FFCP PHASE1:Mm9::chr19:44831420..44831432,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18504|HGNC=|UniProt=G3UYQ1|association_with_transcript=-443bp_to_ENSMUST00000172880_5end|description=CAGE_peak_3_at_Pax2_5end|id=chr19:44831420..44831432,+|ontology_enrichment_celltype=CL:0002612!9.47e-07!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!2.97e-31!21;UBERON:0002113!8.00e-23!14;UBERON:0003918!8.00e-23!14;UBERON:0005095!8.00e-23!14;UBERON:0007687!8.00e-23!14;UBERON:0001008!2.17e-21!17;UBERON:0006554!1.58e-19!16;UBERON:0003103!1.50e-12!43;UBERON:0002240!1.92e-11!6;UBERON:0005174!1.92e-11!6;UBERON:0001137!1.92e-11!6;UBERON:0001948!9.49e-10!5;UBERON:0002315!9.49e-10!5;UBERON:0003076!5.18e-09!12;UBERON:0003057!5.18e-09!12;UBERON:0004175!6.31e-08!9;UBERON:0002257!9.47e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.42e-30,14;UBERON:0003918,1.42e-30,14;UBERON:0011143,1.42e-30,14;UBERON:0005095,1.42e-30,14;UBERON:0007687,1.42e-30,14;UBERON:0001008,2.50e-28,19;UBERON:0000489,1.77e-25,21;UBERON:0006554,1.16e-23,18;UBERON:0004175,1.09e-12,9;UBERON:0003103,4.87e-12,43;UBERON:0005172,2.89e-08,49;UBERON:0005173,2.89e-08,49;UBERON:0002417,2.89e-08,49;UBERON:0000916,2.89e-08,49;UBERON:0003104,3.00e-08,61;UBERON:0009142,3.00e-08,61;UBERON:0000996,3.50e-08,1;UBERON:0000998,4.80e-08,1;UBERON:0007194,4.80e-08,1;UBERON:0006868,4.80e-08,1;UBERON:0000080,6.61e-08,4;UBERON:0005904,6.61e-08,4;UBERON:0006947,6.61e-08,4;UBERON:0002120,6.61e-08,4;UBERON:0004054,6.61e-08,4;UBERON:0004875,6.61e-08,4;UBERON:0004876,6.61e-08,4;UBERON:0005721,6.61e-08,4;UBERON:0005754,6.61e-08,4;UBERON:0007297,6.61e-08,4;UBERON:0000993,8.96e-08,1;UBERON:0000474,2.18e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,1.1665793944457,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.711858403995515,1.3047961207771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,5.30717792710717,0,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.342745537829186,1.1270773567308,1.62921062276251,0.775809948670503,1.26244475802573,0.885311519739602,2.21415221969403,2.19798218977925,2.96153193412321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,2.74727436400898,1.92931541171159,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p3@Pax2}} | ||
|EntrezGene=18504 | |||
|HGNC= | |||
|UniProt=G3UYQ1 | |||
|association_with_transcript=-443bp_to_ENSMUST00000172880_5end | |||
|description=CAGE_peak_3_at_Pax2_5end | |||
|id=chr19:44831420..44831432,+ | |||
|ontology_enrichment_celltype=CL:0002612!9.47e-07!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.97e-31!21;UBERON:0002113!8.00e-23!14;UBERON:0003918!8.00e-23!14;UBERON:0005095!8.00e-23!14;UBERON:0007687!8.00e-23!14;UBERON:0001008!2.17e-21!17;UBERON:0006554!1.58e-19!16;UBERON:0003103!1.50e-12!43;UBERON:0002240!1.92e-11!6;UBERON:0005174!1.92e-11!6;UBERON:0001137!1.92e-11!6;UBERON:0001948!9.49e-10!5;UBERON:0002315!9.49e-10!5;UBERON:0003076!5.18e-09!12;UBERON:0003057!5.18e-09!12;UBERON:0004175!6.31e-08!9;UBERON:0002257!9.47e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.42e-30,14;UBERON:0003918,1.42e-30,14;UBERON:0011143,1.42e-30,14;UBERON:0005095,1.42e-30,14;UBERON:0007687,1.42e-30,14;UBERON:0001008,2.50e-28,19;UBERON:0000489,1.77e-25,21;UBERON:0006554,1.16e-23,18;UBERON:0004175,1.09e-12,9;UBERON:0003103,4.87e-12,43;UBERON:0005172,2.89e-08,49;UBERON:0005173,2.89e-08,49;UBERON:0002417,2.89e-08,49;UBERON:0000916,2.89e-08,49;UBERON:0003104,3.00e-08,61;UBERON:0009142,3.00e-08,61;UBERON:0000996,3.50e-08,1;UBERON:0000998,4.80e-08,1;UBERON:0007194,4.80e-08,1;UBERON:0006868,4.80e-08,1;UBERON:0000080,6.61e-08,4;UBERON:0005904,6.61e-08,4;UBERON:0006947,6.61e-08,4;UBERON:0002120,6.61e-08,4;UBERON:0004054,6.61e-08,4;UBERON:0004875,6.61e-08,4;UBERON:0004876,6.61e-08,4;UBERON:0005721,6.61e-08,4;UBERON:0005754,6.61e-08,4;UBERON:0007297,6.61e-08,4;UBERON:0000993,8.96e-08,1;UBERON:0000474,2.18e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,1.1665793944457,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.711858403995515,1.3047961207771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,5.30717792710717,0,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.342745537829186,1.1270773567308,1.62921062276251,0.775809948670503,1.26244475802573,0.885311519739602,2.21415221969403,2.19798218977925,2.96153193412321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,2.74727436400898,1.92931541171159,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Pax2 | |||
}} |
Revision as of 17:46, 13 September 2013
Short description: | p3@Pax2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pax2_5end |
Coexpression cluster: | NA |
Association with transcript: | -443bp_to_ENSMUST00000172880_5end |
EntrezGene: | Pax2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.42e-30 | 14 |
kidney mesenchyme | 1.42e-30 | 14 |
upper urinary tract | 1.42e-30 | 14 |
kidney rudiment | 1.42e-30 | 14 |
kidney field | 1.42e-30 | 14 |
renal system | 2.50e-28 | 19 |
cavitated compound organ | 1.77e-25 | 21 |
urinary system structure | 1.16e-23 | 18 |
internal genitalia | 1.09e-12 | 9 |
compound organ | 4.87e-12 | 43 |
abdomen element | 2.89e-08 | 49 |
abdominal segment element | 2.89e-08 | 49 |
abdominal segment of trunk | 2.89e-08 | 49 |
abdomen | 2.89e-08 | 49 |
mesenchyme | 3.00e-08 | 61 |
entire embryonic mesenchyme | 3.00e-08 | 61 |
vagina | 3.50e-08 | 1 |
seminal vesicle | 4.80e-08 | 1 |
vesicular gland | 4.80e-08 | 1 |
seminal fluid secreting gland | 4.80e-08 | 1 |
mesonephros | 6.61e-08 | 4 |
duct of male reproductive system | 6.61e-08 | 4 |
male genital duct | 6.61e-08 | 4 |
pronephros | 6.61e-08 | 4 |
internal male genitalia | 6.61e-08 | 4 |
nephrogenic cord | 6.61e-08 | 4 |
urogenital ridge | 6.61e-08 | 4 |
pronephric mesoderm | 6.61e-08 | 4 |
rostral part of nephrogenic cord | 6.61e-08 | 4 |
presumptive pronephric mesoderm | 6.61e-08 | 4 |
oviduct | 8.96e-08 | 1 |
female reproductive system | 2.18e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.