e-17 | 53 |
neural tube | 2.57e-17 | 56 |
neural rod | 2.57e-17 | 56 |
future spinal cord | 2.57e-17 | 56 |
neural keel | 2.57e-17 | 56 |
ectoderm-derived structure | 6.04e-17 | 171 |
ectoderm | 6.04e-17 | 171 |
presumptive ectoderm | 6.04e-17 | 171 |
neurectoderm | 4.45e-16 | 86 |
neural plate | 2.71e-15 | 82 |
presumptive neural plate | 2.71e-15 | 82 |
regional part of forebrain | 9.94e-14 | 41 |
forebrain | 9.94e-14 | 41 |
anterior neural tube | 9.94e-14 | 41 |
future forebrain | 9.94e-14 | 41 |
pre-chordal neural plate | 1.19e-13 | 61 |
brain grey matter | 2.85e-13 | 34 |
gray matter | 2.85e-13 | 34 |
ecto-epithelium | 5.22e-13 | 104 |
cerebral hemisphere | 9.58e-13 | 32 |
telencephalon | 1.07e-11 | 34 |
regional part of telencephalon | 1.75e-11 | 32 |
brainstem | 1.53e-08 | 6 |
cerebral cortex | 1.72e-08 | 25 |
pallium | 1.72e-08 | 25 |
regional part of cerebral cortex | 4.57e-07 | 22 |
structure with developmental contribution from neural crest | 5.27e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.85e-13 | 22 |
germ cell cancer | 4.85e-13 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.