FFCP PHASE1:Mm9::chr2:28413496..28413537,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=23|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:28413496..28413537,+|id=chr2:28413496..28413537,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!8.43e-35!59;UBERON:0000160!9.80e-26!43;UBERON:0001045!2.92e-25!13;UBERON:0001264!1.45e-23!12;UBERON:0003922!1.45e-23!12;UBERON:0002114!1.45e-23!12;UBERON:0003923!1.45e-23!12;UBERON:0003924!1.45e-23!12;UBERON:0003921!1.45e-23!12;UBERON:0002075!6.68e-21!19;UBERON:0002108!6.72e-20!16;UBERON:0004921!1.34e-17!126;UBERON:0004185!1.34e-17!126;UBERON:0001007!3.62e-17!128;UBERON:0001555!3.62e-17!128;UBERON:0007026!3.62e-17!128;UBERON:0004119!9.48e-17!130;UBERON:0000925!9.48e-17!130;UBERON:0006595!9.48e-17!130;UBERON:0001041!3.21e-09!92;UBERON:0000945!7.24e-09!16;UBERON:0010039!7.24e-09!16;UBERON:0002323!8.16e-09!37;UBERON:0004458!8.16e-09!37;UBERON:0003886!1.74e-08!38;UBERON:0000077!2.15e-08!97;UBERON:0002553!3.58e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.22e-30,12;UBERON:0002075,3.03e-18,19;UBERON:0005409,4.73e-12,47;UBERON:0000160,5.10e-11,31;UBERON:0002323,2.84e-08,37;UBERON:0004458,2.84e-08,37;UBERON:0003886,5.36e-08,38;UBERON:0002553,9.79e-08,39;UBERON:0001155,6.49e-07,2;UBERON:0000059,6.49e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,24.0129631896076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,10.2429822724977,0.264450566663544,0,0,0,0.201683524623343,0,1.90225626112559,2.84717436926707,1.15289268306808,7.54005626400809,4.77495532898762,4.67913809085888,6.29173586057955,0,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,2.87536413054709,0.372140947668503,1.24815069245824,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90117127622843,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,268.145179446725,0.242780636154981,1.51161778482376,12.6365403436452,25.6912646806272,41.1963098244863,26.3596859031586,33.4451031119305,52.405114622554,95.7591376545522,255.113032751497,219.678707118638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82961673259701,0,0,0.206386867963223,0.555583582109135,0,0.410082683163076,0,0,0,0,2.86401185404534,0,0.406638934253697,0.216010681643603,1.04544148007234,2.40198820120795,1.21377911746339,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr2:28413496..28413537,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:28413496..28413537,+ | |||
|id=chr2:28413496..28413537,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.43e-35!59;UBERON:0000160!9.80e-26!43;UBERON:0001045!2.92e-25!13;UBERON:0001264!1.45e-23!12;UBERON:0003922!1.45e-23!12;UBERON:0002114!1.45e-23!12;UBERON:0003923!1.45e-23!12;UBERON:0003924!1.45e-23!12;UBERON:0003921!1.45e-23!12;UBERON:0002075!6.68e-21!19;UBERON:0002108!6.72e-20!16;UBERON:0004921!1.34e-17!126;UBERON:0004185!1.34e-17!126;UBERON:0001007!3.62e-17!128;UBERON:0001555!3.62e-17!128;UBERON:0007026!3.62e-17!128;UBERON:0004119!9.48e-17!130;UBERON:0000925!9.48e-17!130;UBERON:0006595!9.48e-17!130;UBERON:0001041!3.21e-09!92;UBERON:0000945!7.24e-09!16;UBERON:0010039!7.24e-09!16;UBERON:0002323!8.16e-09!37;UBERON:0004458!8.16e-09!37;UBERON:0003886!1.74e-08!38;UBERON:0000077!2.15e-08!97;UBERON:0002553!3.58e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.22e-30,12;UBERON:0002075,3.03e-18,19;UBERON:0005409,4.73e-12,47;UBERON:0000160,5.10e-11,31;UBERON:0002323,2.84e-08,37;UBERON:0004458,2.84e-08,37;UBERON:0003886,5.36e-08,38;UBERON:0002553,9.79e-08,39;UBERON:0001155,6.49e-07,2;UBERON:0000059,6.49e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,24.0129631896076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,10.2429822724977,0.264450566663544,0,0,0,0.201683524623343,0,1.90225626112559,2.84717436926707,1.15289268306808,7.54005626400809,4.77495532898762,4.67913809085888,6.29173586057955,0,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,2.87536413054709,0.372140947668503,1.24815069245824,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90117127622843,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,268.145179446725,0.242780636154981,1.51161778482376,12.6365403436452,25.6912646806272,41.1963098244863,26.3596859031586,33.4451031119305,52.405114622554,95.7591376545522,255.113032751497,219.678707118638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82961673259701,0,0,0.206386867963223,0.555583582109135,0,0.410082683163076,0,0,0,0,2.86401185404534,0,0.406638934253697,0.216010681643603,1.04544148007234,2.40198820120795,1.21377911746339,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr2:28413496..28413537,+ | |||
}} |
Revision as of 23:36, 13 September 2013
Short description: | p@chr2:28413496..28413537, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:28413496..28413537, + |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 3.22e-30 | 12 |
viscus | 3.03e-18 | 19 |
gastrointestinal system | 4.73e-12 | 47 |
intestine | 5.10e-11 | 31 |
body cavity | 2.84e-08 | 37 |
body cavity or lining | 2.84e-08 | 37 |
body cavity precursor | 5.36e-08 | 38 |
anatomical cavity | 9.79e-08 | 39 |
colon | 6.49e-07 | 2 |
large intestine | 6.49e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.