FFCP PHASE1:Mm9::chr18:32557208..32557215,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=266|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:32557208..32557215,+|id=chr18:32557208..32557215,+|ontology_enrichment_celltype=CL:0000838!4.67e-18!12;CL:0000988!7.45e-17!32;CL:0002032!7.45e-17!32;CL:0000037!7.45e-17!32;CL:0000566!7.45e-17!32;CL:0000837!7.45e-17!32;CL:0000084!1.28e-16!11;CL:0000827!1.28e-16!11;CL:0000542!2.26e-16!13;CL:0000051!2.26e-16!13;CL:0002031!1.21e-14!25;CL:0000791!5.62e-14!9;CL:0000789!5.62e-14!9;CL:0002420!5.62e-14!9;CL:0002419!5.62e-14!9;CL:0000790!5.62e-14!9;CL:0000624!5.03e-13!8;CL:0000738!1.22e-11!17;CL:0002087!1.22e-11!17;CL:0000893!3.82e-10!6;CL:0002489!3.82e-10!6;CL:0000898!3.82e-10!6;CL:0000809!3.82e-10!6;CL:0000810!3.82e-10!6;CL:0000895!3.82e-10!6;CL:0000808!3.82e-10!6;CL:0000894!3.82e-10!6;CL:0000806!3.82e-10!6;CL:0000807!3.82e-10!6;CL:0000805!3.82e-10!6;CL:0002425!3.82e-10!6;CL:0002436!3.82e-10!6;CL:0002427!3.82e-10!6;CL:0002428!3.82e-10!6;CL:0002429!3.82e-10!6;CL:0002433!3.82e-10!6;CL:0002431!3.82e-10!6;CL:0002432!3.82e-10!6;CL:0002320!1.01e-09!46;CL:0000134!1.01e-09!46;CL:0000219!2.21e-07!54|ontology_enrichment_celltype_v019_2=CL:0000838,4.68e-60,12;CL:0000624,3.76e-58,8;CL:0000542,2.13e-55,13;CL:0000051,2.13e-55,13;CL:0000084,3.92e-53,11;CL:0000827,3.92e-53,11;CL:0000791,1.17e-51,9;CL:0000789,1.17e-51,9;CL:0002420,1.17e-51,9;CL:0002419,1.17e-51,9;CL:0000790,1.17e-51,9;CL:0000893,7.84e-44,6;CL:0002489,7.84e-44,6;CL:0000898,7.84e-44,6;CL:0000809,7.84e-44,6;CL:0000810,7.84e-44,6;CL:0000895,7.84e-44,6;CL:0000808,7.84e-44,6;CL:0000894,7.84e-44,6;CL:0000806,7.84e-44,6;CL:0000807,7.84e-44,6;CL:0000805,7.84e-44,6;CL:0002425,7.84e-44,6;CL:0002436,7.84e-44,6;CL:0002427,7.84e-44,6;CL:0002428,7.84e-44,6;CL:0002429,7.84e-44,6;CL:0002433,7.84e-44,6;CL:0002431,7.84e-44,6;CL:0002432,7.84e-44,6;CL:0000738,3.09e-42,17;CL:0002087,3.09e-42,17;CL:0002031,1.53e-34,25;CL:0000988,4.30e-32,32;CL:0002032,4.30e-32,32;CL:0000037,4.30e-32,32;CL:0000837,4.30e-32,32;CL:0002320,4.30e-22,46;CL:0000134,4.30e-22,46;CL:0000219,1.07e-18,54;CL:0000723,1.03e-10,91;CL:0000048,1.03e-10,91;CL:0000034,5.48e-10,97;CL:0000815,5.23e-09,1;CL:0000792,5.23e-09,1;CL:0000945,1.24e-08,1;CL:0000236,1.24e-08,1;CL:0000826,1.24e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.58e-21!29;UBERON:0002390!7.61e-20!45;UBERON:0003061!7.61e-20!45;UBERON:0002193!1.24e-19!48;UBERON:0002370!2.02e-16!23;UBERON:0000974!2.02e-16!23;UBERON:0004807!2.02e-16!23;UBERON:0005058!2.02e-16!23;UBERON:0003351!2.02e-16!23;UBERON:0009113!2.02e-16!23;UBERON:0003295!2.02e-16!23;UBERON:0009722!2.02e-16!23;UBERON:0005562!2.02e-16!23;UBERON:0007690!2.02e-16!23;UBERON:0006562!1.66e-15!24;UBERON:0003408!1.66e-15!24;UBERON:0001557!1.66e-15!24;UBERON:0001042!1.66e-15!24;UBERON:0008814!1.66e-15!24;UBERON:0009145!1.66e-15!24;UBERON:0000072!3.54e-13!27;UBERON:0002405!1.35e-11!70;UBERON:0000065!9.16e-11!41;UBERON:0001004!2.32e-10!42;UBERON:0005057!7.53e-10!51;UBERON:0002384!1.01e-09!46;UBERON:0000063!5.62e-09!35;UBERON:0003081!6.41e-09!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.30e-22,46;UBERON:0002370,2.39e-11,23;UBERON:0000974,2.39e-11,23;UBERON:0004807,2.39e-11,23;UBERON:0005058,2.39e-11,23;UBERON:0003351,2.39e-11,23;UBERON:0009113,2.39e-11,23;UBERON:0003295,2.39e-11,23;UBERON:0009722,2.39e-11,23;UBERON:0005562,2.39e-11,23;UBERON:0007690,2.39e-11,23;UBERON:0006562,7.26e-11,24;UBERON:0003408,7.26e-11,24;UBERON:0001557,7.26e-11,24;UBERON:0001042,7.26e-11,24;UBERON:0008814,7.26e-11,24;UBERON:0009145,7.26e-11,24;UBERON:0000072,1.25e-09,27;UBERON:0004177,5.99e-09,29;UBERON:0005057,5.99e-09,29;UBERON:0002390,1.39e-07,45;UBERON:0003061,1.39e-07,45;UBERON:0000077,2.29e-07,35;UBERON:0007811,3.75e-07,36;UBERON:0002193,4.47e-07,48;UBERON:0002405,4.47e-07,48|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,1.267098499365,2.80877431586392,1.54096171402954,1.03703806693937,1.88320802924326,1.83582845079895,0.333109761815663,0.809901069559304,0,0.946386496074713,1.50825876966313,0.42438965179803,0,0.794327609607082,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0.883366073841574,0,0,0,0,0,0.359445373517761,1.79970819298022,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,0.565105371014073,0.410082683163076,0.457556346413045,0.679913719975421,0.979660166265606,0.414599921413271,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.77952493786677,0.358053391334963,0.596044064343795,0.841368146639782,0.147689527174577,0.504832249740738,0.457240839929999,0.201652370273681,0.584747284438515,0.288635524920988,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr18:32557208..32557215,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=266 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:32557208..32557215,+ | |||
|id=chr18:32557208..32557215,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.67e-18!12;CL:0000988!7.45e-17!32;CL:0002032!7.45e-17!32;CL:0000037!7.45e-17!32;CL:0000566!7.45e-17!32;CL:0000837!7.45e-17!32;CL:0000084!1.28e-16!11;CL:0000827!1.28e-16!11;CL:0000542!2.26e-16!13;CL:0000051!2.26e-16!13;CL:0002031!1.21e-14!25;CL:0000791!5.62e-14!9;CL:0000789!5.62e-14!9;CL:0002420!5.62e-14!9;CL:0002419!5.62e-14!9;CL:0000790!5.62e-14!9;CL:0000624!5.03e-13!8;CL:0000738!1.22e-11!17;CL:0002087!1.22e-11!17;CL:0000893!3.82e-10!6;CL:0002489!3.82e-10!6;CL:0000898!3.82e-10!6;CL:0000809!3.82e-10!6;CL:0000810!3.82e-10!6;CL:0000895!3.82e-10!6;CL:0000808!3.82e-10!6;CL:0000894!3.82e-10!6;CL:0000806!3.82e-10!6;CL:0000807!3.82e-10!6;CL:0000805!3.82e-10!6;CL:0002425!3.82e-10!6;CL:0002436!3.82e-10!6;CL:0002427!3.82e-10!6;CL:0002428!3.82e-10!6;CL:0002429!3.82e-10!6;CL:0002433!3.82e-10!6;CL:0002431!3.82e-10!6;CL:0002432!3.82e-10!6;CL:0002320!1.01e-09!46;CL:0000134!1.01e-09!46;CL:0000219!2.21e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.68e-60,12;CL:0000624,3.76e-58,8;CL:0000542,2.13e-55,13;CL:0000051,2.13e-55,13;CL:0000084,3.92e-53,11;CL:0000827,3.92e-53,11;CL:0000791,1.17e-51,9;CL:0000789,1.17e-51,9;CL:0002420,1.17e-51,9;CL:0002419,1.17e-51,9;CL:0000790,1.17e-51,9;CL:0000893,7.84e-44,6;CL:0002489,7.84e-44,6;CL:0000898,7.84e-44,6;CL:0000809,7.84e-44,6;CL:0000810,7.84e-44,6;CL:0000895,7.84e-44,6;CL:0000808,7.84e-44,6;CL:0000894,7.84e-44,6;CL:0000806,7.84e-44,6;CL:0000807,7.84e-44,6;CL:0000805,7.84e-44,6;CL:0002425,7.84e-44,6;CL:0002436,7.84e-44,6;CL:0002427,7.84e-44,6;CL:0002428,7.84e-44,6;CL:0002429,7.84e-44,6;CL:0002433,7.84e-44,6;CL:0002431,7.84e-44,6;CL:0002432,7.84e-44,6;CL:0000738,3.09e-42,17;CL:0002087,3.09e-42,17;CL:0002031,1.53e-34,25;CL:0000988,4.30e-32,32;CL:0002032,4.30e-32,32;CL:0000037,4.30e-32,32;CL:0000837,4.30e-32,32;CL:0002320,4.30e-22,46;CL:0000134,4.30e-22,46;CL:0000219,1.07e-18,54;CL:0000723,1.03e-10,91;CL:0000048,1.03e-10,91;CL:0000034,5.48e-10,97;CL:0000815,5.23e-09,1;CL:0000792,5.23e-09,1;CL:0000945,1.24e-08,1;CL:0000236,1.24e-08,1;CL:0000826,1.24e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.58e-21!29;UBERON:0002390!7.61e-20!45;UBERON:0003061!7.61e-20!45;UBERON:0002193!1.24e-19!48;UBERON:0002370!2.02e-16!23;UBERON:0000974!2.02e-16!23;UBERON:0004807!2.02e-16!23;UBERON:0005058!2.02e-16!23;UBERON:0003351!2.02e-16!23;UBERON:0009113!2.02e-16!23;UBERON:0003295!2.02e-16!23;UBERON:0009722!2.02e-16!23;UBERON:0005562!2.02e-16!23;UBERON:0007690!2.02e-16!23;UBERON:0006562!1.66e-15!24;UBERON:0003408!1.66e-15!24;UBERON:0001557!1.66e-15!24;UBERON:0001042!1.66e-15!24;UBERON:0008814!1.66e-15!24;UBERON:0009145!1.66e-15!24;UBERON:0000072!3.54e-13!27;UBERON:0002405!1.35e-11!70;UBERON:0000065!9.16e-11!41;UBERON:0001004!2.32e-10!42;UBERON:0005057!7.53e-10!51;UBERON:0002384!1.01e-09!46;UBERON:0000063!5.62e-09!35;UBERON:0003081!6.41e-09!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.30e-22,46;UBERON:0002370,2.39e-11,23;UBERON:0000974,2.39e-11,23;UBERON:0004807,2.39e-11,23;UBERON:0005058,2.39e-11,23;UBERON:0003351,2.39e-11,23;UBERON:0009113,2.39e-11,23;UBERON:0003295,2.39e-11,23;UBERON:0009722,2.39e-11,23;UBERON:0005562,2.39e-11,23;UBERON:0007690,2.39e-11,23;UBERON:0006562,7.26e-11,24;UBERON:0003408,7.26e-11,24;UBERON:0001557,7.26e-11,24;UBERON:0001042,7.26e-11,24;UBERON:0008814,7.26e-11,24;UBERON:0009145,7.26e-11,24;UBERON:0000072,1.25e-09,27;UBERON:0004177,5.99e-09,29;UBERON:0005057,5.99e-09,29;UBERON:0002390,1.39e-07,45;UBERON:0003061,1.39e-07,45;UBERON:0000077,2.29e-07,35;UBERON:0007811,3.75e-07,36;UBERON:0002193,4.47e-07,48;UBERON:0002405,4.47e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,1.267098499365,2.80877431586392,1.54096171402954,1.03703806693937,1.88320802924326,1.83582845079895,0.333109761815663,0.809901069559304,0,0.946386496074713,1.50825876966313,0.42438965179803,0,0.794327609607082,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0.883366073841574,0,0,0,0,0,0.359445373517761,1.79970819298022,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,0.565105371014073,0.410082683163076,0.457556346413045,0.679913719975421,0.979660166265606,0.414599921413271,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.77952493786677,0.358053391334963,0.596044064343795,0.841368146639782,0.147689527174577,0.504832249740738,0.457240839929999,0.201652370273681,0.584747284438515,0.288635524920988,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr18:32557208..32557215,+ | |||
}} |
Revision as of 15:54, 13 September 2013
Short description: | p@chr18:32557208..32557215, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:32557208..32557215, + |
Coexpression cluster: | MCL_coexpression_mm9:266 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.30e-22 | 46 |
thymus | 2.39e-11 | 23 |
neck | 2.39e-11 | 23 |
respiratory system epithelium | 2.39e-11 | 23 |
hemolymphoid system gland | 2.39e-11 | 23 |
pharyngeal epithelium | 2.39e-11 | 23 |
thymic region | 2.39e-11 | 23 |
pharyngeal gland | 2.39e-11 | 23 |
entire pharyngeal arch endoderm | 2.39e-11 | 23 |
thymus primordium | 2.39e-11 | 23 |
early pharyngeal endoderm | 2.39e-11 | 23 |
pharynx | 7.26e-11 | 24 |
gland of gut | 7.26e-11 | 24 |
upper respiratory tract | 7.26e-11 | 24 |
chordate pharynx | 7.26e-11 | 24 |
pharyngeal arch system | 7.26e-11 | 24 |
pharyngeal region of foregut | 7.26e-11 | 24 |
segment of respiratory tract | 1.25e-09 | 27 |
hemopoietic organ | 5.99e-09 | 29 |
immune organ | 5.99e-09 | 29 |
hematopoietic system | 1.39e-07 | 45 |
blood island | 1.39e-07 | 45 |
mixed endoderm/mesoderm-derived structure | 2.29e-07 | 35 |
craniocervical region | 3.75e-07 | 36 |
hemolymphoid system | 4.47e-07 | 48 |
immune system | 4.47e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.