FFCP PHASE1:Hg19::chr5:74807642..74807653,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10087|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2205|TSSclassifier=W|UniProt=Q9Y5P4|association_with_transcript=-188bp_to_ENST00000261415,NM_005713,NM_031361,uc003kds.2,uc003kdu.2,uc011csu.1_5end|description=CAGE_peak_4_at_COL4A3BP_5end|id=chr5:74807642..74807653,-|ontology_enrichment_celltype=CL:0000738!6.94e-35!140;CL:0002087!1.55e-33!119;CL:0002031!1.29e-32!124;CL:0000037!1.81e-30!172;CL:0000566!1.81e-30!172;CL:0002032!9.46e-29!165;CL:0000837!9.46e-29!165;CL:0000988!6.77e-27!182;CL:0000838!8.61e-20!52;CL:0000542!3.87e-19!53;CL:0000051!3.87e-19!53;CL:0002057!7.46e-17!42;CL:0000766!2.69e-15!76;CL:0000860!6.10e-15!45;CL:0000839!2.99e-14!70;CL:0000791!9.70e-14!18;CL:0000789!9.70e-14!18;CL:0002420!9.70e-14!18;CL:0002419!9.70e-14!18;CL:0000790!9.70e-14!18;CL:0000557!3.44e-13!71;CL:0002194!1.68e-12!63;CL:0000576!1.68e-12!63;CL:0000040!1.68e-12!63;CL:0000559!1.68e-12!63;CL:0002009!9.80e-12!65;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0000084!8.08e-11!25;CL:0000827!8.08e-11!25;CL:0000236!1.04e-10!14;CL:0000625!2.27e-09!11;CL:0000945!8.31e-08!24;CL:0000826!8.31e-08!24|ontology_enrichment_celltype_v019=CL:0000236;1.03e-30;13!CL:0000542;1.73e-21;53!CL:0000791;8.10e-17;18!CL:0000789;8.10e-17;18!CL:0002419;8.10e-17;18!CL:0000623;5.67e-16;3!CL:0000945;6.47e-16;24!CL:0000084;9.18e-12;25!CL:0000625;1.78e-11;11!CL:0000775;4.19e-08;3!CL:0000226;1.92e-07;3!CL:0000842;1.92e-07;3|ontology_enrichment_celltype_v019_2=CL:0000838,9.15e-35,52;CL:0000542,5.06e-34,53;CL:0000051,5.06e-34,53;CL:0000236,1.75e-28,14;CL:0000738,1.09e-17,136;CL:0000791,9.77e-17,18;CL:0000789,9.77e-17,18;CL:0002420,9.77e-17,18;CL:0002419,9.77e-17,18;CL:0000790,9.77e-17,18;CL:0002087,2.87e-16,115;CL:0000623,3.78e-16,3;CL:0000825,3.78e-16,3;CL:0000945,5.88e-16,24;CL:0000826,5.88e-16,24;CL:0000037,1.13e-14,168;CL:0000988,1.22e-13,177;CL:0002032,7.98e-13,161;CL:0000837,7.98e-13,161;CL:0002031,2.34e-12,120;CL:0000084,1.05e-11,25;CL:0000827,1.05e-11,25;CL:0000625,2.34e-11,11;CL:0000775,3.92e-08,3;CL:0000226,1.53e-07,3;CL:0000842,1.53e-07,3|ontology_enrichment_development_v019=CL:0000051;1.73e-21;53!CL:0000790;8.10e-17;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.77e-19!102;UBERON:0003061!9.77e-19!102;UBERON:0002193!3.83e-17!112;UBERON:0007023!1.13e-13!115;UBERON:0002371!5.25e-11!80;UBERON:0001474!8.05e-10!86;UBERON:0002405!9.84e-10!115;UBERON:0004765!6.03e-08!101;UBERON:0001434!6.03e-08!101|ontology_enrichment_uberon_v019=UBERON:0000178;1.52e-15;15!UBERON:0000179;1.52e-15;15!UBERON:0000463;1.52e-15;15!UBERON:0002390;1.06e-12;32!UBERON:0002370;4.18e-11;2!UBERON:0005058;4.18e-11;2!UBERON:0009113;4.18e-11;2!UBERON:0002193;8.70e-10;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.58e-15,15;UBERON:0000179,1.58e-15,15;UBERON:0000463,1.58e-15,15;UBERON:0002370,9.16e-12,4;UBERON:0005058,9.16e-12,4;UBERON:0009113,9.16e-12,4;UBERON:0003295,9.16e-12,4;UBERON:0005562,9.16e-12,4;UBERON:0003351,5.35e-08,6;UBERON:0004177,6.47e-07,7;UBERON:0005057,6.47e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0,0.232401601740905,0.284338464974843,0.587200878669695,0.553995408531877,0.802177789880567,0.434021741431704,0,0.647787332037959,0.257575567634187,0.581592955118259,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.320929027076094,0.639337125799041,0.659702600373432,0.199463657621632,0.852449501065388,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,1.75996244461323,3.82297027883492,0.889509253863555,3.41384178053206,5.60554381850417,1.14950487990897,3.96626923670917,1.90810750907073,1.70763890732835,0.587237189370939,3.44045905312706,0,0.560508562981536,0,1.57367816091066,2.75107533924415,0.822405995998037,0.334372990781356,0,0.473447805734733,0,0.111410456885174,0.883817722424512,0.664601683750863,0.812411591295047,0,0.390178042679635,0.164437904603676,0,0,0.889719378972363,0.267540828089713,0,0.226618685395132,0.766440987203842,0.34362744548263,1.01207876807801,0.637130828648193,1.30216690771284,0,0.451725357233318,0.76791966692651,3.74792179657038,0.710331756132051,0.821127996921047,1.20964045934839,2.40696176205157,2.31719046212478,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.11332214173056,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10087 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2205 | |||
|TSSclassifier=W | |||
|UniProt=Q9Y5P4 | |||
|association_with_transcript=-188bp_to_ENST00000261415,NM_005713,NM_031361,uc003kds.2,uc003kdu.2,uc011csu.1_5end | |||
|description=CAGE_peak_4_at_COL4A3BP_5end | |||
|id=chr5:74807642..74807653,- | |||
|ontology_enrichment_celltype=CL:0000738!6.94e-35!140;CL:0002087!1.55e-33!119;CL:0002031!1.29e-32!124;CL:0000037!1.81e-30!172;CL:0000566!1.81e-30!172;CL:0002032!9.46e-29!165;CL:0000837!9.46e-29!165;CL:0000988!6.77e-27!182;CL:0000838!8.61e-20!52;CL:0000542!3.87e-19!53;CL:0000051!3.87e-19!53;CL:0002057!7.46e-17!42;CL:0000766!2.69e-15!76;CL:0000860!6.10e-15!45;CL:0000839!2.99e-14!70;CL:0000791!9.70e-14!18;CL:0000789!9.70e-14!18;CL:0002420!9.70e-14!18;CL:0002419!9.70e-14!18;CL:0000790!9.70e-14!18;CL:0000557!3.44e-13!71;CL:0002194!1.68e-12!63;CL:0000576!1.68e-12!63;CL:0000040!1.68e-12!63;CL:0000559!1.68e-12!63;CL:0002009!9.80e-12!65;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0000084!8.08e-11!25;CL:0000827!8.08e-11!25;CL:0000236!1.04e-10!14;CL:0000625!2.27e-09!11;CL:0000945!8.31e-08!24;CL:0000826!8.31e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.03e-30;13!CL:0000542;1.73e-21;53!CL:0000791;8.10e-17;18!CL:0000789;8.10e-17;18!CL:0002419;8.10e-17;18!CL:0000623;5.67e-16;3!CL:0000945;6.47e-16;24!CL:0000084;9.18e-12;25!CL:0000625;1.78e-11;11!CL:0000775;4.19e-08;3!CL:0000226;1.92e-07;3!CL:0000842;1.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.15e-35,52;CL:0000542,5.06e-34,53;CL:0000051,5.06e-34,53;CL:0000236,1.75e-28,14;CL:0000738,1.09e-17,136;CL:0000791,9.77e-17,18;CL:0000789,9.77e-17,18;CL:0002420,9.77e-17,18;CL:0002419,9.77e-17,18;CL:0000790,9.77e-17,18;CL:0002087,2.87e-16,115;CL:0000623,3.78e-16,3;CL:0000825,3.78e-16,3;CL:0000945,5.88e-16,24;CL:0000826,5.88e-16,24;CL:0000037,1.13e-14,168;CL:0000988,1.22e-13,177;CL:0002032,7.98e-13,161;CL:0000837,7.98e-13,161;CL:0002031,2.34e-12,120;CL:0000084,1.05e-11,25;CL:0000827,1.05e-11,25;CL:0000625,2.34e-11,11;CL:0000775,3.92e-08,3;CL:0000226,1.53e-07,3;CL:0000842,1.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.73e-21;53!CL:0000790;8.10e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.77e-19!102;UBERON:0003061!9.77e-19!102;UBERON:0002193!3.83e-17!112;UBERON:0007023!1.13e-13!115;UBERON:0002371!5.25e-11!80;UBERON:0001474!8.05e-10!86;UBERON:0002405!9.84e-10!115;UBERON:0004765!6.03e-08!101;UBERON:0001434!6.03e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.52e-15;15!UBERON:0000179;1.52e-15;15!UBERON:0000463;1.52e-15;15!UBERON:0002390;1.06e-12;32!UBERON:0002370;4.18e-11;2!UBERON:0005058;4.18e-11;2!UBERON:0009113;4.18e-11;2!UBERON:0002193;8.70e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.58e-15,15;UBERON:0000179,1.58e-15,15;UBERON:0000463,1.58e-15,15;UBERON:0002370,9.16e-12,4;UBERON:0005058,9.16e-12,4;UBERON:0009113,9.16e-12,4;UBERON:0003295,9.16e-12,4;UBERON:0005562,9.16e-12,4;UBERON:0003351,5.35e-08,6;UBERON:0004177,6.47e-07,7;UBERON:0005057,6.47e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0,0.232401601740905,0.284338464974843,0.587200878669695,0.553995408531877,0.802177789880567,0.434021741431704,0,0.647787332037959,0.257575567634187,0.581592955118259,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.320929027076094,0.639337125799041,0.659702600373432,0.199463657621632,0.852449501065388,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,1.75996244461323,3.82297027883492,0.889509253863555,3.41384178053206,5.60554381850417,1.14950487990897,3.96626923670917,1.90810750907073,1.70763890732835,0.587237189370939,3.44045905312706,0,0.560508562981536,0,1.57367816091066,2.75107533924415,0.822405995998037,0.334372990781356,0,0.473447805734733,0,0.111410456885174,0.883817722424512,0.664601683750863,0.812411591295047,0,0.390178042679635,0.164437904603676,0,0,0.889719378972363,0.267540828089713,0,0.226618685395132,0.766440987203842,0.34362744548263,1.01207876807801,0.637130828648193,1.30216690771284,0,0.451725357233318,0.76791966692651,3.74792179657038,0.710331756132051,0.821127996921047,1.20964045934839,2.40696176205157,2.31719046212478,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.11332214173056,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45710687191585,2.1673383622212,2.58753089831421,1.92514554419623,0,0,0,0,0,5.24304916763028,0,2.48649308061621,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,1.44737618286021,1.94142780736755,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,2.02979043692868,0.764637207142375,1.70894156152249,1.19115887728894,2.46817363851717,0,0.540031437238115,2.37937552888281,0.106824071127473,0,0,0,0,0.426851060090485,0,0,0,0,0.324621940274555,0,0,0,0,0,0.481764225311099,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,1.93398740871803,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.658156191461918,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0.144090417154106,0.114536596165916,0.514784993585894,0,0,0,0,0,0.101998217636322,0,0,0,2.55493176133945,0,0.788662062837943,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,0.242998226632099,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.387848869084652,0.13223260174269,0.171086837884329,0,0.106787412567695,0.314408610199332,0.414239055347196,1.48849806543585,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0.138258436151731,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.756215088665154,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.620060389503552,0.126831620387814,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0.455324382702595,0,0,0,0.203909198930495,0.197318320688547,0,0.111231401892069,0.235479278551542,0.15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| |||
|short_description=p4@COL4A3BP | |||
}} |
Revision as of 16:25, 13 September 2013
Short description: | p4@COL4A3BP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_COL4A3BP_5end |
Coexpression cluster: | NA |
Association with transcript: | -188bp_to_ENST00000261415, NM_005713, NM_031361, uc003kds.2, uc003kdu.2, uc011csu.1_5end |
EntrezGene: | COL4A3BP |
HGNC: | 2205 |
UniProt: | Q9Y5P4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.15e-35 | 52 |
lymphocyte | 5.06e-34 | 53 |
common lymphoid progenitor | 5.06e-34 | 53 |
B cell | 1.75e-28 | 14 |
leukocyte | 1.09e-17 | 136 |
mature alpha-beta T cell | 9.77e-17 | 18 |
alpha-beta T cell | 9.77e-17 | 18 |
immature T cell | 9.77e-17 | 18 |
mature T cell | 9.77e-17 | 18 |
immature alpha-beta T cell | 9.77e-17 | 18 |
nongranular leukocyte | 2.87e-16 | 115 |
natural killer cell | 3.78e-16 | 3 |
pro-NK cell | 3.78e-16 | 3 |
lymphocyte of B lineage | 5.88e-16 | 24 |
pro-B cell | 5.88e-16 | 24 |
hematopoietic stem cell | 1.13e-14 | 168 |
hematopoietic cell | 1.22e-13 | 177 |
hematopoietic oligopotent progenitor cell | 7.98e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.98e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 2.34e-12 | 120 |
T cell | 1.05e-11 | 25 |
pro-T cell | 1.05e-11 | 25 |
CD8-positive, alpha-beta T cell | 2.34e-11 | 11 |
neutrophil | 3.92e-08 | 3 |
single nucleate cell | 1.53e-07 | 3 |
mononuclear cell | 1.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.58e-15 | 15 |
haemolymphatic fluid | 1.58e-15 | 15 |
organism substance | 1.58e-15 | 15 |
thymus | 9.16e-12 | 4 |
hemolymphoid system gland | 9.16e-12 | 4 |
thymic region | 9.16e-12 | 4 |
pharyngeal gland | 9.16e-12 | 4 |
thymus primordium | 9.16e-12 | 4 |
pharyngeal epithelium | 5.35e-08 | 6 |
hemopoietic organ | 6.47e-07 | 7 |
immune organ | 6.47e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.