FFCP PHASE1:Mm9::chr18:60819789..60819826,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104027|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137894_5end|description=CAGE_peak_7_at_Synpo_5end|id=chr18:60819789..60819826,-|ontology_enrichment_celltype=CL:0000239!1.52e-08!6;CL:0000677!1.52e-08!6;CL:0000212!1.52e-08!6;CL:0000584!1.52e-08!6;CL:0000075!3.97e-07!7;CL:0002563!9.61e-07!9;CL:0002251!9.61e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-14,6;CL:0000677,3.71e-14,6;CL:0000584,3.71e-14,6;CL:0000075,5.09e-12,7;CL:0002563,3.61e-09,9;CL:0002251,3.61e-09,9;CL:0000682,2.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.87e-19!43;UBERON:0005409!9.95e-15!59;UBERON:0000344!4.86e-13!15;UBERON:0001242!4.96e-11!13;UBERON:0000060!4.96e-11!13;UBERON:0001262!4.96e-11!13;UBERON:0004786!4.96e-11!13;UBERON:0001007!7.05e-07!128;UBERON:0001555!7.05e-07!128;UBERON:0007026!7.05e-07!128;UBERON:0003350!9.61e-07!9;UBERON:0004808!9.61e-07!9;UBERON:0001277!9.61e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.20e-43,31;UBERON:0005409,7.52e-31,47;UBERON:0000344,3.38e-20,15;UBERON:0001242,1.24e-16,13;UBERON:0001262,1.24e-16,13;UBERON:0004786,1.24e-16,13;UBERON:0004923,1.38e-11,24;UBERON:0001007,2.13e-11,116;UBERON:0001555,2.13e-11,116;UBERON:0007026,2.13e-11,116;UBERON:0004119,4.38e-11,118;UBERON:0000925,4.38e-11,118;UBERON:0006595,4.38e-11,118;UBERON:0004921,9.78e-10,114;UBERON:0002108,2.01e-09,4;UBERON:0003350,3.61e-09,9;UBERON:0004808,3.61e-09,9;UBERON:0001277,3.61e-09,9;UBERON:0000485,2.35e-07,11;UBERON:0000331,2.65e-07,3;UBERON:0002116,2.65e-07,3;UBERON:0001204,2.65e-07,3;UBERON:0001168,2.65e-07,3|phase1_expression=0,28.2670080187882,25.9349566452036,43.2523822168767,32.5582224465126,3.18970616632591,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,4.5881856213434,12.6331032105304,9.04600191934057,8.61884930743556,13.4916627814025,10.5852654499171,3.99114919179548,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,7.45567044872489,0,0,25.8011625760677,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.5453301454725,20.6271441997565,0,0,0.257734922644187,4.03367049246685,7.11609740303585,11.223311940641,22.7773949541366,19.4344766574333,15.3314477368164,12.5342577385925,14.8172706210531,24.268124033664,14.2651112917298,18.5201384126561,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,1.26289438973556,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6144076879015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,1.09181281873089,0,0,0,9.20266310371729,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,1.55572709461131,0.412070114477788,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.749132059759059,0.448176066834085,0.402048282689293,1.42888107384922,0.811190281613988,0.192909220463705,0.824171801606613,0.294397840268795,1.37147700954166,0.532427418478012,0.715308569841963,1.16277133305863,0.658765662907314,0.592302255241736,0,0,0.135804113845862,2.80571135828869,0.355905054372522,0.689531376628944,0,0.619747364743864,0.964533054905707,0,0.233931608445408,2.36358159453128,0,0,0|short_description=p7@Synpo}} | ||
|EntrezGene=104027 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137894_5end | |||
|description=CAGE_peak_7_at_Synpo_5end | |||
|id=chr18:60819789..60819826,- | |||
|ontology_enrichment_celltype=CL:0000239!1.52e-08!6;CL:0000677!1.52e-08!6;CL:0000212!1.52e-08!6;CL:0000584!1.52e-08!6;CL:0000075!3.97e-07!7;CL:0002563!9.61e-07!9;CL:0002251!9.61e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-14,6;CL:0000677,3.71e-14,6;CL:0000584,3.71e-14,6;CL:0000075,5.09e-12,7;CL:0002563,3.61e-09,9;CL:0002251,3.61e-09,9;CL:0000682,2.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.87e-19!43;UBERON:0005409!9.95e-15!59;UBERON:0000344!4.86e-13!15;UBERON:0001242!4.96e-11!13;UBERON:0000060!4.96e-11!13;UBERON:0001262!4.96e-11!13;UBERON:0004786!4.96e-11!13;UBERON:0001007!7.05e-07!128;UBERON:0001555!7.05e-07!128;UBERON:0007026!7.05e-07!128;UBERON:0003350!9.61e-07!9;UBERON:0004808!9.61e-07!9;UBERON:0001277!9.61e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.20e-43,31;UBERON:0005409,7.52e-31,47;UBERON:0000344,3.38e-20,15;UBERON:0001242,1.24e-16,13;UBERON:0001262,1.24e-16,13;UBERON:0004786,1.24e-16,13;UBERON:0004923,1.38e-11,24;UBERON:0001007,2.13e-11,116;UBERON:0001555,2.13e-11,116;UBERON:0007026,2.13e-11,116;UBERON:0004119,4.38e-11,118;UBERON:0000925,4.38e-11,118;UBERON:0006595,4.38e-11,118;UBERON:0004921,9.78e-10,114;UBERON:0002108,2.01e-09,4;UBERON:0003350,3.61e-09,9;UBERON:0004808,3.61e-09,9;UBERON:0001277,3.61e-09,9;UBERON:0000485,2.35e-07,11;UBERON:0000331,2.65e-07,3;UBERON:0002116,2.65e-07,3;UBERON:0001204,2.65e-07,3;UBERON:0001168,2.65e-07,3 | |||
|phase1_expression=0,28.2670080187882,25.9349566452036,43.2523822168767,32.5582224465126,3.18970616632591,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,4.5881856213434,12.6331032105304,9.04600191934057,8.61884930743556,13.4916627814025,10.5852654499171,3.99114919179548,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,7.45567044872489,0,0,25.8011625760677,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.5453301454725,20.6271441997565,0,0,0.257734922644187,4.03367049246685,7.11609740303585,11.223311940641,22.7773949541366,19.4344766574333,15.3314477368164,12.5342577385925,14.8172706210531,24.268124033664,14.2651112917298,18.5201384126561,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,1.26289438973556,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6144076879015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,1.09181281873089,0,0,0,9.20266310371729,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,1.55572709461131,0.412070114477788,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.749132059759059,0.448176066834085,0.402048282689293,1.42888107384922,0.811190281613988,0.192909220463705,0.824171801606613,0.294397840268795,1.37147700954166,0.532427418478012,0.715308569841963,1.16277133305863,0.658765662907314,0.592302255241736,0,0,0.135804113845862,2.80571135828869,0.355905054372522,0.689531376628944,0,0.619747364743864,0.964533054905707,0,0.233931608445408,2.36358159453128,0,0,0 | |||
|short_description=p7@Synpo | |||
}} |
Revision as of 16:26, 13 September 2013
Short description: | p7@Synpo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Synpo_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000137894_5end |
EntrezGene: | Synpo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.71e-14 | 6 |
gut absorptive cell | 3.71e-14 | 6 |
enterocyte | 3.71e-14 | 6 |
columnar/cuboidal epithelial cell | 5.09e-12 | 7 |
intestinal epithelial cell | 3.61e-09 | 9 |
epithelial cell of alimentary canal | 3.61e-09 | 9 |
M cell of gut | 2.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.20e-43 | 31 |
gastrointestinal system | 7.52e-31 | 47 |
mucosa | 3.38e-20 | 15 |
intestinal mucosa | 1.24e-16 | 13 |
wall of intestine | 1.24e-16 | 13 |
gastrointestinal system mucosa | 1.24e-16 | 13 |
organ component layer | 1.38e-11 | 24 |
digestive system | 2.13e-11 | 116 |
digestive tract | 2.13e-11 | 116 |
primitive gut | 2.13e-11 | 116 |
endoderm-derived structure | 4.38e-11 | 118 |
endoderm | 4.38e-11 | 118 |
presumptive endoderm | 4.38e-11 | 118 |
subdivision of digestive tract | 9.78e-10 | 114 |
small intestine | 2.01e-09 | 4 |
epithelium of mucosa | 3.61e-09 | 9 |
gastrointestinal system epithelium | 3.61e-09 | 9 |
intestinal epithelium | 3.61e-09 | 9 |
simple columnar epithelium | 2.35e-07 | 11 |
ileal mucosa | 2.65e-07 | 3 |
ileum | 2.65e-07 | 3 |
mucosa of small intestine | 2.65e-07 | 3 |
wall of small intestine | 2.65e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.