FFCP PHASE1:Mm9::chr2:105515793..105515808,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18508|HGNC=|MCL_coexpression_id=2321|UniProt=Q8VBX9|association_with_transcript=87bp_to_ENSMUST00000171744_5end|description=CAGE_peak_3_at_Pax6_5end|id=chr2:105515793..105515808,+|ontology_enrichment_celltype=CL:0000117!3.87e-11!23;CL:0000337!3.87e-11!23;CL:0002319!9.95e-09!43;CL:0000221!2.59e-08!44;CL:0000133!2.59e-08!44;CL:0000055!9.82e-07!50|ontology_enrichment_celltype_v019_2=CL:0002453,5.04e-08,8;CL:0002319,3.28e-07,43;CL:0000221,6.15e-07,44;CL:0000133,6.15e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.39e-37!63;UBERON:0003056!3.83e-35!49;UBERON:0002346!3.20e-34!71;UBERON:0003075!3.20e-34!71;UBERON:0007284!3.20e-34!71;UBERON:0001049!4.01e-33!52;UBERON:0005068!4.01e-33!52;UBERON:0006241!4.01e-33!52;UBERON:0007135!4.01e-33!52;UBERON:0000955!3.00e-32!50;UBERON:0006238!3.00e-32!50;UBERON:0002616!2.89e-31!49;UBERON:0001017!3.42e-30!73;UBERON:0005743!3.42e-30!73;UBERON:0000073!1.35e-29!75;UBERON:0001016!1.35e-29!75;UBERON:0004121!8.30e-28!102;UBERON:0000924!8.30e-28!102;UBERON:0006601!8.30e-28!102;UBERON:0003080!5.68e-26!40;UBERON:0002780!1.03e-25!39;UBERON:0001890!1.03e-25!39;UBERON:0006240!1.03e-25!39;UBERON:0007811!1.31e-22!86;UBERON:0002020!4.05e-21!34;UBERON:0000153!9.96e-19!94;UBERON:0002791!2.08e-18!29;UBERON:0003528!2.08e-18!29;UBERON:0001893!2.08e-18!29;UBERON:0000956!5.23e-15!21;UBERON:0001869!5.23e-15!21;UBERON:0000203!5.23e-15!21;UBERON:0002619!5.53e-12!17;UBERON:0000970!9.03e-10!9;UBERON:0000019!9.03e-10!9;UBERON:0000047!9.03e-10!9;UBERON:0004088!9.03e-10!9;UBERON:0002104!9.03e-10!9;UBERON:0001456!9.03e-10!9;UBERON:0003072!9.03e-10!9;UBERON:0003071!9.03e-10!9;UBERON:0004128!9.03e-10!9;UBERON:0001894!3.89e-08!10;UBERON:0006222!3.89e-08!10;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10;UBERON:0003076!1.85e-07!12;UBERON:0003057!1.85e-07!12;UBERON:0001444!2.47e-07!11;UBERON:0000007!6.56e-07!8;UBERON:0003296!6.56e-07!8;UBERON:0010133!6.56e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.34e-47,64;UBERON:0003075,1.34e-47,64;UBERON:0007284,1.34e-47,64;UBERON:0003056,4.77e-42,49;UBERON:0010371,5.84e-40,73;UBERON:0004121,2.31e-38,95;UBERON:0000924,2.31e-38,95;UBERON:0006601,2.31e-38,95;UBERON:0000073,1.13e-36,54;UBERON:0001049,1.42e-36,52;UBERON:0005068,1.42e-36,52;UBERON:0006241,1.42e-36,52;UBERON:0007135,1.42e-36,52;UBERON:0000955,1.78e-35,47;UBERON:0006238,1.78e-35,47;UBERON:0002616,4.85e-34,46;UBERON:0001017,1.16e-33,73;UBERON:0001016,2.12e-32,75;UBERON:0002780,1.68e-29,39;UBERON:0001890,1.68e-29,39;UBERON:0006240,1.68e-29,39;UBERON:0010314,9.39e-29,92;UBERON:0003080,1.62e-28,40;UBERON:0002020,8.07e-20,34;UBERON:0003528,1.34e-18,29;UBERON:0002791,1.34e-18,29;UBERON:0001893,1.34e-18,29;UBERON:0000956,1.30e-17,21;UBERON:0001869,1.30e-17,21;UBERON:0000203,1.30e-17,21;UBERON:0000970,1.27e-14,9;UBERON:0000019,1.27e-14,9;UBERON:0000047,1.27e-14,9;UBERON:0010312,1.27e-14,9;UBERON:0004088,1.27e-14,9;UBERON:0002104,1.27e-14,9;UBERON:0001456,1.27e-14,9;UBERON:0003072,1.27e-14,9;UBERON:0004128,1.27e-14,9;UBERON:0003071,1.27e-14,9;UBERON:0002619,5.05e-13,17;UBERON:0001894,5.01e-12,10;UBERON:0006222,5.01e-12,10;UBERON:0001444,1.69e-11,11;UBERON:0000025,2.48e-10,114;UBERON:0000020,2.49e-10,12;UBERON:0001032,2.49e-10,12;UBERON:0004456,2.49e-10,12;UBERON:0000007,4.41e-10,8;UBERON:0003296,4.41e-10,8;UBERON:0010133,4.41e-10,8;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0000033,2.40e-09,13;UBERON:0005085,2.40e-09,13;UBERON:0004111,6.01e-09,122;UBERON:0000483,1.06e-08,174;UBERON:0000119,1.87e-08,176;UBERON:0003076,3.31e-08,12;UBERON:0003057,3.31e-08,12|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,4.39372365468944,6.41618666945135,1.39986421625363,4.31257693094915,0,0,0,0.257259436035947,0,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,1.79760066311043,1.92109152660777,4.35496371695606,4.18518408828241,2.10324961351382,0.571301968807607,0.883474163806454,0.857435594504678,0.670918297127655,1.83843757322004,2.20231761998777,2.042997409363,0.921639199537461,1.18697658957174,1.18933936683133,0.52091337055676,1.11673199600552,0.56276261003168,1.22238598221448,1.47314292736834,2.84743361598206,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,21.6657789788545,20.3163305609051,0,0,0,0,0.449371918214468,1.37250180845588,0.879580464790051,2.43354048269187,2.81287003063364,2.0778804455956,2.10913641988085,0,0,0,49.4538361333214,11.840960309606,4.36813998423599,9.36323074987816,9.79581315932148,18.7100372666152,12.4270308676304,7.77724313845749,23.0245999957724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,2.16099685996497,0,0,0,0,0,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,5.78378369559253,0.141940085208269,0,0,0,2.65490276679926,1.45668381692989,0.906970670894253,1.13163047853539,1.18120757152309,2.45948118355142,0.258428293168221,1.45413491791002,1.06949213515416,0.316036757935816,0,0,2.38307724027652,4.68158844481407,2.58717367565509,2.7863814554107,2.48276327099183,1.07021290561242,3.29098041204242,1.522324745573,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,2.23409137046794,0.685082519770642,2.2661816921691,4.05013500139084,2.2516060161211,3.17199686288943,4.14208249401456,1.764384908931,1.59609949360412,0.682934423016537,0.972426868273176,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,1.01391719956096,0.377252682772152,0,0.704276676453562,0.34461281373368,0,0.115884325944855,0.964546102318525,0,0.441596760403192,0,0.887379030796687,0.476872379894642,0.290692833264657,0.658765662907314,0.338458431566706,0.548783918618318,0.789209134313529,0.814824683075171,0,0.118635018124174,0.29551344712669,0,0,0.385813221962283,0.749431733813838,0.467863216890817,0,0.191288332068843,0,0|short_description=p3@Pax6}} | ||
|EntrezGene=18508 | |||
|HGNC= | |||
|MCL_coexpression_id=2321 | |||
|UniProt=Q8VBX9 | |||
|association_with_transcript=87bp_to_ENSMUST00000171744_5end | |||
|description=CAGE_peak_3_at_Pax6_5end | |||
|id=chr2:105515793..105515808,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.87e-11!23;CL:0000337!3.87e-11!23;CL:0002319!9.95e-09!43;CL:0000221!2.59e-08!44;CL:0000133!2.59e-08!44;CL:0000055!9.82e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,5.04e-08,8;CL:0002319,3.28e-07,43;CL:0000221,6.15e-07,44;CL:0000133,6.15e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.39e-37!63;UBERON:0003056!3.83e-35!49;UBERON:0002346!3.20e-34!71;UBERON:0003075!3.20e-34!71;UBERON:0007284!3.20e-34!71;UBERON:0001049!4.01e-33!52;UBERON:0005068!4.01e-33!52;UBERON:0006241!4.01e-33!52;UBERON:0007135!4.01e-33!52;UBERON:0000955!3.00e-32!50;UBERON:0006238!3.00e-32!50;UBERON:0002616!2.89e-31!49;UBERON:0001017!3.42e-30!73;UBERON:0005743!3.42e-30!73;UBERON:0000073!1.35e-29!75;UBERON:0001016!1.35e-29!75;UBERON:0004121!8.30e-28!102;UBERON:0000924!8.30e-28!102;UBERON:0006601!8.30e-28!102;UBERON:0003080!5.68e-26!40;UBERON:0002780!1.03e-25!39;UBERON:0001890!1.03e-25!39;UBERON:0006240!1.03e-25!39;UBERON:0007811!1.31e-22!86;UBERON:0002020!4.05e-21!34;UBERON:0000153!9.96e-19!94;UBERON:0002791!2.08e-18!29;UBERON:0003528!2.08e-18!29;UBERON:0001893!2.08e-18!29;UBERON:0000956!5.23e-15!21;UBERON:0001869!5.23e-15!21;UBERON:0000203!5.23e-15!21;UBERON:0002619!5.53e-12!17;UBERON:0000970!9.03e-10!9;UBERON:0000019!9.03e-10!9;UBERON:0000047!9.03e-10!9;UBERON:0004088!9.03e-10!9;UBERON:0002104!9.03e-10!9;UBERON:0001456!9.03e-10!9;UBERON:0003072!9.03e-10!9;UBERON:0003071!9.03e-10!9;UBERON:0004128!9.03e-10!9;UBERON:0001894!3.89e-08!10;UBERON:0006222!3.89e-08!10;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10;UBERON:0003076!1.85e-07!12;UBERON:0003057!1.85e-07!12;UBERON:0001444!2.47e-07!11;UBERON:0000007!6.56e-07!8;UBERON:0003296!6.56e-07!8;UBERON:0010133!6.56e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.34e-47,64;UBERON:0003075,1.34e-47,64;UBERON:0007284,1.34e-47,64;UBERON:0003056,4.77e-42,49;UBERON:0010371,5.84e-40,73;UBERON:0004121,2.31e-38,95;UBERON:0000924,2.31e-38,95;UBERON:0006601,2.31e-38,95;UBERON:0000073,1.13e-36,54;UBERON:0001049,1.42e-36,52;UBERON:0005068,1.42e-36,52;UBERON:0006241,1.42e-36,52;UBERON:0007135,1.42e-36,52;UBERON:0000955,1.78e-35,47;UBERON:0006238,1.78e-35,47;UBERON:0002616,4.85e-34,46;UBERON:0001017,1.16e-33,73;UBERON:0001016,2.12e-32,75;UBERON:0002780,1.68e-29,39;UBERON:0001890,1.68e-29,39;UBERON:0006240,1.68e-29,39;UBERON:0010314,9.39e-29,92;UBERON:0003080,1.62e-28,40;UBERON:0002020,8.07e-20,34;UBERON:0003528,1.34e-18,29;UBERON:0002791,1.34e-18,29;UBERON:0001893,1.34e-18,29;UBERON:0000956,1.30e-17,21;UBERON:0001869,1.30e-17,21;UBERON:0000203,1.30e-17,21;UBERON:0000970,1.27e-14,9;UBERON:0000019,1.27e-14,9;UBERON:0000047,1.27e-14,9;UBERON:0010312,1.27e-14,9;UBERON:0004088,1.27e-14,9;UBERON:0002104,1.27e-14,9;UBERON:0001456,1.27e-14,9;UBERON:0003072,1.27e-14,9;UBERON:0004128,1.27e-14,9;UBERON:0003071,1.27e-14,9;UBERON:0002619,5.05e-13,17;UBERON:0001894,5.01e-12,10;UBERON:0006222,5.01e-12,10;UBERON:0001444,1.69e-11,11;UBERON:0000025,2.48e-10,114;UBERON:0000020,2.49e-10,12;UBERON:0001032,2.49e-10,12;UBERON:0004456,2.49e-10,12;UBERON:0000007,4.41e-10,8;UBERON:0003296,4.41e-10,8;UBERON:0010133,4.41e-10,8;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0000033,2.40e-09,13;UBERON:0005085,2.40e-09,13;UBERON:0004111,6.01e-09,122;UBERON:0000483,1.06e-08,174;UBERON:0000119,1.87e-08,176;UBERON:0003076,3.31e-08,12;UBERON:0003057,3.31e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,4.39372365468944,6.41618666945135,1.39986421625363,4.31257693094915,0,0,0,0.257259436035947,0,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,1.79760066311043,1.92109152660777,4.35496371695606,4.18518408828241,2.10324961351382,0.571301968807607,0.883474163806454,0.857435594504678,0.670918297127655,1.83843757322004,2.20231761998777,2.042997409363,0.921639199537461,1.18697658957174,1.18933936683133,0.52091337055676,1.11673199600552,0.56276261003168,1.22238598221448,1.47314292736834,2.84743361598206,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,21.6657789788545,20.3163305609051,0,0,0,0,0.449371918214468,1.37250180845588,0.879580464790051,2.43354048269187,2.81287003063364,2.0778804455956,2.10913641988085,0,0,0,49.4538361333214,11.840960309606,4.36813998423599,9.36323074987816,9.79581315932148,18.7100372666152,12.4270308676304,7.77724313845749,23.0245999957724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,2.16099685996497,0,0,0,0,0,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,5.78378369559253,0.141940085208269,0,0,0,2.65490276679926,1.45668381692989,0.906970670894253,1.13163047853539,1.18120757152309,2.45948118355142,0.258428293168221,1.45413491791002,1.06949213515416,0.316036757935816,0,0,2.38307724027652,4.68158844481407,2.58717367565509,2.7863814554107,2.48276327099183,1.07021290561242,3.29098041204242,1.522324745573,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,2.23409137046794,0.685082519770642,2.2661816921691,4.05013500139084,2.2516060161211,3.17199686288943,4.14208249401456,1.764384908931,1.59609949360412,0.682934423016537,0.972426868273176,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,1.01391719956096,0.377252682772152,0,0.704276676453562,0.34461281373368,0,0.115884325944855,0.964546102318525,0,0.441596760403192,0,0.887379030796687,0.476872379894642,0.290692833264657,0.658765662907314,0.338458431566706,0.548783918618318,0.789209134313529,0.814824683075171,0,0.118635018124174,0.29551344712669,0,0,0.385813221962283,0.749431733813838,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p3@Pax6 | |||
}} |
Revision as of 21:32, 13 September 2013
Short description: | p3@Pax6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pax6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2321 |
Association with transcript: | 87bp_to_ENSMUST00000171744_5end |
EntrezGene: | Pax6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 5.04e-08 | 8 |
neural cell | 3.28e-07 | 43 |
ectodermal cell | 6.15e-07 | 44 |
neurectodermal cell | 6.15e-07 | 44 |
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.