FFCP PHASE1:Mm9::chr18:25911987..25911999,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108013|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=484bp_to_ENSMUST00000078609_5end|description=CAGE_peak_6_at_Celf4_5end|id=chr18:25911987..25911999,-|ontology_enrichment_celltype=CL:0000540!1.39e-20!33;CL:0000047!1.39e-20!33;CL:0000031!1.39e-20!33;CL:0000404!1.39e-20!33;CL:0000117!8.75e-19!23;CL:0000337!8.75e-19!23;CL:0000393!1.36e-15!39;CL:0000211!1.36e-15!39;CL:0002319!7.39e-14!43;CL:0000221!2.77e-13!44;CL:0000133!2.77e-13!44;CL:0000055!2.26e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.91e-29,23;CL:0000337,5.91e-29,23;CL:0000540,1.35e-20,33;CL:0000047,1.35e-20,33;CL:0000031,1.35e-20,33;CL:0000404,1.35e-20,33;CL:0000393,1.36e-16,39;CL:0000211,1.36e-16,39;CL:0002319,1.50e-14,43;CL:0000221,4.25e-14,44;CL:0000133,4.25e-14,44;CL:0002613,1.84e-07,3;CL:0002321,5.56e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.65e-34!73;UBERON:0005743!3.65e-34!73;UBERON:0000073!1.26e-33!75;UBERON:0001016!1.26e-33!75;UBERON:0002346!5.14e-28!71;UBERON:0003075!5.14e-28!71;UBERON:0007284!5.14e-28!71;UBERON:0001049!1.16e-27!52;UBERON:0005068!1.16e-27!52;UBERON:0006241!1.16e-27!52;UBERON:0007135!1.16e-27!52;UBERON:0004121!5.82e-27!102;UBERON:0000924!5.82e-27!102;UBERON:0006601!5.82e-27!102;UBERON:0000955!2.70e-26!50;UBERON:0006238!2.70e-26!50;UBERON:0002616!3.04e-25!49;UBERON:0000033!6.46e-25!63;UBERON:0002020!4.07e-24!34;UBERON:0003056!2.83e-22!49;UBERON:0003080!7.74e-21!40;UBERON:0002791!5.49e-20!29;UBERON:0003528!5.49e-20!29;UBERON:0001893!5.49e-20!29;UBERON:0002780!6.02e-20!39;UBERON:0001890!6.02e-20!39;UBERON:0006240!6.02e-20!39;UBERON:0007811!1.80e-13!86;UBERON:0000956!4.11e-13!21;UBERON:0001869!4.11e-13!21;UBERON:0000203!4.11e-13!21;UBERON:0002619!5.81e-11!17;UBERON:0000153!6.28e-11!94;UBERON:0002021!2.01e-09!10;UBERON:0000411!2.01e-09!10;UBERON:0001950!2.01e-09!10;UBERON:0002420!3.27e-08!8;UBERON:0007245!3.27e-08!8;UBERON:0010009!3.27e-08!8;UBERON:0010011!3.27e-08!8;UBERON:0000454!3.27e-08!8;UBERON:0003076!2.76e-07!12;UBERON:0003057!2.76e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.65e-42,54;UBERON:0001017,9.08e-42,73;UBERON:0001016,2.13e-40,75;UBERON:0001049,6.77e-39,52;UBERON:0005068,6.77e-39,52;UBERON:0006241,6.77e-39,52;UBERON:0007135,6.77e-39,52;UBERON:0002346,9.12e-38,64;UBERON:0003075,9.12e-38,64;UBERON:0007284,9.12e-38,64;UBERON:0004121,1.63e-36,95;UBERON:0000924,1.63e-36,95;UBERON:0006601,1.63e-36,95;UBERON:0002020,5.93e-36,34;UBERON:0010371,5.67e-32,73;UBERON:0000955,1.48e-31,47;UBERON:0006238,1.48e-31,47;UBERON:0002616,9.78e-30,46;UBERON:0003528,4.85e-28,29;UBERON:0002791,4.85e-28,29;UBERON:0001893,4.85e-28,29;UBERON:0003056,2.10e-26,49;UBERON:0003080,3.53e-25,40;UBERON:0002780,1.25e-23,39;UBERON:0001890,1.25e-23,39;UBERON:0006240,1.25e-23,39;UBERON:0010314,1.84e-23,92;UBERON:0002619,1.10e-16,17;UBERON:0000956,2.26e-15,21;UBERON:0001869,2.26e-15,21;UBERON:0000203,2.26e-15,21;UBERON:0002420,5.98e-15,8;UBERON:0007245,5.98e-15,8;UBERON:0010009,5.98e-15,8;UBERON:0010011,5.98e-15,8;UBERON:0000454,5.98e-15,8;UBERON:0003076,3.86e-14,12;UBERON:0003057,3.86e-14,12;UBERON:0000025,4.90e-13,114;UBERON:0002021,6.65e-12,10;UBERON:0000411,6.65e-12,10;UBERON:0001950,6.65e-12,10;UBERON:0004111,1.27e-11,122;UBERON:0002240,1.03e-10,6;UBERON:0005174,1.03e-10,6;UBERON:0001137,1.03e-10,6;UBERON:0000369,1.75e-10,5;UBERON:0002435,1.75e-10,5;UBERON:0000204,1.75e-10,5;UBERON:0010082,1.75e-10,5;UBERON:0011216,1.35e-09,194;UBERON:0001948,3.49e-09,5;UBERON:0002315,3.49e-09,5;UBERON:0000483,4.46e-08,174;UBERON:0000119,6.98e-08,176;UBERON:0002950,8.46e-08,4;UBERON:0001891,8.46e-08,4;UBERON:0009616,8.46e-08,4;UBERON:0010286,8.46e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,3.1739458756322,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0.210324961351382,1.42825492201902,1.76694832761291,1.83736198822431,1.0543001812006,1.83843757322004,2.20231761998777,2.68143409978894,3.37934373163736,4.61602007055678,4.48289453651807,4.68822033501084,1.67509799400829,1.12552522006336,4.27835093775068,1.76777151284201,3.41692033917847,2.98239113320481,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,2.92780797011547,3.56059401582874,0,0,0,0,3.14560342750128,1.83000241127451,2.89005009859588,4.69325664519146,5.11430914660661,3.32460871295296,2.43361894601636,0,0,0,0.420883711772948,0,0,0,1.35634336052144,1.15662048557257,0.768682321709099,1.03071897015702,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0.134206418760372,4.41608891984667,1.74937841044784,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,3.04750385139728,0,0,0.94652465824877,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0.566153061577665,0,0.584511715822624,1.58115111178609,5.14114106274891,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,3.68260189205742,2.86447756719698,3.09335728218638,2.74033007908257,3.0215755895588,0.675022500231806,4.05289082901798,0.906284817968409,1.55328093525546,0.103787347584177,0.399024873401031,0.341467211508268,0.729320151204882,0.628839487883947,0.551530525350042,0.666740183404846,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.655490552289177,0.320125762024346,0.34461281373368,0.952587382566147,0.231768651889711,0,0,0.441596760403192,0.685738504770831,0.532427418478012,0.476872379894642,0.290692833264657,0.376437521661322,0.676916863133412,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.77468420592983,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0|short_description=p6@Celf4}} | ||
|EntrezGene=108013 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt= | |||
|association_with_transcript=484bp_to_ENSMUST00000078609_5end | |||
|description=CAGE_peak_6_at_Celf4_5end | |||
|id=chr18:25911987..25911999,- | |||
|ontology_enrichment_celltype=CL:0000540!1.39e-20!33;CL:0000047!1.39e-20!33;CL:0000031!1.39e-20!33;CL:0000404!1.39e-20!33;CL:0000117!8.75e-19!23;CL:0000337!8.75e-19!23;CL:0000393!1.36e-15!39;CL:0000211!1.36e-15!39;CL:0002319!7.39e-14!43;CL:0000221!2.77e-13!44;CL:0000133!2.77e-13!44;CL:0000055!2.26e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.91e-29,23;CL:0000337,5.91e-29,23;CL:0000540,1.35e-20,33;CL:0000047,1.35e-20,33;CL:0000031,1.35e-20,33;CL:0000404,1.35e-20,33;CL:0000393,1.36e-16,39;CL:0000211,1.36e-16,39;CL:0002319,1.50e-14,43;CL:0000221,4.25e-14,44;CL:0000133,4.25e-14,44;CL:0002613,1.84e-07,3;CL:0002321,5.56e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.65e-34!73;UBERON:0005743!3.65e-34!73;UBERON:0000073!1.26e-33!75;UBERON:0001016!1.26e-33!75;UBERON:0002346!5.14e-28!71;UBERON:0003075!5.14e-28!71;UBERON:0007284!5.14e-28!71;UBERON:0001049!1.16e-27!52;UBERON:0005068!1.16e-27!52;UBERON:0006241!1.16e-27!52;UBERON:0007135!1.16e-27!52;UBERON:0004121!5.82e-27!102;UBERON:0000924!5.82e-27!102;UBERON:0006601!5.82e-27!102;UBERON:0000955!2.70e-26!50;UBERON:0006238!2.70e-26!50;UBERON:0002616!3.04e-25!49;UBERON:0000033!6.46e-25!63;UBERON:0002020!4.07e-24!34;UBERON:0003056!2.83e-22!49;UBERON:0003080!7.74e-21!40;UBERON:0002791!5.49e-20!29;UBERON:0003528!5.49e-20!29;UBERON:0001893!5.49e-20!29;UBERON:0002780!6.02e-20!39;UBERON:0001890!6.02e-20!39;UBERON:0006240!6.02e-20!39;UBERON:0007811!1.80e-13!86;UBERON:0000956!4.11e-13!21;UBERON:0001869!4.11e-13!21;UBERON:0000203!4.11e-13!21;UBERON:0002619!5.81e-11!17;UBERON:0000153!6.28e-11!94;UBERON:0002021!2.01e-09!10;UBERON:0000411!2.01e-09!10;UBERON:0001950!2.01e-09!10;UBERON:0002420!3.27e-08!8;UBERON:0007245!3.27e-08!8;UBERON:0010009!3.27e-08!8;UBERON:0010011!3.27e-08!8;UBERON:0000454!3.27e-08!8;UBERON:0003076!2.76e-07!12;UBERON:0003057!2.76e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.65e-42,54;UBERON:0001017,9.08e-42,73;UBERON:0001016,2.13e-40,75;UBERON:0001049,6.77e-39,52;UBERON:0005068,6.77e-39,52;UBERON:0006241,6.77e-39,52;UBERON:0007135,6.77e-39,52;UBERON:0002346,9.12e-38,64;UBERON:0003075,9.12e-38,64;UBERON:0007284,9.12e-38,64;UBERON:0004121,1.63e-36,95;UBERON:0000924,1.63e-36,95;UBERON:0006601,1.63e-36,95;UBERON:0002020,5.93e-36,34;UBERON:0010371,5.67e-32,73;UBERON:0000955,1.48e-31,47;UBERON:0006238,1.48e-31,47;UBERON:0002616,9.78e-30,46;UBERON:0003528,4.85e-28,29;UBERON:0002791,4.85e-28,29;UBERON:0001893,4.85e-28,29;UBERON:0003056,2.10e-26,49;UBERON:0003080,3.53e-25,40;UBERON:0002780,1.25e-23,39;UBERON:0001890,1.25e-23,39;UBERON:0006240,1.25e-23,39;UBERON:0010314,1.84e-23,92;UBERON:0002619,1.10e-16,17;UBERON:0000956,2.26e-15,21;UBERON:0001869,2.26e-15,21;UBERON:0000203,2.26e-15,21;UBERON:0002420,5.98e-15,8;UBERON:0007245,5.98e-15,8;UBERON:0010009,5.98e-15,8;UBERON:0010011,5.98e-15,8;UBERON:0000454,5.98e-15,8;UBERON:0003076,3.86e-14,12;UBERON:0003057,3.86e-14,12;UBERON:0000025,4.90e-13,114;UBERON:0002021,6.65e-12,10;UBERON:0000411,6.65e-12,10;UBERON:0001950,6.65e-12,10;UBERON:0004111,1.27e-11,122;UBERON:0002240,1.03e-10,6;UBERON:0005174,1.03e-10,6;UBERON:0001137,1.03e-10,6;UBERON:0000369,1.75e-10,5;UBERON:0002435,1.75e-10,5;UBERON:0000204,1.75e-10,5;UBERON:0010082,1.75e-10,5;UBERON:0011216,1.35e-09,194;UBERON:0001948,3.49e-09,5;UBERON:0002315,3.49e-09,5;UBERON:0000483,4.46e-08,174;UBERON:0000119,6.98e-08,176;UBERON:0002950,8.46e-08,4;UBERON:0001891,8.46e-08,4;UBERON:0009616,8.46e-08,4;UBERON:0010286,8.46e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,3.1739458756322,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0.210324961351382,1.42825492201902,1.76694832761291,1.83736198822431,1.0543001812006,1.83843757322004,2.20231761998777,2.68143409978894,3.37934373163736,4.61602007055678,4.48289453651807,4.68822033501084,1.67509799400829,1.12552522006336,4.27835093775068,1.76777151284201,3.41692033917847,2.98239113320481,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,2.92780797011547,3.56059401582874,0,0,0,0,3.14560342750128,1.83000241127451,2.89005009859588,4.69325664519146,5.11430914660661,3.32460871295296,2.43361894601636,0,0,0,0.420883711772948,0,0,0,1.35634336052144,1.15662048557257,0.768682321709099,1.03071897015702,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0.134206418760372,4.41608891984667,1.74937841044784,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,3.04750385139728,0,0,0.94652465824877,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0.566153061577665,0,0.584511715822624,1.58115111178609,5.14114106274891,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,3.68260189205742,2.86447756719698,3.09335728218638,2.74033007908257,3.0215755895588,0.675022500231806,4.05289082901798,0.906284817968409,1.55328093525546,0.103787347584177,0.399024873401031,0.341467211508268,0.729320151204882,0.628839487883947,0.551530525350042,0.666740183404846,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.655490552289177,0.320125762024346,0.34461281373368,0.952587382566147,0.231768651889711,0,0,0.441596760403192,0.685738504770831,0.532427418478012,0.476872379894642,0.290692833264657,0.376437521661322,0.676916863133412,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.77468420592983,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p6@Celf4 | |||
}} |
Revision as of 15:51, 13 September 2013
Short description: | p6@Celf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Celf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 484bp_to_ENSMUST00000078609_5end |
EntrezGene: | Celf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.91e-29 | 23 |
neuroblast (sensu Vertebrata) | 5.91e-29 | 23 |
neuron | 1.35e-20 | 33 |
neuronal stem cell | 1.35e-20 | 33 |
neuroblast | 1.35e-20 | 33 |
electrically signaling cell | 1.35e-20 | 33 |
electrically responsive cell | 1.36e-16 | 39 |
electrically active cell | 1.36e-16 | 39 |
neural cell | 1.50e-14 | 43 |
ectodermal cell | 4.25e-14 | 44 |
neurectodermal cell | 4.25e-14 | 44 |
striatum neuron | 1.84e-07 | 3 |
embryonic cell | 5.56e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.