FFCP PHASE1:Hg19::chr6:24489842..24489859,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2822|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4459|TSSclassifier=S|UniProt=P80108|association_with_transcript=0bp_to_ENST00000230036,NM_001503,uc003ned.1,uc003nee.2,uc010jps.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_7_at_GPLD1_5end|id=chr6:24489842..24489859,-|ontology_enrichment_celltype=CL:0000181!2.97e-12!12;CL:0000417!2.97e-12!12;CL:0000668!2.97e-12!12;CL:0000414!2.97e-12!12;CL:0000412!2.97e-12!12;CL:0000182!2.97e-12!12;CL:0001014!6.42e-09!2;CL:0001016!6.42e-09!2|ontology_enrichment_celltype_v019=CL:0000182;6.79e-22;12|ontology_enrichment_celltype_v019_2=CL:0000182,6.79e-22,12|ontology_enrichment_development_v019=UBERON:0004161;3.06e-11;11!UBERON:0009497;1.16e-09;13|ontology_enrichment_disease=DOID:1799!2.25e-16!1;DOID:10165!2.25e-16!1;DOID:1798!2.25e-16!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!2.30e-28!26;UBERON:0000949!4.36e-21!45;UBERON:0002368!5.43e-21!35;UBERON:0002107!2.42e-20!19;UBERON:0006925!2.42e-20!19;UBERON:0008836!2.42e-20!19;UBERON:0008835!1.39e-17!22;UBERON:0003894!1.39e-17!22;UBERON:0003929!1.84e-17!54;UBERON:0009854!8.02e-17!23;UBERON:0002370!5.26e-16!4;UBERON:0005058!5.26e-16!4;UBERON:0009113!5.26e-16!4;UBERON:0003295!5.26e-16!4;UBERON:0005562!5.26e-16!4;UBERON:0002530!6.22e-16!59;UBERON:0007499!1.75e-15!25;UBERON:0009497!1.75e-15!25;UBERON:0000015!1.75e-15!25;UBERON:0002423!1.75e-15!25;UBERON:0006235!1.75e-15!25;UBERON:0004161!1.75e-15!25;UBERON:0009856!6.87e-15!26;UBERON:0002365!1.70e-12!31;UBERON:0002330!1.70e-12!31;UBERON:0005911!2.74e-11!82;UBERON:0003351!5.36e-11!6;UBERON:0004177!1.47e-09!7;UBERON:0001041!2.40e-09!98;UBERON:0000077!1.08e-08!130;UBERON:0004921!1.08e-08!129;UBERON:0004185!1.08e-08!129;UBERON:0002405!8.54e-08!115;UBERON:0001007!4.29e-07!155;UBERON:0001555!4.29e-07!155;UBERON:0007026!4.29e-07!155;UBERON:0005172!4.96e-07!55;UBERON:0005173!4.96e-07!55;UBERON:0000974!5.94e-07!10;UBERON:0003408!5.94e-07!10;UBERON:0001042!5.94e-07!10;UBERON:0009145!5.94e-07!10|ontology_enrichment_uberon_v019=UBERON:0002107;2.90e-37;19!UBERON:0006925;2.90e-37;19!UBERON:0002423;1.85e-28;25!UBERON:0002365;5.53e-23;31!UBERON:0002330;5.53e-23;31!UBERON:0002368;7.29e-20;33!UBERON:0000949;2.11e-14;43!UBERON:0005172;2.18e-10;52!UBERON:0005173;2.18e-10;52!UBERON:0002417;4.81e-08;58!UBERON:0000916;4.81e-08;58!UBERON:0002530;1.37e-07;57!UBERON:0001007;1.85e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.01e-37,19;UBERON:0006925,3.01e-37,19;UBERON:0008836,3.01e-37,19;UBERON:0008835,3.00e-32,22;UBERON:0003894,3.00e-32,22;UBERON:0009854,7.15e-31,23;UBERON:0007499,1.90e-28,25;UBERON:0009497,1.90e-28,25;UBERON:0000015,1.90e-28,25;UBERON:0002423,1.90e-28,25;UBERON:0006235,1.90e-28,25;UBERON:0004161,1.90e-28,25;UBERON:0009856,2.25e-27,26;UBERON:0002365,4.83e-23,31;UBERON:0002330,4.83e-23,31;UBERON:0002368,1.83e-20,35;UBERON:0000949,5.15e-16,45;UBERON:0003929,2.07e-13,54;UBERON:0005172,2.07e-13,54;UBERON:0005173,2.07e-13,54;UBERON:0002530,2.64e-12,59;UBERON:0002417,4.17e-12,60;UBERON:0000916,4.17e-12,60;UBERON:0005911,6.11e-09,82;UBERON:0001041,1.93e-08,87;UBERON:0005177,2.64e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0132552232746,4.91413608338813,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3345112812494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7323932885528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1121041237877,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4459 | |||
|TSSclassifier=S | |||
|UniProt=P80108 | |||
|association_with_transcript=0bp_to_ENST00000230036,NM_001503,uc003ned.1,uc003nee.2,uc010jps.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_GPLD1_5end | |||
|id=chr6:24489842..24489859,- | |||
|ontology_enrichment_celltype=CL:0000181!2.97e-12!12;CL:0000417!2.97e-12!12;CL:0000668!2.97e-12!12;CL:0000414!2.97e-12!12;CL:0000412!2.97e-12!12;CL:0000182!2.97e-12!12;CL:0001014!6.42e-09!2;CL:0001016!6.42e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.79e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.79e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.06e-11;11!UBERON:0009497;1.16e-09;13 | |||
|ontology_enrichment_disease=DOID:1799!2.25e-16!1;DOID:10165!2.25e-16!1;DOID:1798!2.25e-16!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.30e-28!26;UBERON:0000949!4.36e-21!45;UBERON:0002368!5.43e-21!35;UBERON:0002107!2.42e-20!19;UBERON:0006925!2.42e-20!19;UBERON:0008836!2.42e-20!19;UBERON:0008835!1.39e-17!22;UBERON:0003894!1.39e-17!22;UBERON:0003929!1.84e-17!54;UBERON:0009854!8.02e-17!23;UBERON:0002370!5.26e-16!4;UBERON:0005058!5.26e-16!4;UBERON:0009113!5.26e-16!4;UBERON:0003295!5.26e-16!4;UBERON:0005562!5.26e-16!4;UBERON:0002530!6.22e-16!59;UBERON:0007499!1.75e-15!25;UBERON:0009497!1.75e-15!25;UBERON:0000015!1.75e-15!25;UBERON:0002423!1.75e-15!25;UBERON:0006235!1.75e-15!25;UBERON:0004161!1.75e-15!25;UBERON:0009856!6.87e-15!26;UBERON:0002365!1.70e-12!31;UBERON:0002330!1.70e-12!31;UBERON:0005911!2.74e-11!82;UBERON:0003351!5.36e-11!6;UBERON:0004177!1.47e-09!7;UBERON:0001041!2.40e-09!98;UBERON:0000077!1.08e-08!130;UBERON:0004921!1.08e-08!129;UBERON:0004185!1.08e-08!129;UBERON:0002405!8.54e-08!115;UBERON:0001007!4.29e-07!155;UBERON:0001555!4.29e-07!155;UBERON:0007026!4.29e-07!155;UBERON:0005172!4.96e-07!55;UBERON:0005173!4.96e-07!55;UBERON:0000974!5.94e-07!10;UBERON:0003408!5.94e-07!10;UBERON:0001042!5.94e-07!10;UBERON:0009145!5.94e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.90e-37;19!UBERON:0006925;2.90e-37;19!UBERON:0002423;1.85e-28;25!UBERON:0002365;5.53e-23;31!UBERON:0002330;5.53e-23;31!UBERON:0002368;7.29e-20;33!UBERON:0000949;2.11e-14;43!UBERON:0005172;2.18e-10;52!UBERON:0005173;2.18e-10;52!UBERON:0002417;4.81e-08;58!UBERON:0000916;4.81e-08;58!UBERON:0002530;1.37e-07;57!UBERON:0001007;1.85e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.01e-37,19;UBERON:0006925,3.01e-37,19;UBERON:0008836,3.01e-37,19;UBERON:0008835,3.00e-32,22;UBERON:0003894,3.00e-32,22;UBERON:0009854,7.15e-31,23;UBERON:0007499,1.90e-28,25;UBERON:0009497,1.90e-28,25;UBERON:0000015,1.90e-28,25;UBERON:0002423,1.90e-28,25;UBERON:0006235,1.90e-28,25;UBERON:0004161,1.90e-28,25;UBERON:0009856,2.25e-27,26;UBERON:0002365,4.83e-23,31;UBERON:0002330,4.83e-23,31;UBERON:0002368,1.83e-20,35;UBERON:0000949,5.15e-16,45;UBERON:0003929,2.07e-13,54;UBERON:0005172,2.07e-13,54;UBERON:0005173,2.07e-13,54;UBERON:0002530,2.64e-12,59;UBERON:0002417,4.17e-12,60;UBERON:0000916,4.17e-12,60;UBERON:0005911,6.11e-09,82;UBERON:0001041,1.93e-08,87;UBERON:0005177,2.64e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0132552232746,4.91413608338813,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3345112812494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7323932885528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1121041237877,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.372448285775147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@GPLD1 | |||
}} |
Revision as of 19:39, 13 September 2013
Short description: | p7@GPLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_GPLD1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000230036, NM_001503, uc003ned.1, uc003nee.2, uc010jps.1_5end |
EntrezGene: | GPLD1 |
HGNC: | 4459 |
UniProt: | P80108 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.79e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.01e-37 | 19 |
digestive gland | 3.01e-37 | 19 |
liver bud | 3.01e-37 | 19 |
hepatic diverticulum | 3.00e-32 | 22 |
liver primordium | 3.00e-32 | 22 |
digestive tract diverticulum | 7.15e-31 | 23 |
epithelial sac | 1.90e-28 | 25 |
epithelium of foregut-midgut junction | 1.90e-28 | 25 |
anatomical boundary | 1.90e-28 | 25 |
hepatobiliary system | 1.90e-28 | 25 |
foregut-midgut junction | 1.90e-28 | 25 |
septum transversum | 1.90e-28 | 25 |
sac | 2.25e-27 | 26 |
exocrine gland | 4.83e-23 | 31 |
exocrine system | 4.83e-23 | 31 |
endocrine gland | 1.83e-20 | 35 |
endocrine system | 5.15e-16 | 45 |
gut epithelium | 2.07e-13 | 54 |
abdomen element | 2.07e-13 | 54 |
abdominal segment element | 2.07e-13 | 54 |
gland | 2.64e-12 | 59 |
abdominal segment of trunk | 4.17e-12 | 60 |
abdomen | 4.17e-12 | 60 |
endo-epithelium | 6.11e-09 | 82 |
foregut | 1.93e-08 | 87 |
trunk region element | 2.64e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.