FFCP PHASE1:Hg19::chr5:2752334..2752382,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=153571|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24226|TSSclassifier=S|UniProt=D6RBL9,B7ZL86|association_with_transcript=0bp_to_ENST00000503940,ENST00000505106,ENST00000505778,ENST00000515640_5end|coexpression_cluster_id=C2821|description=CAGE_peak_3_at_C5orf38_5end|id=chr5:2752334..2752382,+|ontology_enrichment_celltype=CL:0002620!4.63e-11!23;CL:0000057!7.20e-11!75;CL:0002251!3.47e-10!21;CL:0002076!7.09e-10!43;CL:0000136!6.22e-07!15|ontology_enrichment_celltype_v019=CL:0002620;2.37e-13;23!CL:0002251;7.35e-11;20!CL:0002570;5.33e-09;8!CL:0000136;1.91e-08;13!CL:0002551;5.09e-07;6|ontology_enrichment_celltype_v019_2=CL:0002620,1.59e-13,23;CL:0000057,3.18e-12,76;CL:0002251,7.23e-11,20;CL:0000136,2.88e-10,15;CL:0002570,7.75e-09,8;CL:0002551,3.79e-07,6;CL:0002076,6.04e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!8.95e-07!14|ontology_enrichment_disease_v019=DOID:1749;1.83e-07;14|ontology_enrichment_disease_v019_2=DOID:1749,1.18e-07,14|ontology_enrichment_uberon=UBERON:0003102!4.38e-24!95;UBERON:0002199!2.19e-16!45;UBERON:0002416!2.19e-16!45;UBERON:0002097!4.06e-13!40;UBERON:0000475!1.10e-10!365;UBERON:0000915!8.94e-09!52;UBERON:0004923!9.91e-09!57;UBERON:0001004!4.31e-08!72;UBERON:0000165!6.99e-08!28;UBERON:0000930!6.99e-08!28;UBERON:0000064!1.22e-07!219;UBERON:0000310!1.47e-07!10;UBERON:0005157!5.87e-07!51;UBERON:0000078!6.63e-07!18;UBERON:0001013!8.63e-07!14|ontology_enrichment_uberon_v019=UBERON:0003102;2.03e-13;50!UBERON:0002199;2.02e-12;46!UBERON:0002416;2.02e-12;46!UBERON:0000310;4.27e-10;10!UBERON:0002097;1.39e-09;41!UBERON:0001013;5.94e-09;14!UBERON:0001443;6.11e-09;11!UBERON:0002067;1.87e-07;9!UBERON:0002072;6.14e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.43e-19,99;UBERON:0002199,2.68e-17,46;UBERON:0002416,2.68e-17,46;UBERON:0002097,5.24e-13,41;UBERON:0000310,2.33e-10,10;UBERON:0001443,3.56e-09,11;UBERON:0004923,6.36e-09,66;UBERON:0001013,8.12e-09,14;UBERON:0000915,1.17e-07,52;UBERON:0002067,1.59e-07,9;UBERON:0004016,1.59e-07,9;UBERON:0010083,1.59e-07,9;UBERON:0005631,1.79e-07,14;UBERON:0000158,1.79e-07,14;UBERON:0002072,6.65e-07,5|phase1_expression=2.90685406832891,2.78330681058278,0,4.00293193412522,0,0,7.59899634504932,5.05375898741465,3.3954131665979,0.491467873003018,4.18680700783456,0.873765488520689,1.31883489114227,0.123766352960047,0,0,0,0,0,0.984968464614303,2.44800829493104,1.56727360739044,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0.919421224478927,0.6024118375565,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.0843174571537,0,1.59331170856906,0,2.91980922181582,0,0,0,0.523916301990851,2.18577172975525,1.85392221392215,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0,0.264818361626438,0.573673241497627,0,1.12135520028461,0,2.96001058100592,0,0.134710672069688,0,0,0,6.32667865951251,3.43376084513353,5.13424639390004,4.18456305545043,3.64046945795671,2.26622122115384,1.96631129383148,0.408308342509787,0,0.103325781175765,0,0,0,0,0.505008341862199,0.125118519871964,0,2.19488810440419,3.37136575378922,4.95785594391769,0.226864366320042,0.717558542755448,4.27114777637135,2.54318281391474,2.40072876867522,2.88547081867629,2.06112432036503,3.35010341396862,1.5189869901714,2.33848812386877,3.28163906517349,3.86609574297657,3.87950536365149,0.710019185033229,1.5112814734146,1.52604533079439,2.12586938479627,0.818238361772504,2.00763216772303,0.121973706129595,1.19276791489337,0.232387885739037,0.310983165046111,0.252320850875628,4.01475094983413,0,4.5026865673502,1.38134921352481,4.64367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68965315629341,0,0.98775256867763,1.1240175325762,0.603173834469785,0.185176890317059,10.4258657699304,6.23960871167747,0,0,0,0,0,0,8.69224837755203,6.00940313466411,0,0,0,6.56136837907439,1.17587489739202,0.708875486211932,0.895585227028483,1.74380363108377,3.4504441124869,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,17.8828222925941,5.917119267892,0,0,0,1.41849132023278,0.532844358032199,0,0,0,1.62868092146868,0.355391948742546,0,0,0,0,0,0,0,1.19812427745791,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0.831883446123229,0,0,0,0.601892199455438,2.27407504055985,2.0694614258501,0,0.553107505625109,2.69339204851057,0,0,0,0,0,11.5188477149579,4.99306318531491,2.11673205330776,1.73675465473144,1.68808170616869,2.24528075546459,0,3.58195074346692,0,0,3.08419387605311,4.79416658345443,1.14978018419333,0.519254429183621,2.5566283261191,3.14234568938218,0.601519410909855,0.552485933615378,0.459257792658427,0,0.524497659837696,0.451199612907412,0.308061348417659,0,1.46139224653261,0.422206515571503,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=153571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24226 | |||
|TSSclassifier=S | |||
|UniProt=D6RBL9,B7ZL86 | |||
|association_with_transcript=0bp_to_ENST00000503940,ENST00000505106,ENST00000505778,ENST00000515640_5end | |||
|coexpression_cluster_id=C2821 | |||
|description=CAGE_peak_3_at_C5orf38_5end | |||
|id=chr5:2752334..2752382,+ | |||
|ontology_enrichment_celltype=CL:0002620!4.63e-11!23;CL:0000057!7.20e-11!75;CL:0002251!3.47e-10!21;CL:0002076!7.09e-10!43;CL:0000136!6.22e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.37e-13;23!CL:0002251;7.35e-11;20!CL:0002570;5.33e-09;8!CL:0000136;1.91e-08;13!CL:0002551;5.09e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.59e-13,23;CL:0000057,3.18e-12,76;CL:0002251,7.23e-11,20;CL:0000136,2.88e-10,15;CL:0002570,7.75e-09,8;CL:0002551,3.79e-07,6;CL:0002076,6.04e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!8.95e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.83e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.18e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.38e-24!95;UBERON:0002199!2.19e-16!45;UBERON:0002416!2.19e-16!45;UBERON:0002097!4.06e-13!40;UBERON:0000475!1.10e-10!365;UBERON:0000915!8.94e-09!52;UBERON:0004923!9.91e-09!57;UBERON:0001004!4.31e-08!72;UBERON:0000165!6.99e-08!28;UBERON:0000930!6.99e-08!28;UBERON:0000064!1.22e-07!219;UBERON:0000310!1.47e-07!10;UBERON:0005157!5.87e-07!51;UBERON:0000078!6.63e-07!18;UBERON:0001013!8.63e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003102;2.03e-13;50!UBERON:0002199;2.02e-12;46!UBERON:0002416;2.02e-12;46!UBERON:0000310;4.27e-10;10!UBERON:0002097;1.39e-09;41!UBERON:0001013;5.94e-09;14!UBERON:0001443;6.11e-09;11!UBERON:0002067;1.87e-07;9!UBERON:0002072;6.14e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.43e-19,99;UBERON:0002199,2.68e-17,46;UBERON:0002416,2.68e-17,46;UBERON:0002097,5.24e-13,41;UBERON:0000310,2.33e-10,10;UBERON:0001443,3.56e-09,11;UBERON:0004923,6.36e-09,66;UBERON:0001013,8.12e-09,14;UBERON:0000915,1.17e-07,52;UBERON:0002067,1.59e-07,9;UBERON:0004016,1.59e-07,9;UBERON:0010083,1.59e-07,9;UBERON:0005631,1.79e-07,14;UBERON:0000158,1.79e-07,14;UBERON:0002072,6.65e-07,5 | |||
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| |||
|short_description=p3@C5orf38 | |||
}} |
Revision as of 15:22, 13 September 2013
Short description: | p3@C5orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C5orf38_5end |
Coexpression cluster: | C2821_oral_large_pancreatic_Mesenchymal_keratoacanthoma_choriocarcinoma_breast |
Association with transcript: | 0bp_to_ENST00000503940, ENST00000505106, ENST00000505778, ENST00000515640_5end |
EntrezGene: | C5orf38 |
HGNC: | 24226 |
UniProt: | D6RBL9B7ZL86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.59e-13 | 23 |
fibroblast | 3.18e-12 | 76 |
epithelial cell of alimentary canal | 7.23e-11 | 20 |
fat cell | 2.88e-10 | 15 |
mesenchymal stem cell of adipose | 7.75e-09 | 8 |
fibroblast of dermis | 3.79e-07 | 6 |
endo-epithelial cell | 6.04e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.43e-19 | 99 |
integument | 2.68e-17 | 46 |
integumental system | 2.68e-17 | 46 |
skin of body | 5.24e-13 | 41 |
breast | 2.33e-10 | 10 |
chest | 3.56e-09 | 11 |
organ component layer | 6.36e-09 | 66 |
adipose tissue | 8.12e-09 | 14 |
thoracic segment of trunk | 1.17e-07 | 52 |
dermis | 1.59e-07 | 9 |
dermatome | 1.59e-07 | 9 |
future dermis | 1.59e-07 | 9 |
extraembryonic membrane | 1.79e-07 | 14 |
membranous layer | 1.79e-07 | 14 |
hypodermis | 6.65e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.18e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.