FFCP PHASE1:Mm9::chr1:36331315..36331341,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3263|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:36331315..36331341,-|id=chr1:36331315..36331341,-|ontology_enrichment_celltype=CL:0002563!3.26e-09!9;CL:0002251!3.26e-09!9|ontology_enrichment_celltype_v019_2=CL:0002563,5.02e-16,9;CL:0002251,5.02e-16,9;CL:0000239,3.75e-11,6;CL:0000677,3.75e-11,6;CL:0000584,3.75e-11,6;CL:0000075,1.96e-09,7;CL:0002076,7.75e-09,15;CL:0000066,2.45e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.43e-18!59;UBERON:0000160!3.06e-15!43;UBERON:0000344!1.52e-14!15;UBERON:0001242!8.38e-13!13;UBERON:0000060!8.38e-13!13;UBERON:0001262!8.38e-13!13;UBERON:0004786!8.38e-13!13;UBERON:0001007!3.47e-12!128;UBERON:0001555!3.47e-12!128;UBERON:0007026!3.47e-12!128;UBERON:0004119!1.08e-11!130;UBERON:0000925!1.08e-11!130;UBERON:0006595!1.08e-11!130;UBERON:0004921!4.83e-11!126;UBERON:0004185!4.83e-11!126;UBERON:0003350!3.26e-09!9;UBERON:0004808!3.26e-09!9;UBERON:0001277!3.26e-09!9;UBERON:0004923!1.12e-08!24;UBERON:0000485!5.57e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.44e-45,31;UBERON:0005409,7.84e-41,47;UBERON:0000344,3.99e-26,15;UBERON:0001242,8.05e-23,13;UBERON:0001262,8.05e-23,13;UBERON:0004786,8.05e-23,13;UBERON:0003350,5.02e-16,9;UBERON:0004808,5.02e-16,9;UBERON:0001277,5.02e-16,9;UBERON:0001007,2.79e-15,116;UBERON:0001555,2.79e-15,116;UBERON:0007026,2.79e-15,116;UBERON:0004119,7.36e-15,118;UBERON:0000925,7.36e-15,118;UBERON:0006595,7.36e-15,118;UBERON:0004923,8.25e-15,24;UBERON:0004921,1.89e-13,114;UBERON:0000485,9.42e-13,11;UBERON:0002108,2.00e-08,4;UBERON:0000331,7.16e-07,3;UBERON:0002116,7.16e-07,3;UBERON:0001204,7.16e-07,3;UBERON:0001168,7.16e-07,3|phase1_expression=0,4.53668029931169,3.18499467572675,7.86406949397758,8.5152274090879,7.05092942029937,4.20502753071946,1.80772652818207,0.985521055061667,0.468129052643987,0,0.159544317990673,2.56801094896809,2.79745287740792,0,0.202475267389826,0.699561878128147,0.315462165358238,0.274228867211478,0,0,0,0.261199789138935,5.27974995218242,5.73523202667925,4.01962374880514,5.1691439539089,5.17130958446134,7.22088993934221,9.57714493087737,5.32153225572731,0,0,0,8.37669697278696,3.49092755252834,6.12508068787107,2.92972141515835,0,2.09409497589519,7.05877785637217,6.14740936462601,6.311634589405,0,0,0,0,0,0,0,0,0,0.167782606057736,5.80289713609076,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0.432982082022428,0,0,1.59857431606684,0.517875767294343,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,11.1835056730873,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.29544417878937,7.66906643324278,0,0,2.19074684247559,5.64713868945359,4.66993892074228,4.1849637744763,4.74529061544512,3.45867804920423,2.26201687920243,4.77495532898762,3.11942539390592,4.49409704327111,7.13255564586491,8.56307474993779,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,5.24665505933731,0,0,0,0.185194527369712,0.188368457004691,0,0,0.679913719975421,0.839708713941948,0.690999869022119,2.86401185404534,0,0.203319467126849,1.18805874903981,1.88179466413022,1.09181281873089,1.07891477107857,0.909188012978695,0.785267825952089,11.6653475962614,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.320125762024346,0.114870937911227,0,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr1:36331315..36331341,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3263 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:36331315..36331341,- | |||
|id=chr1:36331315..36331341,- | |||
|ontology_enrichment_celltype=CL:0002563!3.26e-09!9;CL:0002251!3.26e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.02e-16,9;CL:0002251,5.02e-16,9;CL:0000239,3.75e-11,6;CL:0000677,3.75e-11,6;CL:0000584,3.75e-11,6;CL:0000075,1.96e-09,7;CL:0002076,7.75e-09,15;CL:0000066,2.45e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.43e-18!59;UBERON:0000160!3.06e-15!43;UBERON:0000344!1.52e-14!15;UBERON:0001242!8.38e-13!13;UBERON:0000060!8.38e-13!13;UBERON:0001262!8.38e-13!13;UBERON:0004786!8.38e-13!13;UBERON:0001007!3.47e-12!128;UBERON:0001555!3.47e-12!128;UBERON:0007026!3.47e-12!128;UBERON:0004119!1.08e-11!130;UBERON:0000925!1.08e-11!130;UBERON:0006595!1.08e-11!130;UBERON:0004921!4.83e-11!126;UBERON:0004185!4.83e-11!126;UBERON:0003350!3.26e-09!9;UBERON:0004808!3.26e-09!9;UBERON:0001277!3.26e-09!9;UBERON:0004923!1.12e-08!24;UBERON:0000485!5.57e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.44e-45,31;UBERON:0005409,7.84e-41,47;UBERON:0000344,3.99e-26,15;UBERON:0001242,8.05e-23,13;UBERON:0001262,8.05e-23,13;UBERON:0004786,8.05e-23,13;UBERON:0003350,5.02e-16,9;UBERON:0004808,5.02e-16,9;UBERON:0001277,5.02e-16,9;UBERON:0001007,2.79e-15,116;UBERON:0001555,2.79e-15,116;UBERON:0007026,2.79e-15,116;UBERON:0004119,7.36e-15,118;UBERON:0000925,7.36e-15,118;UBERON:0006595,7.36e-15,118;UBERON:0004923,8.25e-15,24;UBERON:0004921,1.89e-13,114;UBERON:0000485,9.42e-13,11;UBERON:0002108,2.00e-08,4;UBERON:0000331,7.16e-07,3;UBERON:0002116,7.16e-07,3;UBERON:0001204,7.16e-07,3;UBERON:0001168,7.16e-07,3 | |||
|phase1_expression=0,4.53668029931169,3.18499467572675,7.86406949397758,8.5152274090879,7.05092942029937,4.20502753071946,1.80772652818207,0.985521055061667,0.468129052643987,0,0.159544317990673,2.56801094896809,2.79745287740792,0,0.202475267389826,0.699561878128147,0.315462165358238,0.274228867211478,0,0,0,0.261199789138935,5.27974995218242,5.73523202667925,4.01962374880514,5.1691439539089,5.17130958446134,7.22088993934221,9.57714493087737,5.32153225572731,0,0,0,8.37669697278696,3.49092755252834,6.12508068787107,2.92972141515835,0,2.09409497589519,7.05877785637217,6.14740936462601,6.311634589405,0,0,0,0,0,0,0,0,0,0.167782606057736,5.80289713609076,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0.432982082022428,0,0,1.59857431606684,0.517875767294343,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,11.1835056730873,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.29544417878937,7.66906643324278,0,0,2.19074684247559,5.64713868945359,4.66993892074228,4.1849637744763,4.74529061544512,3.45867804920423,2.26201687920243,4.77495532898762,3.11942539390592,4.49409704327111,7.13255564586491,8.56307474993779,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,5.24665505933731,0,0,0,0.185194527369712,0.188368457004691,0,0,0.679913719975421,0.839708713941948,0.690999869022119,2.86401185404534,0,0.203319467126849,1.18805874903981,1.88179466413022,1.09181281873089,1.07891477107857,0.909188012978695,0.785267825952089,11.6653475962614,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.320125762024346,0.114870937911227,0,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr1:36331315..36331341,- | |||
}} |
Revision as of 20:17, 13 September 2013
Short description: | p@chr1:36331315..36331341, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:36331315..36331341, - |
Coexpression cluster: | MCL_coexpression_mm9:3263 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.02e-16 | 9 |
epithelial cell of alimentary canal | 5.02e-16 | 9 |
brush border epithelial cell | 3.75e-11 | 6 |
gut absorptive cell | 3.75e-11 | 6 |
enterocyte | 3.75e-11 | 6 |
columnar/cuboidal epithelial cell | 1.96e-09 | 7 |
endo-epithelial cell | 7.75e-09 | 15 |
epithelial cell | 2.45e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.44e-45 | 31 |
gastrointestinal system | 7.84e-41 | 47 |
mucosa | 3.99e-26 | 15 |
intestinal mucosa | 8.05e-23 | 13 |
wall of intestine | 8.05e-23 | 13 |
gastrointestinal system mucosa | 8.05e-23 | 13 |
epithelium of mucosa | 5.02e-16 | 9 |
gastrointestinal system epithelium | 5.02e-16 | 9 |
intestinal epithelium | 5.02e-16 | 9 |
digestive system | 2.79e-15 | 116 |
digestive tract | 2.79e-15 | 116 |
primitive gut | 2.79e-15 | 116 |
endoderm-derived structure | 7.36e-15 | 118 |
endoderm | 7.36e-15 | 118 |
presumptive endoderm | 7.36e-15 | 118 |
organ component layer | 8.25e-15 | 24 |
subdivision of digestive tract | 1.89e-13 | 114 |
simple columnar epithelium | 9.42e-13 | 11 |
small intestine | 2.00e-08 | 4 |
ileal mucosa | 7.16e-07 | 3 |
ileum | 7.16e-07 | 3 |
mucosa of small intestine | 7.16e-07 | 3 |
wall of small intestine | 7.16e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.