FFCP PHASE1:Hg19::chr6:134639140..134639171,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6446|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10810|TSSclassifier=S|UniProt=O00141,Q7Z3I4|association_with_transcript=24bp_to_ENST00000367858,NM_001143676,uc003qeo.3,uc003qep.2_5end|coexpression_cluster_id=C701|description=CAGE_peak_7_at_SGK1_5end|id=chr6:134639140..134639171,-|ontology_enrichment_celltype=CL:0002274!2.25e-07!5;CL:0000457!2.25e-07!5;CL:0002191!2.25e-07!5;CL:0000097!2.25e-07!5;CL:0000831!2.25e-07!5;CL:0002028!2.25e-07!5|ontology_enrichment_celltype_v019=CL:0000097;2.11e-14;5!CL:0002567;1.61e-08;3!CL:0000163;9.23e-08;9|ontology_enrichment_celltype_v019_2=CL:0000097,2.20e-14,5;CL:0002028,2.20e-14,5;CL:0002567,1.63e-08,3;CL:0000163,9.43e-08,9|ontology_enrichment_development_v019=UBERON:0006601;4.12e-16;82!UBERON:0006241;3.02e-08;3!UBERON:0003057;3.02e-08;3!UBERON:0006215;7.24e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.33e-43!57;UBERON:0005068!2.33e-43!57;UBERON:0006241!2.33e-43!57;UBERON:0007135!2.33e-43!57;UBERON:0001017!7.51e-40!82;UBERON:0005743!1.48e-38!86;UBERON:0002616!2.33e-38!59;UBERON:0007023!8.72e-38!115;UBERON:0000955!2.76e-37!69;UBERON:0006238!2.76e-37!69;UBERON:0000073!6.39e-37!94;UBERON:0001016!6.39e-37!94;UBERON:0002780!9.31e-34!41;UBERON:0001890!9.31e-34!41;UBERON:0006240!9.31e-34!41;UBERON:0003080!1.34e-32!42;UBERON:0002020!3.73e-31!34;UBERON:0003528!3.73e-31!34;UBERON:0001893!4.54e-31!34;UBERON:0003075!2.52e-30!86;UBERON:0007284!2.52e-30!86;UBERON:0002346!3.62e-30!90;UBERON:0002791!4.46e-30!33;UBERON:0001869!9.99e-29!32;UBERON:0003056!6.84e-23!61;UBERON:0002619!6.82e-22!22;UBERON:0000956!1.82e-21!25;UBERON:0000203!1.82e-21!25;UBERON:0000153!2.28e-21!129;UBERON:0007811!2.28e-21!129;UBERON:0000033!3.31e-20!123;UBERON:0001950!1.02e-19!20;UBERON:0000924!4.01e-19!173;UBERON:0006601!4.01e-19!173;UBERON:0004121!7.56e-19!169;UBERON:0003076!1.30e-11!15;UBERON:0003057!1.30e-11!15;UBERON:0002308!3.03e-11!9;UBERON:0000125!3.03e-11!9;UBERON:0002420!4.86e-11!9;UBERON:0007245!4.86e-11!9;UBERON:0010009!4.86e-11!9;UBERON:0010011!4.86e-11!9;UBERON:0000454!4.86e-11!9;UBERON:0004732!8.61e-10!13;UBERON:0009663!5.02e-09!7;UBERON:0004733!1.02e-08!12;UBERON:0002028!1.02e-08!12;UBERON:0007277!1.02e-08!12;UBERON:0000922!2.00e-08!612;UBERON:0000062!3.06e-08!511;UBERON:0002298!7.04e-08!8;UBERON:0002050!1.48e-07!605;UBERON:0005423!1.48e-07!605;UBERON:0000200!1.66e-07!6;UBERON:0001871!2.05e-07!7;UBERON:0000923!3.11e-07!604;UBERON:0005291!3.11e-07!604;UBERON:0006598!3.11e-07!604;UBERON:0002532!3.11e-07!604;UBERON:0000468!4.79e-07!659;UBERON:0000349!7.88e-07!5|ontology_enrichment_uberon_v019=UBERON:0001893;1.74e-49;34!UBERON:0003528;2.46e-48;34!UBERON:0002020;2.46e-48;34!UBERON:0002791;1.99e-47;32!UBERON:0001869;4.68e-47;32!UBERON:0002780;4.99e-47;41!UBERON:0001890;4.99e-47;41!UBERON:0000073;3.94e-45;53!UBERON:0002616;3.94e-45;53!UBERON:0002619;2.40e-43;22!UBERON:0001950;1.48e-38;20!UBERON:0000956;1.24e-37;25!UBERON:0000203;1.24e-37;25!UBERON:0001017;4.12e-33;75!UBERON:0000955;5.93e-31;68!UBERON:0001016;3.39e-27;83!UBERON:0000125;6.13e-23;9!UBERON:0002308;6.13e-23;9!UBERON:0002420;1.81e-22;9!UBERON:0007245;1.81e-22;9!UBERON:0010009;1.81e-22;9!UBERON:0010011;1.81e-22;9!UBERON:0000454;1.81e-22;9!UBERON:0004732;1.88e-18;13!UBERON:0009663;4.91e-18;7!UBERON:0004733;3.95e-16;12!UBERON:0002028;3.95e-16;12!UBERON:0002298;5.27e-16;6!UBERON:0007023;5.73e-14;114!UBERON:0000349;3.34e-13;5!UBERON:0001871;7.93e-13;6!UBERON:0002021;1.61e-12;5!UBERON:0001872;4.11e-12;5!UBERON:0000369;7.79e-11;4!UBERON:0002435;7.79e-11;4!UBERON:0000204;7.79e-11;4!UBERON:0000200;9.32e-11;6!UBERON:0002784;1.37e-10;4!UBERON:0011216;3.80e-10;132!UBERON:0002680;8.40e-10;9!UBERON:0001895;8.40e-10;9!UBERON:0001894;4.60e-09;7!UBERON:0000988;6.12e-09;3!UBERON:0001896;9.28e-09;3!UBERON:0005290;9.28e-09;3!UBERON:0005383;1.47e-08;3!UBERON:0005382;1.47e-08;3!UBERON:0002240;3.02e-08;3!UBERON:0005174;3.02e-08;3!UBERON:0001137;3.02e-08;3!UBERON:0010314;3.55e-07;132!UBERON:0005162;8.55e-07;2!UBERON:0000122;8.55e-07;2!UBERON:0001897;8.91e-07;2!UBERON:0010225;8.91e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.02e-88,56;UBERON:0005068,2.02e-88,56;UBERON:0006241,2.02e-88,56;UBERON:0007135,2.02e-88,56;UBERON:0000073,1.69e-81,53;UBERON:0002616,1.69e-81,53;UBERON:0001017,1.72e-73,81;UBERON:0000955,1.77e-72,68;UBERON:0006238,1.77e-72,68;UBERON:0001016,6.52e-68,89;UBERON:0002780,7.02e-66,41;UBERON:0001890,7.02e-66,41;UBERON:0003080,7.02e-66,41;UBERON:0006240,7.02e-66,41;UBERON:0003075,2.68e-62,82;UBERON:0007284,2.68e-62,82;UBERON:0002346,8.51e-59,86;UBERON:0003528,1.62e-58,34;UBERON:0002020,1.62e-58,34;UBERON:0001893,2.44e-58,34;UBERON:0002791,1.27e-53,32;UBERON:0001869,2.95e-53,32;UBERON:0010371,1.76e-48,104;UBERON:0003056,6.19e-47,61;UBERON:0007023,1.12e-43,114;UBERON:0002619,3.09e-43,22;UBERON:0001950,1.89e-38,20;UBERON:0000956,1.55e-37,25;UBERON:0000203,1.55e-37,25;UBERON:001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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6446 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |||
|TSSclassifier=S | |||
|UniProt=O00141,Q7Z3I4 | |||
|association_with_transcript=24bp_to_ENST00000367858,NM_001143676,uc003qeo.3,uc003qep.2_5end | |||
|coexpression_cluster_id=C701 | |||
|description=CAGE_peak_7_at_SGK1_5end | |||
|id=chr6:134639140..134639171,- | |||
|ontology_enrichment_celltype=CL:0002274!2.25e-07!5;CL:0000457!2.25e-07!5;CL:0002191!2.25e-07!5;CL:0000097!2.25e-07!5;CL:0000831!2.25e-07!5;CL:0002028!2.25e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.11e-14;5!CL:0002567;1.61e-08;3!CL:0000163;9.23e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.20e-14,5;CL:0002028,2.20e-14,5;CL:0002567,1.63e-08,3;CL:0000163,9.43e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.12e-16;82!UBERON:0006241;3.02e-08;3!UBERON:0003057;3.02e-08;3!UBERON:0006215;7.24e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p7@SGK1 | |||
}} |
Revision as of 18:06, 13 September 2013
Short description: | p7@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SGK1_5end |
Coexpression cluster: | C701_Mast_thalamus_globus_middle_substantia_corpus_medial |
Association with transcript: | 24bp_to_ENST00000367858, NM_001143676, uc003qeo.3, uc003qep.2_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | O00141Q7Z3I4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.20e-14 | 5 |
basophil mast progenitor cell | 2.20e-14 | 5 |
light melanocyte | 1.63e-08 | 3 |
endocrine cell | 9.43e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.