FFCP PHASE1:Mm9::chr2:105500930..105500942,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=133|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:105500930..105500942,+|id=chr2:105500930..105500942,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.86e-30!9;UBERON:0000019!1.86e-30!9;UBERON:0000047!1.86e-30!9;UBERON:0004088!1.86e-30!9;UBERON:0002104!1.86e-30!9;UBERON:0001456!1.86e-30!9;UBERON:0003072!1.86e-30!9;UBERON:0003071!1.86e-30!9;UBERON:0004128!1.86e-30!9;UBERON:0001444!1.24e-24!11;UBERON:0000020!1.90e-22!12;UBERON:0001032!1.90e-22!12;UBERON:0004456!1.90e-22!12;UBERON:0005085!1.34e-20!13;UBERON:0003056!3.68e-09!49|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.18e-59,9;UBERON:0000019,2.18e-59,9;UBERON:0000047,2.18e-59,9;UBERON:0010312,2.18e-59,9;UBERON:0004088,2.18e-59,9;UBERON:0002104,2.18e-59,9;UBERON:0001456,2.18e-59,9;UBERON:0003072,2.18e-59,9;UBERON:0004128,2.18e-59,9;UBERON:0003071,2.18e-59,9;UBERON:0001444,1.18e-48,11;UBERON:0000020,1.26e-44,12;UBERON:0001032,1.26e-44,12;UBERON:0004456,1.26e-44,12;UBERON:0000033,3.24e-41,13;UBERON:0005085,3.24e-41,13;UBERON:0007811,5.59e-15,36;UBERON:0003056,2.84e-14,49;UBERON:0000153,1.52e-12,43;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,3.6433724029557,2.75882525320168,3.06105620669094,3.16480117455002,2.38127747029647,2.8185018462667,1.78033276663485,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr2:105500930..105500942,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=133 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:105500930..105500942,+ | |||
|id=chr2:105500930..105500942,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.86e-30!9;UBERON:0000019!1.86e-30!9;UBERON:0000047!1.86e-30!9;UBERON:0004088!1.86e-30!9;UBERON:0002104!1.86e-30!9;UBERON:0001456!1.86e-30!9;UBERON:0003072!1.86e-30!9;UBERON:0003071!1.86e-30!9;UBERON:0004128!1.86e-30!9;UBERON:0001444!1.24e-24!11;UBERON:0000020!1.90e-22!12;UBERON:0001032!1.90e-22!12;UBERON:0004456!1.90e-22!12;UBERON:0005085!1.34e-20!13;UBERON:0003056!3.68e-09!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.18e-59,9;UBERON:0000019,2.18e-59,9;UBERON:0000047,2.18e-59,9;UBERON:0010312,2.18e-59,9;UBERON:0004088,2.18e-59,9;UBERON:0002104,2.18e-59,9;UBERON:0001456,2.18e-59,9;UBERON:0003072,2.18e-59,9;UBERON:0004128,2.18e-59,9;UBERON:0003071,2.18e-59,9;UBERON:0001444,1.18e-48,11;UBERON:0000020,1.26e-44,12;UBERON:0001032,1.26e-44,12;UBERON:0004456,1.26e-44,12;UBERON:0000033,3.24e-41,13;UBERON:0005085,3.24e-41,13;UBERON:0007811,5.59e-15,36;UBERON:0003056,2.84e-14,49;UBERON:0000153,1.52e-12,43;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,3.6433724029557,2.75882525320168,3.06105620669094,3.16480117455002,2.38127747029647,2.8185018462667,1.78033276663485,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr2:105500930..105500942,+ | |||
}} |
Revision as of 21:32, 13 September 2013
Short description: | p@chr2:105500930..105500942, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:105500930..105500942, + |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.18e-59 | 9 |
camera-type eye | 2.18e-59 | 9 |
simple eye | 2.18e-59 | 9 |
immature eye | 2.18e-59 | 9 |
ocular region | 2.18e-59 | 9 |
visual system | 2.18e-59 | 9 |
face | 2.18e-59 | 9 |
optic cup | 2.18e-59 | 9 |
optic vesicle | 2.18e-59 | 9 |
eye primordium | 2.18e-59 | 9 |
subdivision of head | 1.18e-48 | 11 |
sense organ | 1.26e-44 | 12 |
sensory system | 1.26e-44 | 12 |
entire sense organ system | 1.26e-44 | 12 |
head | 3.24e-41 | 13 |
ectodermal placode | 3.24e-41 | 13 |
craniocervical region | 5.59e-15 | 36 |
pre-chordal neural plate | 2.84e-14 | 49 |
anterior region of body | 1.52e-12 | 43 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.