FFCP PHASE1:Hg19::chr5:45696499..45696508,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=348980|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4845|TSSclassifier=S|UniProt=O60741|association_with_transcript=-246bp_to_ENST00000303230_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_HCN1_5end|id=chr5:45696499..45696508,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;3.74e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.05e-08;1!DOID:4549;1.05e-08;1!DOID:5861;1.05e-08;1!DOID:6496;1.05e-08;1|ontology_enrichment_disease_v019_2=DOID:3371,1.22e-08,1;DOID:4549,1.22e-08,1;DOID:5861,1.22e-08,1;DOID:6496,1.22e-08,1|ontology_enrichment_uberon=UBERON:0001049!5.93e-56!57;UBERON:0005068!5.93e-56!57;UBERON:0006241!5.93e-56!57;UBERON:0007135!5.93e-56!57;UBERON:0001017!1.42e-52!82;UBERON:0005743!3.20e-52!86;UBERON:0002020!4.71e-52!34;UBERON:0003528!4.71e-52!34;UBERON:0001869!6.35e-52!32;UBERON:0000073!1.02e-50!94;UBERON:0001016!1.02e-50!94;UBERON:0002619!4.29e-50!22;UBERON:0001893!1.67e-48!34;UBERON:0002616!1.25e-47!59;UBERON:0000955!5.73e-47!69;UBERON:0006238!5.73e-47!69;UBERON:0002791!5.93e-46!33;UBERON:0001950!2.07e-45!20;UBERON:0002780!2.62e-45!41;UBERON:0001890!2.62e-45!41;UBERON:0006240!2.62e-45!41;UBERON:0003075!5.05e-45!86;UBERON:0007284!5.05e-45!86;UBERON:0003080!4.66e-44!42;UBERON:0000956!1.40e-43!25;UBERON:0000203!1.40e-43!25;UBERON:0002346!1.60e-42!90;UBERON:0007023!7.37e-33!115;UBERON:0003056!2.71e-30!61;UBERON:0000033!3.96e-28!123;UBERON:0004121!4.18e-27!169;UBERON:0000153!2.62e-26!129;UBERON:0007811!2.62e-26!129;UBERON:0000924!3.45e-26!173;UBERON:0006601!3.45e-26!173;UBERON:0000200!4.87e-17!6;UBERON:0001871!9.22e-17!7;UBERON:0001872!1.32e-14!5;UBERON:0000349!6.74e-14!5;UBERON:0000025!1.06e-12!194;UBERON:0003076!1.08e-12!15;UBERON:0003057!1.08e-12!15;UBERON:0002420!1.54e-10!9;UBERON:0007245!1.54e-10!9;UBERON:0010009!1.54e-10!9;UBERON:0010011!1.54e-10!9;UBERON:0000454!1.54e-10!9;UBERON:0002308!3.09e-10!9;UBERON:0000125!3.09e-10!9;UBERON:0004733!6.31e-10!12;UBERON:0002028!6.31e-10!12;UBERON:0007277!6.31e-10!12;UBERON:0002021!9.49e-10!5;UBERON:0004111!1.35e-09!241;UBERON:0002771!2.83e-09!3;UBERON:0004732!4.44e-09!13;UBERON:0000064!7.51e-09!219;UBERON:0000475!7.78e-09!365;UBERON:0000988!8.81e-09!3;UBERON:0000483!1.41e-08!309;UBERON:0000119!2.19e-08!312;UBERON:0002298!6.84e-08!8;UBERON:0002680!1.84e-07!9;UBERON:0001895!1.84e-07!9;UBERON:0010092!1.84e-07!9;UBERON:0000477!4.25e-07!286;UBERON:0000369!5.69e-07!4;UBERON:0002435!5.69e-07!4;UBERON:0000204!5.69e-07!4;UBERON:0010082!5.69e-07!4;UBERON:0000481!7.16e-07!347;UBERON:0001870!8.13e-07!2|ontology_enrichment_uberon_v019=UBERON:0001950;4.94e-67;20!UBERON:0002619;5.45e-61;22!UBERON:0001869;8.93e-55;32!UBERON:0000956;1.15e-53;25!UBERON:0000203;1.15e-53;25!UBERON:0001893;3.86e-52;34!UBERON:0002791;5.66e-49;32!UBERON:0003528;1.36e-45;34!UBERON:0002020;1.36e-45;34!UBERON:0001872;1.53e-36;5!UBERON:0002780;1.19e-29;41!UBERON:0001890;1.19e-29;41!UBERON:0000073;6.01e-25;53!UBERON:0002616;6.01e-25;53!UBERON:0000955;8.92e-22;68!UBERON:0001017;1.34e-21;75!UBERON:0000200;4.02e-20;6!UBERON:0001016;9.28e-17;83!UBERON:0002021;2.33e-14;5!UBERON:0001870;4.53e-11;3!UBERON:0001871;3.22e-10;6!UBERON:0002902;3.71e-09;1!UBERON:0002022;3.71e-09;1!UBERON:0009899;3.71e-09;1!UBERON:0007190;3.71e-09;1!UBERON:0002581;1.05e-08;1!UBERON:0001882;1.05e-08;1!UBERON:0001874;1.05e-08;1!UBERON:0005403;1.05e-08;1!UBERON:0000369;2.67e-08;4!UBERON:0002435;2.67e-08;4!UBERON:0000204;2.67e-08;4!UBERON:0002420;6.52e-08;9!UBERON:0007245;6.52e-08;9!UBERON:0010009;6.52e-08;9!UBERON:0010011;6.52e-08;9!UBERON:0000454;6.52e-08;9!UBERON:0011216;1.44e-07;132!UBERON:0007023;1.67e-07;114!UBERON:0000349;8.40e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.84e-67,20;UBERON:0001869,3.81e-62,32;UBERON:0002619,4.33e-61,22;UBERON:0001893,2.03e-58,34;UBERON:0002791,9.20e-55,32;UBERON:0000956,9.36e-54,25;UBERON:0000203,9.36e-54,25;UBERON:0003528,1.81e-51,34;UBERON:0002020,1.81e-51,34;UBERON:0002780,3.59e-48,41;UBERON:0001890,3.59e-48,41;UBERON:0003080,3.59e-48,41;UBERON:0006240,3.59e-48,41;UBERON:0000955,1.04e-47,68;UBERON:0006238,1.04e-47,68;UBERON:0000073,2.75e-46,53;UBERON:0002616,2.75e-46,53;UBERON:0001049,1.14e-43,56;UBERON:0005068,1.14e-43,56;UBERON:0006241,1.14e-43,56;UBERON:0007135,1.14e-43,56;UBERON:0001017,1.73e-43,81;UBERON:0001016,7.42e-39,89;UBERON:0001872,1.54e-36,5;UBERON:0003056,1.26e-31,61;UBERON:0003075,6.56e-29,82;UBERON:0007284,6.56e-29,82;UBERON:0002346,2.03e-27,86;UBERON:0010371,4.06e-22,104;UBERON:0007023,3.29e-20,114;UBERON:0000200,3.57e-20,6;UBERON:0010314,1.00e-18,132;UBERON:0004121,1.14e-18,171;UBERON:0000924,1.14e-18,171;UBERON:0006601,1.14e-18,171;UBERON:0011216,7.77e-15,223;UBERON:0002021,2.23e-14,5;UBERON:0001870,7.30e-11,3;UBERON:0001871,1.91e-10,6;UBERON:0000025,2.08e-10,192;UBERON:0002902,3.06e-09,1;UBERON:0009899,3.06e-09,1;UBERON:0007190,4.19e-09,1;UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=348980 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4845 | |||
|TSSclassifier=S | |||
|UniProt=O60741 | |||
|association_with_transcript=-246bp_to_ENST00000303230_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_HCN1_5end | |||
|id=chr5:45696499..45696508,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.74e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.05e-08;1!DOID:4549;1.05e-08;1!DOID:5861;1.05e-08;1!DOID:6496;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.22e-08,1;DOID:4549,1.22e-08,1;DOID:5861,1.22e-08,1;DOID:6496,1.22e-08,1 | |||
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|short_description=p3@HCN1 | |||
}} |
Revision as of 15:47, 13 September 2013
Short description: | p3@HCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HCN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -246bp_to_ENST00000303230_5end |
EntrezGene: | HCN1 |
HGNC: | 4845 |
UniProt: | O60741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.22e-08 | 1 |
extraosseous chondrosarcoma | 1.22e-08 | 1 |
myxoid chondrosarcoma | 1.22e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.22e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.