FFCP PHASE1:Hg19::chr7:136936091..136936115,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C808|description=CAGE_peak_at_chr7:136936091..136936115,-|id=chr7:136936091..136936115,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;2.57e-08;2|ontology_enrichment_celltype_v019_2=CL:0000047,1.93e-11,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.39e-41!82;UBERON:0005743!1.04e-39!86;UBERON:0001049!2.07e-38!57;UBERON:0005068!2.07e-38!57;UBERON:0006241!2.07e-38!57;UBERON:0007135!2.07e-38!57;UBERON:0000073!7.59e-38!94;UBERON:0001016!7.59e-38!94;UBERON:0002616!1.24e-35!59;UBERON:0000955!1.72e-35!69;UBERON:0006238!1.72e-35!69;UBERON:0003080!4.56e-32!42;UBERON:0002780!3.43e-31!41;UBERON:0001890!3.43e-31!41;UBERON:0006240!3.43e-31!41;UBERON:0007023!1.90e-29!115;UBERON:0003075!3.74e-29!86;UBERON:0007284!3.74e-29!86;UBERON:0000033!4.60e-29!123;UBERON:0002346!5.00e-29!90;UBERON:0000924!1.02e-28!173;UBERON:0006601!1.02e-28!173;UBERON:0000153!1.38e-28!129;UBERON:0007811!1.38e-28!129;UBERON:0004121!1.83e-28!169;UBERON:0002020!4.51e-27!34;UBERON:0003528!4.51e-27!34;UBERON:0001893!1.41e-26!34;UBERON:0002791!6.39e-26!33;UBERON:0001869!3.07e-25!32;UBERON:0003056!2.08e-23!61;UBERON:0000956!2.90e-19!25;UBERON:0000203!2.90e-19!25;UBERON:0002619!3.24e-16!22;UBERON:0001950!3.69e-16!20;UBERON:0002420!5.90e-10!9;UBERON:0007245!5.90e-10!9;UBERON:0010009!5.90e-10!9;UBERON:0010011!5.90e-10!9;UBERON:0000454!5.90e-10!9;UBERON:0001871!9.96e-10!7;UBERON:0002308!2.70e-09!9;UBERON:0000125!2.70e-09!9;UBERON:0000064!2.21e-08!219;UBERON:0002298!3.40e-08!8;UBERON:0000062!3.66e-08!511;UBERON:0003076!9.48e-08!15;UBERON:0003057!9.48e-08!15;UBERON:0009663!1.01e-07!7;UBERON:0004732!1.68e-07!13;UBERON:0000475!3.45e-07!365|ontology_enrichment_uberon_v019=UBERON:0000956;2.84e-31;25!UBERON:0000203;2.84e-31;25!UBERON:0002791;1.00e-27;32!UBERON:0001869;1.29e-27;32!UBERON:0002619;3.04e-27;22!UBERON:0001950;8.30e-26;20!UBERON:0001893;1.46e-24;34!UBERON:0003528;1.66e-24;34!UBERON:0002020;1.66e-24;34!UBERON:0002780;1.55e-23;41!UBERON:0001890;1.55e-23;41!UBERON:0000073;1.83e-20;53!UBERON:0002616;1.83e-20;53!UBERON:0001871;4.40e-18;6!UBERON:0000955;3.74e-12;68!UBERON:0001017;4.32e-12;75!UBERON:0001016;1.77e-11;83!UBERON:0003296;1.68e-08;4!UBERON:0010133;1.68e-08;4!UBERON:0002771;2.15e-08;2!UBERON:0000007;3.37e-08;2!UBERON:0001876;4.99e-08;2!UBERON:0000922;2.31e-07;49!UBERON:0002021;3.20e-07;5!UBERON:0000349;5.46e-07;5!UBERON:0001872;8.83e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.51e-35,56;UBERON:0005068,1.51e-35,56;UBERON:0006241,1.51e-35,56;UBERON:0007135,1.51e-35,56;UBERON:0001017,1.25e-33,81;UBERON:0001016,7.24e-32,89;UBERON:0002780,8.72e-32,41;UBERON:0001890,8.72e-32,41;UBERON:0003080,8.72e-32,41;UBERON:0006240,8.72e-32,41;UBERON:0000073,1.28e-31,53;UBERON:0002616,1.28e-31,53;UBERON:0000956,3.57e-31,25;UBERON:0000203,3.57e-31,25;UBERON:0002791,1.97e-30,32;UBERON:0001869,1.97e-30,32;UBERON:0003528,1.99e-28,34;UBERON:0002020,1.99e-28,34;UBERON:0001893,1.99e-28,34;UBERON:0002619,4.35e-27,22;UBERON:0003075,1.43e-26,82;UBERON:0007284,1.43e-26,82;UBERON:0001950,1.26e-25,20;UBERON:0002346,5.13e-25,86;UBERON:0000955,5.74e-23,68;UBERON:0006238,5.74e-23,68;UBERON:0003056,4.87e-22,61;UBERON:0010371,1.69e-19,104;UBERON:0001871,4.06e-18,6;UBERON:0004121,1.83e-16,171;UBERON:0000924,1.83e-16,171;UBERON:0006601,1.83e-16,171;UBERON:0011216,9.30e-16,223;UBERON:0010314,3.53e-15,132;UBERON:0007023,1.95e-09,114;UBERON:0003296,2.58e-08,4;UBERON:0010133,2.58e-08,4;UBERON:0002771,2.88e-08,2;UBERON:0001876,2.99e-08,2;UBERON:0005253,3.33e-08,2;UBERON:0000007,4.43e-08,2;UBERON:0002021,3.69e-07,5;UBERON:0000349,3.84e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,2.57612388417951,0.958120975510189,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0.973269740605272,0.472674085820339,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,1.18800285728205,0.494533858557114,0,0,0,0.250237039743928,0.277064115484183,0.438977620880838,0.612975591598039,0.45071417671979,0,0,0,0,0.300091096084402,0.206105058476878,0.515281080091258,0.37223371266318,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,1.0366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C808 | |||
|description=CAGE_peak_at_chr7:136936091..136936115,- | |||
|id=chr7:136936091..136936115,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.93e-11,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.39e-41!82;UBERON:0005743!1.04e-39!86;UBERON:0001049!2.07e-38!57;UBERON:0005068!2.07e-38!57;UBERON:0006241!2.07e-38!57;UBERON:0007135!2.07e-38!57;UBERON:0000073!7.59e-38!94;UBERON:0001016!7.59e-38!94;UBERON:0002616!1.24e-35!59;UBERON:0000955!1.72e-35!69;UBERON:0006238!1.72e-35!69;UBERON:0003080!4.56e-32!42;UBERON:0002780!3.43e-31!41;UBERON:0001890!3.43e-31!41;UBERON:0006240!3.43e-31!41;UBERON:0007023!1.90e-29!115;UBERON:0003075!3.74e-29!86;UBERON:0007284!3.74e-29!86;UBERON:0000033!4.60e-29!123;UBERON:0002346!5.00e-29!90;UBERON:0000924!1.02e-28!173;UBERON:0006601!1.02e-28!173;UBERON:0000153!1.38e-28!129;UBERON:0007811!1.38e-28!129;UBERON:0004121!1.83e-28!169;UBERON:0002020!4.51e-27!34;UBERON:0003528!4.51e-27!34;UBERON:0001893!1.41e-26!34;UBERON:0002791!6.39e-26!33;UBERON:0001869!3.07e-25!32;UBERON:0003056!2.08e-23!61;UBERON:0000956!2.90e-19!25;UBERON:0000203!2.90e-19!25;UBERON:0002619!3.24e-16!22;UBERON:0001950!3.69e-16!20;UBERON:0002420!5.90e-10!9;UBERON:0007245!5.90e-10!9;UBERON:0010009!5.90e-10!9;UBERON:0010011!5.90e-10!9;UBERON:0000454!5.90e-10!9;UBERON:0001871!9.96e-10!7;UBERON:0002308!2.70e-09!9;UBERON:0000125!2.70e-09!9;UBERON:0000064!2.21e-08!219;UBERON:0002298!3.40e-08!8;UBERON:0000062!3.66e-08!511;UBERON:0003076!9.48e-08!15;UBERON:0003057!9.48e-08!15;UBERON:0009663!1.01e-07!7;UBERON:0004732!1.68e-07!13;UBERON:0000475!3.45e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.84e-31;25!UBERON:0000203;2.84e-31;25!UBERON:0002791;1.00e-27;32!UBERON:0001869;1.29e-27;32!UBERON:0002619;3.04e-27;22!UBERON:0001950;8.30e-26;20!UBERON:0001893;1.46e-24;34!UBERON:0003528;1.66e-24;34!UBERON:0002020;1.66e-24;34!UBERON:0002780;1.55e-23;41!UBERON:0001890;1.55e-23;41!UBERON:0000073;1.83e-20;53!UBERON:0002616;1.83e-20;53!UBERON:0001871;4.40e-18;6!UBERON:0000955;3.74e-12;68!UBERON:0001017;4.32e-12;75!UBERON:0001016;1.77e-11;83!UBERON:0003296;1.68e-08;4!UBERON:0010133;1.68e-08;4!UBERON:0002771;2.15e-08;2!UBERON:0000007;3.37e-08;2!UBERON:0001876;4.99e-08;2!UBERON:0000922;2.31e-07;49!UBERON:0002021;3.20e-07;5!UBERON:0000349;5.46e-07;5!UBERON:0001872;8.83e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.51e-35,56;UBERON:0005068,1.51e-35,56;UBERON:0006241,1.51e-35,56;UBERON:0007135,1.51e-35,56;UBERON:0001017,1.25e-33,81;UBERON:0001016,7.24e-32,89;UBERON:0002780,8.72e-32,41;UBERON:0001890,8.72e-32,41;UBERON:0003080,8.72e-32,41;UBERON:0006240,8.72e-32,41;UBERON:0000073,1.28e-31,53;UBERON:0002616,1.28e-31,53;UBERON:0000956,3.57e-31,25;UBERON:0000203,3.57e-31,25;UBERON:0002791,1.97e-30,32;UBERON:0001869,1.97e-30,32;UBERON:0003528,1.99e-28,34;UBERON:0002020,1.99e-28,34;UBERON:0001893,1.99e-28,34;UBERON:0002619,4.35e-27,22;UBERON:0003075,1.43e-26,82;UBERON:0007284,1.43e-26,82;UBERON:0001950,1.26e-25,20;UBERON:0002346,5.13e-25,86;UBERON:0000955,5.74e-23,68;UBERON:0006238,5.74e-23,68;UBERON:0003056,4.87e-22,61;UBERON:0010371,1.69e-19,104;UBERON:0001871,4.06e-18,6;UBERON:0004121,1.83e-16,171;UBERON:0000924,1.83e-16,171;UBERON:0006601,1.83e-16,171;UBERON:0011216,9.30e-16,223;UBERON:0010314,3.53e-15,132;UBERON:0007023,1.95e-09,114;UBERON:0003296,2.58e-08,4;UBERON:0010133,2.58e-08,4;UBERON:0002771,2.88e-08,2;UBERON:0001876,2.99e-08,2;UBERON:0005253,3.33e-08,2;UBERON:0000007,4.43e-08,2;UBERON:0002021,3.69e-07,5;UBERON:0000349,3.84e-07,5 | |||
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|short_description=p@chr7:136936091..136936115,- | |||
}} |
Revision as of 23:25, 13 September 2013
Short description: | p@chr7:136936091..136936115, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:136936091..136936115, - |
Coexpression cluster: | C808_Neural_spinal_cerebral_hippocampus_cerebellum_duodenum_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.93e-11 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.