FFCP PHASE1:Hg19::chr6:125283436..125283477,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=154214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21487|TSSclassifier=W|UniProt=F2Z2M4|association_with_transcript=-213bp_to_ENST00000521654_5end|coexpression_cluster_id=C383|description=CAGE_peak_5_at_RNF217_5end|id=chr6:125283436..125283477,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;2.02e-08;19|ontology_enrichment_celltype_v019_2=CL:0000349,6.02e-08,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.15e-12!659;UBERON:0000475!1.34e-08!365;UBERON:0000467!1.38e-08!625;UBERON:0000480!2.22e-08!626;UBERON:0000033!1.76e-07!123;UBERON:0000924!2.80e-07!173;UBERON:0006601!2.80e-07!173;UBERON:0004121!3.75e-07!169;UBERON:0000922!4.54e-07!612;UBERON:0000153!6.60e-07!129;UBERON:0007811!6.60e-07!129;UBERON:0004923!7.40e-07!57|ontology_enrichment_uberon_v019=UBERON:0005631;6.45e-10;10!UBERON:0000158;6.45e-10;10!UBERON:0000478;4.29e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.71e-10,66;UBERON:0005631,6.85e-10,14;UBERON:0000158,6.85e-10,14;UBERON:0006876,3.06e-07,11;UBERON:0003688,7.92e-07,6;UBERON:0002358,7.92e-07,6;UBERON:0003684,7.92e-07,6;UBERON:0001178,7.92e-07,6|phase1_expression=1.63510541343501,2.14100523890983,2.39622486963151,2.00146596706261,1.78784437770915,1.74467704820074,0,0,0.783556884599516,0.737201809504527,0,3.49506195408276,2.37390280405608,0.495065411840187,0.331397375727916,0,1.20538905604795,0,0,0.861847406537515,0.204000691244253,0.313454721478088,0,1.09499540058307,1.00434111675842,0.152826811495903,0,0.0787107813136792,0,0,1.08371286321253,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0.401088894940283,0.868043482863407,0.671746422719773,0.32389366601898,0.77272670290256,0.145398238779565,0.377875943688809,1.21292030593908,0.464858073811369,0,0.309706370895104,0.575384784644301,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0.752969358170419,0.545812300115692,0.449446968890169,0,0.320929027076094,0.639337125799041,0.989553900560148,0.199463657621632,0,0,0,0,0.75374599577023,1.5644487552606,0,0,0,0.316462387440884,0,0.425208599930087,0.838634582033504,0.22465726229299,0.450530678524519,0.32145117339416,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.639312809217652,0,1.50401373190767,0.724232594804119,0.795285947051099,1.45990461090791,1.70162670895322,1.77383517970051,2.63504357079378,0.654895377488563,0.364295288292542,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,1.69592382577203,0,1.37559020970034,0.626984899610432,0.258416759169329,0.71153252537342,0.66944122552934,1.61131726843659,1.52054421143703,0.488124115096339,0,0,0.17859945656816,0.898117490504679,0.563057402416611,1.53316637465883,0,0.916008719652036,0,0,2.18047026071267,1.49091585508596,0.633152558322899,1.58891016975863,1.14734648299525,1.06400514659507,1.12135520028461,0,0.74000264525148,0.311211035399766,1.0776853765575,0.817309515567294,1.21085942115945,1.72852777344,0.70296429550139,1.24864030732128,0,0.747243402759005,0.704606991862589,0.647491777472526,0.140450806702248,0.816616685019573,0.982674538494144,1.13658359293342,5.94001428641027,1.48360157567134,0,1.43723628363248,0.505008341862199,0.625592599359821,0.831192346452549,1.75591048352335,0.612975591598039,1.65261864797256,0.794025282120147,1.07633781413317,0.85422955527427,0.635795703478686,0.900273288253207,0.515262646192195,1.54584324027377,0.558350568994769,0.675105328965065,0.0974370051611986,0.757301322732344,0.644349290496095,0.80823028409406,2.13005755509969,0.403008392910561,0.847802961552438,1.54608682530637,1.90922284413584,4.01526433544605,0.853815942907168,0.927708378250397,0.348581828608555,0.310983165046111,0.756962552626885,0.36497735907583,0,0.643240938192885,1.38134921352481,1.39310378409594,0,0.118306800039844,0.674338760312407,0.723033089650446,0.330881918197182,0.871517776369625,0.237270619111097,0.674156540800822,0.196221465125346,0,0.738155454624648,0,0,2.94017422771084,1.26755034821831,0,1.18157981336281,0,0,1.71567810298526,1.86575485194663,1.1240175325762,1.00528972411631,0.462942225792648,0,0,0,1.507095264676,1.99594780200897,0.144366447761074,0,1.14152491340759,0,0,0.246217006087397,0,0.445893486866185,1.87467667973554,1.84780341018745,0.850650583454319,0.895585227028483,1.16253575405585,1.15014803749563,0,0,0,0,0.12624243342638,0.571481048629521,0.381988425558278,1.17217447210047,0,0.719792448923265,0.600686115687835,1.14330573052231,0.672786506072164,2.1798003441664,1.39342743059805,1.16344544182,0,2.535908257668,1.32969058292435,0,0.514414748524284,0,0,1.14382394926518,1.08524321078289,0,0,2.48774364119782,0.791951872933429,1.50719688529793,0.87153345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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=154214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |||
|TSSclassifier=W | |||
|UniProt=F2Z2M4 | |||
|association_with_transcript=-213bp_to_ENST00000521654_5end | |||
|coexpression_cluster_id=C383 | |||
|description=CAGE_peak_5_at_RNF217_5end | |||
|id=chr6:125283436..125283477,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.02e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.02e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.15e-12!659;UBERON:0000475!1.34e-08!365;UBERON:0000467!1.38e-08!625;UBERON:0000480!2.22e-08!626;UBERON:0000033!1.76e-07!123;UBERON:0000924!2.80e-07!173;UBERON:0006601!2.80e-07!173;UBERON:0004121!3.75e-07!169;UBERON:0000922!4.54e-07!612;UBERON:0000153!6.60e-07!129;UBERON:0007811!6.60e-07!129;UBERON:0004923!7.40e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.45e-10;10!UBERON:0000158;6.45e-10;10!UBERON:0000478;4.29e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.71e-10,66;UBERON:0005631,6.85e-10,14;UBERON:0000158,6.85e-10,14;UBERON:0006876,3.06e-07,11;UBERON:0003688,7.92e-07,6;UBERON:0002358,7.92e-07,6;UBERON:0003684,7.92e-07,6;UBERON:0001178,7.92e-07,6 | |||
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| |||
|short_description=p5@RNF217 | |||
}} |
Revision as of 17:47, 13 September 2013
Short description: | p5@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RNF217_5end |
Coexpression cluster: | C383_oral_liposarcoma_small_Small_skeletal_amniotic_Astrocyte |
Association with transcript: | -213bp_to_ENST00000521654_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | F2Z2M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.02e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 3.71e-10 | 66 |
extraembryonic membrane | 6.85e-10 | 14 |
membranous layer | 6.85e-10 | 14 |
vasculature of organ | 3.06e-07 | 11 |
omentum | 7.92e-07 | 6 |
peritoneum | 7.92e-07 | 6 |
abdominal cavity | 7.92e-07 | 6 |
visceral peritoneum | 7.92e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.