FFCP PHASE1:Hg19::chr6:126221034..126221056,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=135112|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21081|TSSclassifier=N|UniProt=Q5JVL1|association_with_transcript=0bp_to_ENST00000433571_5end|coexpression_cluster_id=C1155|description=CAGE_peak_13_at_NCOA7_5end|id=chr6:126221034..126221056,+|ontology_enrichment_celltype=CL:0000181!3.19e-19!12;CL:0000417!3.19e-19!12;CL:0000668!3.19e-19!12;CL:0000414!3.19e-19!12;CL:0000412!3.19e-19!12;CL:0000182!3.19e-19!12;CL:0000223!5.01e-08!59;CL:0000066!3.16e-07!254|ontology_enrichment_celltype_v019=CL:0000182;5.47e-25;12!CL:0000313;1.22e-07;1!CL:0002563;1.31e-07;4|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-25,12;CL:0000223,2.66e-11,58;CL:0000066,1.63e-08,253;CL:0000313,1.22e-07,1;CL:0002563,1.31e-07,4|ontology_enrichment_development_v019=UBERON:0004161;3.81e-20;11!UBERON:0009497;5.69e-17;13!UBERON:0003104;2.00e-15;31!UBERON:0008947;2.40e-12;29!UBERON:0001041;3.19e-12;30!CL:0000223;1.13e-07;58|ontology_enrichment_disease=DOID:305!5.93e-14!106;DOID:0050687!8.02e-10!143|ontology_enrichment_disease_v019=DOID:2152;1.22e-07;1|ontology_enrichment_disease_v019_2=DOID:305,2.17e-13,106;DOID:0050687,4.79e-09,143;DOID:2152,1.22e-07,1|ontology_enrichment_uberon=UBERON:0004921!8.55e-32!129;UBERON:0004185!8.55e-32!129;UBERON:0001737!1.61e-31!9;UBERON:0001007!5.83e-25!155;UBERON:0001555!5.83e-25!155;UBERON:0007026!5.83e-25!155;UBERON:0000077!1.04e-22!130;UBERON:0001041!2.73e-22!98;UBERON:0004119!3.76e-22!169;UBERON:0000925!3.76e-22!169;UBERON:0006595!3.76e-22!169;UBERON:0009856!1.17e-21!26;UBERON:0009854!4.06e-21!23;UBERON:0007499!2.52e-19!25;UBERON:0008835!1.03e-18!22;UBERON:0003894!1.03e-18!22;UBERON:0002107!2.12e-18!19;UBERON:0006925!2.12e-18!19;UBERON:0008836!2.12e-18!19;UBERON:0001557!3.22e-17!19;UBERON:0009497!3.55e-16!25;UBERON:0000015!3.55e-16!25;UBERON:0002423!3.55e-16!25;UBERON:0006235!3.55e-16!25;UBERON:0004161!3.55e-16!25;UBERON:0005057!2.04e-15!26;UBERON:0003929!3.04e-14!54;UBERON:0003104!3.13e-14!238;UBERON:0009142!3.13e-14!238;UBERON:0005911!2.03e-13!82;UBERON:0008947!2.60e-13!38;UBERON:0003258!2.60e-13!38;UBERON:0000481!6.07e-12!347;UBERON:0005172!7.60e-12!55;UBERON:0005173!7.60e-12!55;UBERON:0002365!1.82e-10!31;UBERON:0002330!1.82e-10!31;UBERON:0002417!2.45e-10!61;UBERON:0000916!2.45e-10!61;UBERON:0001048!3.12e-10!168;UBERON:0000065!3.29e-10!53;UBERON:0002368!4.88e-09!35;UBERON:0005177!5.69e-09!107;UBERON:0000072!7.42e-09!46;UBERON:0002530!4.97e-08!59;UBERON:0005409!5.25e-08!35;UBERON:0000949!5.58e-08!45;UBERON:0009569!2.65e-07!113;UBERON:0000160!4.69e-07!27;UBERON:0000062!5.38e-07!511;UBERON:0001004!9.91e-07!72|ontology_enrichment_uberon_v019=UBERON:0002107;1.06e-25;19!UBERON:0006925;1.06e-25;19!UBERON:0001737;7.26e-24;9!UBERON:0001557;7.26e-24;9!UBERON:0002423;3.46e-19;25!UBERON:0002365;9.05e-15;31!UBERON:0002330;9.05e-15;31!UBERON:0002368;6.13e-13;33!UBERON:0000949;2.61e-09;43!UBERON:0005172;1.08e-08;52!UBERON:0005173;1.08e-08;52!UBERON:0000072;1.81e-08;37!UBERON:0000065;3.15e-08;44!UBERON:0004911;1.22e-07;1!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4!UBERON:0002417;3.40e-07;58!UBERON:0000916;3.40e-07;58!UBERON:0002530;7.04e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.70e-26,19;UBERON:0006925,9.70e-26,19;UBERON:0008836,9.70e-26,19;UBERON:0001737,4.45e-24,9;UBERON:0007499,1.22e-23,25;UBERON:0004921,2.30e-23,118;UBERON:0009856,1.16e-22,26;UBERON:0008835,4.93e-22,22;UBERON:0003894,4.93e-22,22;UBERON:0009854,5.18e-21,23;UBERON:0001041,1.59e-19,87;UBERON:0009497,3.25e-19,25;UBERON:0000015,3.25e-19,25;UBERON:0002423,3.25e-19,25;UBERON:0006235,3.25e-19,25;UBERON:0004161,3.25e-19,25;UBERON:0001007,3.41e-18,145;UBERON:0001555,3.41e-18,145;UBERON:0007026,3.41e-18,145;UBERON:0003929,1.44e-17,54;UBERON:0005911,1.37e-16,82;UBERON:0004119,4.55e-16,160;UBERON:0000925,4.55e-16,160;UBERON:0006595,4.55e-16,160;UBERON:0002365,3.26e-15,31;UBERON:0002330,3.26e-15,31;UBERON:0002368,2.63e-13,35;UBERON:0005172,2.81e-12,54;UBERON:0005173,2.81e-12,54;UBERON:0008947,1.26e-11,38;UBERON:0003258,1.26e-11,38;UBERON:0011216,3.47e-11,223;UBERON:0001557,3.74e-11,19;UBERON:0002530,4.29e-11,59;UBERON:0002417,7.56e-11,60;UBERON:0000916,7.56e-11,60;UBERON:0001048,3.44e-10,160;UBERON:0000949,5.03e-10,45;UBERON:0005177,1.82e-09,101;UBERON:0009569,2.86e-08,112;UBERON:0000065,9.12e-08,54;UBERON:0004911,1.22e-07,1;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4;UBERON:0000072,3.03e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=135112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21081 | |||
|TSSclassifier=N | |||
|UniProt=Q5JVL1 | |||
|association_with_transcript=0bp_to_ENST00000433571_5end | |||
|coexpression_cluster_id=C1155 | |||
|description=CAGE_peak_13_at_NCOA7_5end | |||
|id=chr6:126221034..126221056,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.19e-19!12;CL:0000417!3.19e-19!12;CL:0000668!3.19e-19!12;CL:0000414!3.19e-19!12;CL:0000412!3.19e-19!12;CL:0000182!3.19e-19!12;CL:0000223!5.01e-08!59;CL:0000066!3.16e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.47e-25;12!CL:0000313;1.22e-07;1!CL:0002563;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-25,12;CL:0000223,2.66e-11,58;CL:0000066,1.63e-08,253;CL:0000313,1.22e-07,1;CL:0002563,1.31e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.81e-20;11!UBERON:0009497;5.69e-17;13!UBERON:0003104;2.00e-15;31!UBERON:0008947;2.40e-12;29!UBERON:0001041;3.19e-12;30!CL:0000223;1.13e-07;58 | |||
|ontology_enrichment_disease=DOID:305!5.93e-14!106;DOID:0050687!8.02e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.22e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.17e-13,106;DOID:0050687,4.79e-09,143;DOID:2152,1.22e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!8.55e-32!129;UBERON:0004185!8.55e-32!129;UBERON:0001737!1.61e-31!9;UBERON:0001007!5.83e-25!155;UBERON:0001555!5.83e-25!155;UBERON:0007026!5.83e-25!155;UBERON:0000077!1.04e-22!130;UBERON:0001041!2.73e-22!98;UBERON:0004119!3.76e-22!169;UBERON:0000925!3.76e-22!169;UBERON:0006595!3.76e-22!169;UBERON:0009856!1.17e-21!26;UBERON:0009854!4.06e-21!23;UBERON:0007499!2.52e-19!25;UBERON:0008835!1.03e-18!22;UBERON:0003894!1.03e-18!22;UBERON:0002107!2.12e-18!19;UBERON:0006925!2.12e-18!19;UBERON:0008836!2.12e-18!19;UBERON:0001557!3.22e-17!19;UBERON:0009497!3.55e-16!25;UBERON:0000015!3.55e-16!25;UBERON:0002423!3.55e-16!25;UBERON:0006235!3.55e-16!25;UBERON:0004161!3.55e-16!25;UBERON:0005057!2.04e-15!26;UBERON:0003929!3.04e-14!54;UBERON:0003104!3.13e-14!238;UBERON:0009142!3.13e-14!238;UBERON:0005911!2.03e-13!82;UBERON:0008947!2.60e-13!38;UBERON:0003258!2.60e-13!38;UBERON:0000481!6.07e-12!347;UBERON:0005172!7.60e-12!55;UBERON:0005173!7.60e-12!55;UBERON:0002365!1.82e-10!31;UBERON:0002330!1.82e-10!31;UBERON:0002417!2.45e-10!61;UBERON:0000916!2.45e-10!61;UBERON:0001048!3.12e-10!168;UBERON:0000065!3.29e-10!53;UBERON:0002368!4.88e-09!35;UBERON:0005177!5.69e-09!107;UBERON:0000072!7.42e-09!46;UBERON:0002530!4.97e-08!59;UBERON:0005409!5.25e-08!35;UBERON:0000949!5.58e-08!45;UBERON:0009569!2.65e-07!113;UBERON:0000160!4.69e-07!27;UBERON:0000062!5.38e-07!511;UBERON:0001004!9.91e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.06e-25;19!UBERON:0006925;1.06e-25;19!UBERON:0001737;7.26e-24;9!UBERON:0001557;7.26e-24;9!UBERON:0002423;3.46e-19;25!UBERON:0002365;9.05e-15;31!UBERON:0002330;9.05e-15;31!UBERON:0002368;6.13e-13;33!UBERON:0000949;2.61e-09;43!UBERON:0005172;1.08e-08;52!UBERON:0005173;1.08e-08;52!UBERON:0000072;1.81e-08;37!UBERON:0000065;3.15e-08;44!UBERON:0004911;1.22e-07;1!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4!UBERON:0002417;3.40e-07;58!UBERON:0000916;3.40e-07;58!UBERON:0002530;7.04e-07;57 | |||
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|short_description=p13@NCOA7 | |||
}} |
Revision as of 17:49, 13 September 2013
Short description: | p13@NCOA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_NCOA7_5end |
Coexpression cluster: | C1155_Hepatocyte_Intestinal_Prostate_liver_colon_small_Retinal |
Association with transcript: | 0bp_to_ENST00000433571_5end |
EntrezGene: | NCOA7 |
HGNC: | 21081 |
UniProt: | Q5JVL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.10e-25 | 12 |
endodermal cell | 2.66e-11 | 58 |
epithelial cell | 1.63e-08 | 253 |
serous secreting cell | 1.22e-07 | 1 |
intestinal epithelial cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.17e-13 | 106 |
cell type cancer | 4.79e-09 | 143 |
ovary epithelial cancer | 1.22e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.