FFCP PHASE1:Mm9::chr19:41068679..41068690,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17060|HGNC=|UniProt=D3YWR2|association_with_transcript=-41bp_to_ENSMUST00000117695_5end|description=CAGE_peak_3_at_Blnk_5end|id=chr19:41068679..41068690,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.64e-10!59;UBERON:0007023!8.75e-09!51;UBERON:0004119!1.33e-08!130;UBERON:0000925!1.33e-08!130;UBERON:0006595!1.33e-08!130;UBERON:0001007!2.17e-08!128;UBERON:0001555!2.17e-08!128;UBERON:0007026!2.17e-08!128;UBERON:0004923!4.53e-08!24;UBERON:0000160!6.75e-08!43;UBERON:0004921!1.24e-07!126;UBERON:0004185!1.24e-07!126;UBERON:0000344!1.54e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.53e-12,47;UBERON:0004923,2.08e-10,24;UBERON:0007023,3.63e-10,51;UBERON:0000160,3.77e-10,31;UBERON:0000344,8.42e-09,15;UBERON:0004119,8.77e-08,118;UBERON:0000925,8.77e-08,118;UBERON:0006595,8.77e-08,118;UBERON:0001007,1.14e-07,116;UBERON:0001555,1.14e-07,116;UBERON:0007026,1.14e-07,116;UBERON:0001242,3.58e-07,13;UBERON:0001262,3.58e-07,13;UBERON:0004786,3.58e-07,13;UBERON:0004921,9.16e-07,114|phase1_expression=0.160148847104794,2.44282785347553,2.72999543633722,0.90739263392049,2.50447864973174,3.18970616632591,4.43864017131499,0,0,0,0,0,0,0,3.66420737997229,4.45445588257617,0.699561878128147,17.192688012024,18.0991052359575,17.8243653755173,0.935476191661768,0,0.261199789138935,4.7997726838022,5.27641346454491,2.29692785646008,3.87685796543167,3.66301095566011,1.33016393619462,0.504060259519861,4.8780712344167,0,0,0,5.19932915552294,5.48574329683025,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,15.939347575485,0.725362142011344,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,4.49949858640699,5.93319817540185,6.3943210345149,0.599200221036809,1.15265491596466,0,0,0,0,0,0,0,0,0,0.383062014255563,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,3.47837386442013,0,5.439770669662,0,0,0.448026887097336,1.82577746171277,0,0,0,0.422530259330042,0,0,0,2.38140145112336,1.52015919285059,2.52762222507392,1.82694207550496,30.0367945030719,0.742210695324124,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0.578397427679647,0.884610551949874,0.485300549842228,3.5334642953663,1.93950101254089,7.45567044872489,0,0,2.29911349687732,0.11981512450592,0,0,0.149790639404823,0,0.125654352112864,1.04294592115366,0.511430914660661,0.41557608911912,0,0.611036183101898,4.10543003013307,3.53811861807145,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.281105173679186,0.517406741478031,0,0,0,0,0.278047249225598,1.39300866608867,0.823128545631774,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0.878200461164203,0.671032093801859,0.420579897128254,0.205809224758569,1.65209391491899,1.58670339998127,0,0.464473343720877,1.67527699718721,1.81515172161008,0.667134131534611,1.14135375667535,1.42358718463353,0.494096864172033,1.00534083520108,0.994782360205754,1.36474860983384,1.79763881730844,1.94524244887225,1.59313018603494,0.948339504765408,0.228497025219458,0,1.22190796707189,1.74557238450863,0.841629838683823,2.27651533647326,2.80459281161244,3.767969468193,2.34454611451421,0.592905254174298,0,0,0.224862112384854,0,0.241177159752417,0,0.863088412352432,0.972811360650212,0.274561413188081,1.43768206527355,0.744281895337007,0.624075346229121,0.505157755894224,0.179397413521912,0,2.77129785249907,0,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0.637819074629948,1.3109065177259,1.03610989119537,1.01254341007058,10.5553898757491,4.89515115436839,0,1.93155722413313,0.160550589987792,0.234423373184406,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,2.2710413633323,0.178065603667255,0.651547837414304,4.28922319728592,1.32745138339963,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,1.26414703174326,0,0,0,0,0,0.214337035031592,0.532020700926821,1.07021290561242,0,0,0.23467170806371,1.48282449604674,29.3302769413099,6.26567761177624,1.61464426695906,1.5078231232039,1.3130957840345,1.64140899745061,2.62332752966866,0.556275906031529,9.91051108627546,0,1.11116716421827,2.82552685507037,5.33107488111998,5.0331198105435,0.339956859987711,0.979660166265606,1.52019971184866,3.81868247206045,0,0,0.324016022465404,1.04544148007234,1.09181281873089,0.539457385539283,0.991841468704031,1.04702376793612,5.05498395837992,4.34937519160848,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0.288030006257865,1.26404448251271,0,0.308132871494482,2.33857481360031,0.895133478337407,0.79472541912506,0.360586348559907,0.886137163047463,0.504832249740738,0.609654453239999,0.403304740547362,1.16949456887703,0.962118416403295,0.701261413089414,5.8949899739955,0,0,0,1.9318959403219,6.19352168988901,6.41030684935428,6.64541975145104,27.0848936179096,0.564751842617067,1.38097570952153,0.572895513439397,0.34370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| ||
|EntrezGene=17060 | |||
|HGNC= | |||
|UniProt=D3YWR2 | |||
|association_with_transcript=-41bp_to_ENSMUST00000117695_5end | |||
|description=CAGE_peak_3_at_Blnk_5end | |||
|id=chr19:41068679..41068690,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.64e-10!59;UBERON:0007023!8.75e-09!51;UBERON:0004119!1.33e-08!130;UBERON:0000925!1.33e-08!130;UBERON:0006595!1.33e-08!130;UBERON:0001007!2.17e-08!128;UBERON:0001555!2.17e-08!128;UBERON:0007026!2.17e-08!128;UBERON:0004923!4.53e-08!24;UBERON:0000160!6.75e-08!43;UBERON:0004921!1.24e-07!126;UBERON:0004185!1.24e-07!126;UBERON:0000344!1.54e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.53e-12,47;UBERON:0004923,2.08e-10,24;UBERON:0007023,3.63e-10,51;UBERON:0000160,3.77e-10,31;UBERON:0000344,8.42e-09,15;UBERON:0004119,8.77e-08,118;UBERON:0000925,8.77e-08,118;UBERON:0006595,8.77e-08,118;UBERON:0001007,1.14e-07,116;UBERON:0001555,1.14e-07,116;UBERON:0007026,1.14e-07,116;UBERON:0001242,3.58e-07,13;UBERON:0001262,3.58e-07,13;UBERON:0004786,3.58e-07,13;UBERON:0004921,9.16e-07,114 | |||
|phase1_expression=0.160148847104794,2.44282785347553,2.72999543633722,0.90739263392049,2.50447864973174,3.18970616632591,4.43864017131499,0,0,0,0,0,0,0,3.66420737997229,4.45445588257617,0.699561878128147,17.192688012024,18.0991052359575,17.8243653755173,0.935476191661768,0,0.261199789138935,4.7997726838022,5.27641346454491,2.29692785646008,3.87685796543167,3.66301095566011,1.33016393619462,0.504060259519861,4.8780712344167,0,0,0,5.19932915552294,5.48574329683025,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,15.939347575485,0.725362142011344,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,4.49949858640699,5.93319817540185,6.3943210345149,0.599200221036809,1.15265491596466,0,0,0,0,0,0,0,0,0,0.383062014255563,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,3.47837386442013,0,5.439770669662,0,0,0.448026887097336,1.82577746171277,0,0,0,0.422530259330042,0,0,0,2.38140145112336,1.52015919285059,2.52762222507392,1.82694207550496,30.0367945030719,0.742210695324124,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0.578397427679647,0.884610551949874,0.485300549842228,3.5334642953663,1.93950101254089,7.45567044872489,0,0,2.29911349687732,0.11981512450592,0,0,0.149790639404823,0,0.125654352112864,1.04294592115366,0.511430914660661,0.41557608911912,0,0.611036183101898,4.10543003013307,3.53811861807145,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.281105173679186,0.517406741478031,0,0,0,0,0.278047249225598,1.39300866608867,0.823128545631774,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0.878200461164203,0.671032093801859,0.420579897128254,0.205809224758569,1.65209391491899,1.58670339998127,0,0.464473343720877,1.67527699718721,1.81515172161008,0.667134131534611,1.14135375667535,1.42358718463353,0.494096864172033,1.00534083520108,0.994782360205754,1.36474860983384,1.79763881730844,1.94524244887225,1.59313018603494,0.948339504765408,0.228497025219458,0,1.22190796707189,1.74557238450863,0.841629838683823,2.27651533647326,2.80459281161244,3.767969468193,2.34454611451421,0.592905254174298,0,0,0.224862112384854,0,0.241177159752417,0,0.863088412352432,0.972811360650212,0.274561413188081,1.43768206527355,0.744281895337007,0.624075346229121,0.505157755894224,0.179397413521912,0,2.77129785249907,0,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0.637819074629948,1.3109065177259,1.03610989119537,1.01254341007058,10.5553898757491,4.89515115436839,0,1.93155722413313,0.160550589987792,0.234423373184406,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,2.2710413633323,0.178065603667255,0.651547837414304,4.28922319728592,1.32745138339963,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,1.26414703174326,0,0,0,0,0,0.214337035031592,0.532020700926821,1.07021290561242,0,0,0.23467170806371,1.48282449604674,29.3302769413099,6.26567761177624,1.61464426695906,1.5078231232039,1.3130957840345,1.64140899745061,2.62332752966866,0.556275906031529,9.91051108627546,0,1.11116716421827,2.82552685507037,5.33107488111998,5.0331198105435,0.339956859987711,0.979660166265606,1.52019971184866,3.81868247206045,0,0,0.324016022465404,1.04544148007234,1.09181281873089,0.539457385539283,0.991841468704031,1.04702376793612,5.05498395837992,4.34937519160848,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0.288030006257865,1.26404448251271,0,0.308132871494482,2.33857481360031,0.895133478337407,0.79472541912506,0.360586348559907,0.886137163047463,0.504832249740738,0.609654453239999,0.403304740547362,1.16949456887703,0.962118416403295,0.701261413089414,5.8949899739955,0,0,0,1.9318959403219,6.19352168988901,6.41030684935428,6.64541975145104,27.0848936179096,0.564751842617067,1.38097570952153,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,1.35004500046361,1.80128481289688,0.453142408984205,2.07104124700728,0.31136204275253,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,1.60459604795908,0.252697211763798,0,0,0.280924522409647,0.448176066834085,0.229741875822453,0,0.115884325944855,0,0,0.735994600671987,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0,0.499621155875892,0.935726433781634,0.644613162144895,0.191288332068843,1.32354851471709,1.15933917810211 | |||
|short_description=p3@Blnk | |||
}} |
Revision as of 17:36, 13 September 2013
Short description: | p3@Blnk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Blnk_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENSMUST00000117695_5end |
EntrezGene: | Blnk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.53e-12 | 47 |
organ component layer | 2.08e-10 | 24 |
adult organism | 3.63e-10 | 51 |
intestine | 3.77e-10 | 31 |
mucosa | 8.42e-09 | 15 |
endoderm-derived structure | 8.77e-08 | 118 |
endoderm | 8.77e-08 | 118 |
presumptive endoderm | 8.77e-08 | 118 |
digestive system | 1.14e-07 | 116 |
digestive tract | 1.14e-07 | 116 |
primitive gut | 1.14e-07 | 116 |
intestinal mucosa | 3.58e-07 | 13 |
wall of intestine | 3.58e-07 | 13 |
gastrointestinal system mucosa | 3.58e-07 | 13 |
subdivision of digestive tract | 9.16e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.