FFCP PHASE1:Mm9::chr17:88039650..88039663,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:88039650..88039663,+|id=chr17:88039650..88039663,+|ontology_enrichment_celltype=CL:0000066!4.33e-13!25;CL:0000075!2.51e-11!7;CL:0002076!2.56e-11!15;CL:0002563!4.22e-11!9;CL:0002251!4.22e-11!9;CL:0000239!1.55e-10!6;CL:0000677!1.55e-10!6;CL:0000212!1.55e-10!6;CL:0000584!1.55e-10!6;CL:0000223!2.82e-09!20|ontology_enrichment_celltype_v019_2=CL:0000239,1.38e-23,6;CL:0000677,1.38e-23,6;CL:0000584,1.38e-23,6;CL:0000075,3.76e-20,7;CL:0002563,1.45e-15,9;CL:0002251,1.45e-15,9;CL:0000066,2.91e-14,25;CL:0000682,8.61e-13,3;CL:0002076,4.53e-12,15;CL:0000223,7.59e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.84e-20!15;UBERON:0001242!5.26e-17!13;UBERON:0000060!5.26e-17!13;UBERON:0001262!5.26e-17!13;UBERON:0004786!5.26e-17!13;UBERON:0000160!4.57e-16!43;UBERON:0005409!3.77e-14!59;UBERON:0003350!4.22e-11!9;UBERON:0004808!4.22e-11!9;UBERON:0001277!4.22e-11!9;UBERON:0004923!5.22e-11!24;UBERON:0000485!1.12e-10!11;UBERON:0001007!6.67e-07!128;UBERON:0001555!6.67e-07!128;UBERON:0007026!6.67e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.79e-36,15;UBERON:0000160,1.74e-29,31;UBERON:0001242,4.29e-29,13;UBERON:0001262,4.29e-29,13;UBERON:0004786,4.29e-29,13;UBERON:0004923,5.07e-22,24;UBERON:0005409,5.84e-21,47;UBERON:0002108,4.40e-16,4;UBERON:0003350,1.45e-15,9;UBERON:0004808,1.45e-15,9;UBERON:0001277,1.45e-15,9;UBERON:0000331,9.42e-13,3;UBERON:0002116,9.42e-13,3;UBERON:0001204,9.42e-13,3;UBERON:0001168,9.42e-13,3;UBERON:0000485,1.21e-12,11;UBERON:0001007,4.24e-10,116;UBERON:0001555,4.24e-10,116;UBERON:0007026,4.24e-10,116;UBERON:0004119,7.21e-10,118;UBERON:0000925,7.21e-10,118;UBERON:0006595,7.21e-10,118;UBERON:0001962,2.90e-09,2;UBERON:0001961,2.90e-09,2;UBERON:0001744,2.90e-09,2;UBERON:0004921,7.58e-08,114|phase1_expression=0,5.23463111459042,4.09499315450582,3.62957053568196,2.50447864973174,2.51818907867835,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.03985603307473,5.73523202667925,5.7423196411502,2.15380998079537,3.44753972297422,10.4512880701006,4.78857246543868,1.33038306393183,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.793351699990633,0,0,0,0.201683524623343,0,0,2.84717436926707,0.329397909448022,1.25667604400135,0.596869416123452,0.19496408711912,0.898819408654221,1.94524244887225,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,1.16653475962614,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0.385813221962283,0,0,0,0,0,0|short_description=p@chr17:88039650..88039663,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:88039650..88039663,+ | |||
|id=chr17:88039650..88039663,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.33e-13!25;CL:0000075!2.51e-11!7;CL:0002076!2.56e-11!15;CL:0002563!4.22e-11!9;CL:0002251!4.22e-11!9;CL:0000239!1.55e-10!6;CL:0000677!1.55e-10!6;CL:0000212!1.55e-10!6;CL:0000584!1.55e-10!6;CL:0000223!2.82e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.38e-23,6;CL:0000677,1.38e-23,6;CL:0000584,1.38e-23,6;CL:0000075,3.76e-20,7;CL:0002563,1.45e-15,9;CL:0002251,1.45e-15,9;CL:0000066,2.91e-14,25;CL:0000682,8.61e-13,3;CL:0002076,4.53e-12,15;CL:0000223,7.59e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.84e-20!15;UBERON:0001242!5.26e-17!13;UBERON:0000060!5.26e-17!13;UBERON:0001262!5.26e-17!13;UBERON:0004786!5.26e-17!13;UBERON:0000160!4.57e-16!43;UBERON:0005409!3.77e-14!59;UBERON:0003350!4.22e-11!9;UBERON:0004808!4.22e-11!9;UBERON:0001277!4.22e-11!9;UBERON:0004923!5.22e-11!24;UBERON:0000485!1.12e-10!11;UBERON:0001007!6.67e-07!128;UBERON:0001555!6.67e-07!128;UBERON:0007026!6.67e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.79e-36,15;UBERON:0000160,1.74e-29,31;UBERON:0001242,4.29e-29,13;UBERON:0001262,4.29e-29,13;UBERON:0004786,4.29e-29,13;UBERON:0004923,5.07e-22,24;UBERON:0005409,5.84e-21,47;UBERON:0002108,4.40e-16,4;UBERON:0003350,1.45e-15,9;UBERON:0004808,1.45e-15,9;UBERON:0001277,1.45e-15,9;UBERON:0000331,9.42e-13,3;UBERON:0002116,9.42e-13,3;UBERON:0001204,9.42e-13,3;UBERON:0001168,9.42e-13,3;UBERON:0000485,1.21e-12,11;UBERON:0001007,4.24e-10,116;UBERON:0001555,4.24e-10,116;UBERON:0007026,4.24e-10,116;UBERON:0004119,7.21e-10,118;UBERON:0000925,7.21e-10,118;UBERON:0006595,7.21e-10,118;UBERON:0001962,2.90e-09,2;UBERON:0001961,2.90e-09,2;UBERON:0001744,2.90e-09,2;UBERON:0004921,7.58e-08,114 | |||
|phase1_expression=0,5.23463111459042,4.09499315450582,3.62957053568196,2.50447864973174,2.51818907867835,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.03985603307473,5.73523202667925,5.7423196411502,2.15380998079537,3.44753972297422,10.4512880701006,4.78857246543868,1.33038306393183,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.793351699990633,0,0,0,0.201683524623343,0,0,2.84717436926707,0.329397909448022,1.25667604400135,0.596869416123452,0.19496408711912,0.898819408654221,1.94524244887225,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,1.16653475962614,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr17:88039650..88039663,+ | |||
}} |
Revision as of 15:35, 13 September 2013
Short description: | p@chr17:88039650..88039663, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88039650..88039663, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.38e-23 | 6 |
gut absorptive cell | 1.38e-23 | 6 |
enterocyte | 1.38e-23 | 6 |
columnar/cuboidal epithelial cell | 3.76e-20 | 7 |
intestinal epithelial cell | 1.45e-15 | 9 |
epithelial cell of alimentary canal | 1.45e-15 | 9 |
epithelial cell | 2.91e-14 | 25 |
M cell of gut | 8.61e-13 | 3 |
endo-epithelial cell | 4.53e-12 | 15 |
endodermal cell | 7.59e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.79e-36 | 15 |
intestine | 1.74e-29 | 31 |
intestinal mucosa | 4.29e-29 | 13 |
wall of intestine | 4.29e-29 | 13 |
gastrointestinal system mucosa | 4.29e-29 | 13 |
organ component layer | 5.07e-22 | 24 |
gastrointestinal system | 5.84e-21 | 47 |
small intestine | 4.40e-16 | 4 |
epithelium of mucosa | 1.45e-15 | 9 |
gastrointestinal system epithelium | 1.45e-15 | 9 |
intestinal epithelium | 1.45e-15 | 9 |
ileal mucosa | 9.42e-13 | 3 |
ileum | 9.42e-13 | 3 |
mucosa of small intestine | 9.42e-13 | 3 |
wall of small intestine | 9.42e-13 | 3 |
simple columnar epithelium | 1.21e-12 | 11 |
digestive system | 4.24e-10 | 116 |
digestive tract | 4.24e-10 | 116 |
primitive gut | 4.24e-10 | 116 |
endoderm-derived structure | 7.21e-10 | 118 |
endoderm | 7.21e-10 | 118 |
presumptive endoderm | 7.21e-10 | 118 |
gut-associated lymphoid tissue | 2.90e-09 | 2 |
mucosa-associated lymphoid tissue | 2.90e-09 | 2 |
lymphoid tissue | 2.90e-09 | 2 |
subdivision of digestive tract | 7.58e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.