FFCP PHASE1:Mm9::chr2:135883447..135883459,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76161|HGNC=|MCL_coexpression_id=2330|UniProt=Q9D387,A2AT94|association_with_transcript=-203bp_to_ENSMUST00000057503,NM_029530,uc008mog.1_5end|description=CAGE_peak_12_at_6330527O06Rik_5end|id=chr2:135883447..135883459,+|ontology_enrichment_celltype=CL:0000117!3.59e-10!23;CL:0000337!3.59e-10!23;CL:0002612!2.52e-08!3;CL:0000120!2.41e-07!3|ontology_enrichment_celltype_v019_2=CL:0002612,2.56e-25,3;CL:0000117,7.55e-22,23;CL:0000337,7.55e-22,23;CL:0002611,3.95e-17,2;CL:0000540,4.23e-15,33;CL:0000047,4.23e-15,33;CL:0000031,4.23e-15,33;CL:0000404,4.23e-15,33;CL:0000393,1.05e-12,39;CL:0000211,1.05e-12,39;CL:0002319,1.79e-11,43;CL:0000221,3.35e-11,44;CL:0000133,3.35e-11,44;CL:0002321,8.05e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!7.95e-15!6;UBERON:0005174!7.95e-15!6;UBERON:0001137!7.95e-15!6;UBERON:0001948!1.06e-12!5;UBERON:0002315!1.06e-12!5;UBERON:0001017!1.56e-12!73;UBERON:0005743!1.56e-12!73;UBERON:0003076!3.26e-12!12;UBERON:0003057!3.26e-12!12;UBERON:0002020!4.04e-12!34;UBERON:0000073!4.89e-12!75;UBERON:0001016!4.89e-12!75;UBERON:0001049!9.49e-12!52;UBERON:0005068!9.49e-12!52;UBERON:0006241!9.49e-12!52;UBERON:0007135!9.49e-12!52;UBERON:0002021!2.51e-10!10;UBERON:0000411!2.51e-10!10;UBERON:0001950!2.51e-10!10;UBERON:0002346!2.17e-09!71;UBERON:0003075!2.17e-09!71;UBERON:0007284!2.17e-09!71;UBERON:0004121!4.59e-09!102;UBERON:0000924!4.59e-09!102;UBERON:0006601!4.59e-09!102;UBERON:0002257!2.52e-08!3;UBERON:0002616!6.93e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.57e-48,6;UBERON:0005174,2.57e-48,6;UBERON:0001137,2.57e-48,6;UBERON:0003076,1.99e-42,12;UBERON:0003057,1.99e-42,12;UBERON:0001948,8.78e-41,5;UBERON:0002315,8.78e-41,5;UBERON:0002257,2.56e-25,3;UBERON:0002256,3.95e-17,2;UBERON:0001896,6.88e-17,2;UBERON:0002298,6.88e-17,2;UBERON:0005290,6.88e-17,2;UBERON:0010096,6.88e-17,2;UBERON:0000489,8.81e-14,21;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0001049,6.26e-12,52;UBERON:0005068,6.26e-12,52;UBERON:0006241,6.26e-12,52;UBERON:0007135,6.26e-12,52;UBERON:0000073,2.00e-11,54;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0002020,2.07e-08,34;UBERON:0010371,2.67e-08,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,0,0,0,2.28520787523043,3.53389665522582,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,1.3959149950069,0,0,4.41942878210502,3.55929201997757,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0.347648640384553,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0.38581844092741,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p12@6330527O06Rik}} | ||
|EntrezGene=76161 | |||
|HGNC= | |||
|MCL_coexpression_id=2330 | |||
|UniProt=Q9D387,A2AT94 | |||
|association_with_transcript=-203bp_to_ENSMUST00000057503,NM_029530,uc008mog.1_5end | |||
|description=CAGE_peak_12_at_6330527O06Rik_5end | |||
|id=chr2:135883447..135883459,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.59e-10!23;CL:0000337!3.59e-10!23;CL:0002612!2.52e-08!3;CL:0000120!2.41e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.56e-25,3;CL:0000117,7.55e-22,23;CL:0000337,7.55e-22,23;CL:0002611,3.95e-17,2;CL:0000540,4.23e-15,33;CL:0000047,4.23e-15,33;CL:0000031,4.23e-15,33;CL:0000404,4.23e-15,33;CL:0000393,1.05e-12,39;CL:0000211,1.05e-12,39;CL:0002319,1.79e-11,43;CL:0000221,3.35e-11,44;CL:0000133,3.35e-11,44;CL:0002321,8.05e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!7.95e-15!6;UBERON:0005174!7.95e-15!6;UBERON:0001137!7.95e-15!6;UBERON:0001948!1.06e-12!5;UBERON:0002315!1.06e-12!5;UBERON:0001017!1.56e-12!73;UBERON:0005743!1.56e-12!73;UBERON:0003076!3.26e-12!12;UBERON:0003057!3.26e-12!12;UBERON:0002020!4.04e-12!34;UBERON:0000073!4.89e-12!75;UBERON:0001016!4.89e-12!75;UBERON:0001049!9.49e-12!52;UBERON:0005068!9.49e-12!52;UBERON:0006241!9.49e-12!52;UBERON:0007135!9.49e-12!52;UBERON:0002021!2.51e-10!10;UBERON:0000411!2.51e-10!10;UBERON:0001950!2.51e-10!10;UBERON:0002346!2.17e-09!71;UBERON:0003075!2.17e-09!71;UBERON:0007284!2.17e-09!71;UBERON:0004121!4.59e-09!102;UBERON:0000924!4.59e-09!102;UBERON:0006601!4.59e-09!102;UBERON:0002257!2.52e-08!3;UBERON:0002616!6.93e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.57e-48,6;UBERON:0005174,2.57e-48,6;UBERON:0001137,2.57e-48,6;UBERON:0003076,1.99e-42,12;UBERON:0003057,1.99e-42,12;UBERON:0001948,8.78e-41,5;UBERON:0002315,8.78e-41,5;UBERON:0002257,2.56e-25,3;UBERON:0002256,3.95e-17,2;UBERON:0001896,6.88e-17,2;UBERON:0002298,6.88e-17,2;UBERON:0005290,6.88e-17,2;UBERON:0010096,6.88e-17,2;UBERON:0000489,8.81e-14,21;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0001049,6.26e-12,52;UBERON:0005068,6.26e-12,52;UBERON:0006241,6.26e-12,52;UBERON:0007135,6.26e-12,52;UBERON:0000073,2.00e-11,54;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0002020,2.07e-08,34;UBERON:0010371,2.67e-08,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,0,0,0,2.28520787523043,3.53389665522582,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,1.3959149950069,0,0,4.41942878210502,3.55929201997757,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0.347648640384553,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0.38581844092741,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p12@6330527O06Rik | |||
}} |
Revision as of 22:12, 13 September 2013
Short description: | p12@6330527O06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_6330527O06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2330 |
Association with transcript: | -203bp_to_ENSMUST00000057503, NM_029530, uc008mog.1_5end |
EntrezGene: | 6330527O06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.56e-25 | 3 |
CNS neuron (sensu Vertebrata) | 7.55e-22 | 23 |
neuroblast (sensu Vertebrata) | 7.55e-22 | 23 |
neuron of the dorsal spinal cord | 3.95e-17 | 2 |
neuron | 4.23e-15 | 33 |
neuronal stem cell | 4.23e-15 | 33 |
neuroblast | 4.23e-15 | 33 |
electrically signaling cell | 4.23e-15 | 33 |
electrically responsive cell | 1.05e-12 | 39 |
electrically active cell | 1.05e-12 | 39 |
neural cell | 1.79e-11 | 43 |
ectodermal cell | 3.35e-11 | 44 |
neurectodermal cell | 3.35e-11 | 44 |
embryonic cell | 8.05e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.57e-48 | 6 |
dorsal region element | 2.57e-48 | 6 |
dorsum | 2.57e-48 | 6 |
posterior neural tube | 1.99e-42 | 12 |
chordal neural plate | 1.99e-42 | 12 |
regional part of spinal cord | 8.78e-41 | 5 |
gray matter of spinal cord | 8.78e-41 | 5 |
ventral horn of spinal cord | 2.56e-25 | 3 |
dorsal horn of spinal cord | 3.95e-17 | 2 |
medulla oblongata | 6.88e-17 | 2 |
brainstem | 6.88e-17 | 2 |
myelencephalon | 6.88e-17 | 2 |
future myelencephalon | 6.88e-17 | 2 |
cavitated compound organ | 8.81e-14 | 21 |
central nervous system | 1.39e-12 | 73 |
nervous system | 3.15e-12 | 75 |
neural tube | 6.26e-12 | 52 |
neural rod | 6.26e-12 | 52 |
future spinal cord | 6.26e-12 | 52 |
neural keel | 6.26e-12 | 52 |
regional part of nervous system | 2.00e-11 | 54 |
neurectoderm | 1.44e-09 | 64 |
neural plate | 1.44e-09 | 64 |
presumptive neural plate | 1.44e-09 | 64 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
gray matter | 2.07e-08 | 34 |
ecto-epithelium | 2.67e-08 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.