FFCP PHASE1:Mm9::chr1:135936937..135936962,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135936937..135936962,-|id=chr1:135936937..135936962,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,4.02e-15,8;CL:0000333,4.54e-12,10;CL:0000095,4.54e-12,10;CL:0000243,4.54e-12,10;CL:0000123,4.54e-12,10;CL:0000125,4.54e-12,10;CL:0000030,4.54e-12,10;CL:0000339,4.54e-12,10;CL:0002605,3.40e-11,2;CL:0002604,3.40e-11,2;CL:0000878,1.99e-10,2;CL:0000129,1.99e-10,2;CL:0000128,5.48e-08,6;CL:0000126,5.48e-08,6;CL:0000127,5.48e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000026,1.09e-09,12;UBERON:0004708,1.09e-09,12;UBERON:0002101,1.09e-09,12;UBERON:0004357,1.09e-09,12;UBERON:0004347,1.09e-09,12;UBERON:0005732,1.09e-09,12;UBERON:0005733,1.09e-09,12;UBERON:0005418,5.38e-09,5;UBERON:0002472,5.38e-09,5;UBERON:0008784,5.38e-09,5;UBERON:0006058,5.38e-09,5;UBERON:0004709,5.38e-09,5;UBERON:0002529,5.38e-09,5;UBERON:0010538,5.38e-09,5;UBERON:0005420,5.38e-09,5;UBERON:0010758,5.38e-09,5;UBERON:0000978,5.38e-09,5;UBERON:0002103,5.38e-09,5;UBERON:0000376,5.38e-09,5;UBERON:0000154,5.38e-09,5;UBERON:0010709,5.38e-09,5;UBERON:0005730,5.38e-09,5;UBERON:0010707,6.23e-09,13;UBERON:0000310,3.95e-07,6;UBERON:0001443,3.95e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0,1.56478268869608,0.65407546914134,12.3024262331304,11.8602238435313,0.55994568650145,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,1.19840044207362,3.45796474789399,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.61119299110724,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0.376999773989026,0,0.144599356919912,0,2.91180329905337,1.10420759230197,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0.712875546952214,0.746441823660558,0.252722758433675,0,0,0,0.180062129805349,0.452114453507145,0.272145996605311,0.12811372028485,1.12442069471675,0,0,0.189106080167819,0.527853372491847,0,0.278047249225598,2.43776516565517,2.05782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0,0.189709611372772,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0.947457058852424,1.14075483509418,1.01847051465113,0.704070744865506,1.00503754465089,0,0.390267295715598,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.117211686592203,0,3.28212205365685,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.178368817602071,1.31639216481697,0,0.23467170806371,0.21183207086382,0,0,0,0.361877549568935,0.358117032009409,0.492422699235184,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0.44449345560323,0.206035057238894,0,0,0,0.377252682772152,0.280924522409647,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0,0.238436189947321,0,0.376437521661322,0.25384382367503,0,0,0,0,0.118635018124174,0.29551344712669,0,0.464810523557898,1.54325288784913,0,0.701794825336225,0.644613162144895,3.44318997723918,4.63241980150983,3.94175320554716|short_description=p@chr1:135936937..135936962,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:135936937..135936962,- | |||
|id=chr1:135936937..135936962,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.02e-15,8;CL:0000333,4.54e-12,10;CL:0000095,4.54e-12,10;CL:0000243,4.54e-12,10;CL:0000123,4.54e-12,10;CL:0000125,4.54e-12,10;CL:0000030,4.54e-12,10;CL:0000339,4.54e-12,10;CL:0002605,3.40e-11,2;CL:0002604,3.40e-11,2;CL:0000878,1.99e-10,2;CL:0000129,1.99e-10,2;CL:0000128,5.48e-08,6;CL:0000126,5.48e-08,6;CL:0000127,5.48e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,1.09e-09,12;UBERON:0004708,1.09e-09,12;UBERON:0002101,1.09e-09,12;UBERON:0004357,1.09e-09,12;UBERON:0004347,1.09e-09,12;UBERON:0005732,1.09e-09,12;UBERON:0005733,1.09e-09,12;UBERON:0005418,5.38e-09,5;UBERON:0002472,5.38e-09,5;UBERON:0008784,5.38e-09,5;UBERON:0006058,5.38e-09,5;UBERON:0004709,5.38e-09,5;UBERON:0002529,5.38e-09,5;UBERON:0010538,5.38e-09,5;UBERON:0005420,5.38e-09,5;UBERON:0010758,5.38e-09,5;UBERON:0000978,5.38e-09,5;UBERON:0002103,5.38e-09,5;UBERON:0000376,5.38e-09,5;UBERON:0000154,5.38e-09,5;UBERON:0010709,5.38e-09,5;UBERON:0005730,5.38e-09,5;UBERON:0010707,6.23e-09,13;UBERON:0000310,3.95e-07,6;UBERON:0001443,3.95e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0,1.56478268869608,0.65407546914134,12.3024262331304,11.8602238435313,0.55994568650145,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,1.19840044207362,3.45796474789399,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.61119299110724,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0.376999773989026,0,0.144599356919912,0,2.91180329905337,1.10420759230197,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0.712875546952214,0.746441823660558,0.252722758433675,0,0,0,0.180062129805349,0.452114453507145,0.272145996605311,0.12811372028485,1.12442069471675,0,0,0.189106080167819,0.527853372491847,0,0.278047249225598,2.43776516565517,2.05782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0,0.189709611372772,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0.947457058852424,1.14075483509418,1.01847051465113,0.704070744865506,1.00503754465089,0,0.390267295715598,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.117211686592203,0,3.28212205365685,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.178368817602071,1.31639216481697,0,0.23467170806371,0.21183207086382,0,0,0,0.361877549568935,0.358117032009409,0.492422699235184,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0.44449345560323,0.206035057238894,0,0,0,0.377252682772152,0.280924522409647,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0,0.238436189947321,0,0.376437521661322,0.25384382367503,0,0,0,0,0.118635018124174,0.29551344712669,0,0.464810523557898,1.54325288784913,0,0.701794825336225,0.644613162144895,3.44318997723918,4.63241980150983,3.94175320554716 | |||
|short_description=p@chr1:135936937..135936962,- | |||
}} |
Revision as of 18:55, 13 September 2013
Short description: | p@chr1:135936937..135936962, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135936937..135936962, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.02e-15 | 8 |
migratory neural crest cell | 4.54e-12 | 10 |
neuron associated cell | 4.54e-12 | 10 |
glial cell (sensu Vertebrata) | 4.54e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 4.54e-12 | 10 |
glial cell | 4.54e-12 | 10 |
glioblast | 4.54e-12 | 10 |
glioblast (sensu Vertebrata) | 4.54e-12 | 10 |
astrocyte of the cerebral cortex | 3.40e-11 | 2 |
astrocyte of the hippocampus | 3.40e-11 | 2 |
central nervous system macrophage | 1.99e-10 | 2 |
microglial cell | 1.99e-10 | 2 |
oligodendrocyte | 5.48e-08 | 6 |
macroglial cell | 5.48e-08 | 6 |
astrocyte | 5.48e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
appendage | 1.09e-09 | 12 |
paired limb/fin | 1.09e-09 | 12 |
limb | 1.09e-09 | 12 |
paired limb/fin bud | 1.09e-09 | 12 |
limb bud | 1.09e-09 | 12 |
limb/fin field | 1.09e-09 | 12 |
limb field | 1.09e-09 | 12 |
hindlimb bud | 5.38e-09 | 5 |
stylopod | 5.38e-09 | 5 |
lower limb segment | 5.38e-09 | 5 |
multi-limb segment region | 5.38e-09 | 5 |
pelvic appendage | 5.38e-09 | 5 |
limb segment | 5.38e-09 | 5 |
paired limb/fin segment | 5.38e-09 | 5 |
pelvic appendage bud | 5.38e-09 | 5 |
subdivision of organism along appendicular axis | 5.38e-09 | 5 |
leg | 5.38e-09 | 5 |
hindlimb | 5.38e-09 | 5 |
hindlimb stylopod | 5.38e-09 | 5 |
posterior region of body | 5.38e-09 | 5 |
pelvic complex | 5.38e-09 | 5 |
hindlimb/pelvic fin field | 5.38e-09 | 5 |
appendage girdle complex | 6.23e-09 | 13 |
breast | 3.95e-07 | 6 |
chest | 3.95e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.