FFCP PHASE1:Hg19::chr5:178422299..178422326,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2916|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4598|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000517717_5end|coexpression_cluster_id=C87|description=CAGE_peak_1_at_GRM6_5end|id=chr5:178422299..178422326,-|ontology_enrichment_celltype=CL:0000632!3.28e-07!2|ontology_enrichment_celltype_v019=CL:0000306;1.70e-09;4!CL:0002222;1.70e-09;4!CL:0002224;1.70e-09;4|ontology_enrichment_celltype_v019_2=CL:0000306,1.70e-09,4;CL:0002222,1.70e-09,4;CL:0002224,1.70e-09,4|ontology_enrichment_development_v019=UBERON:0003056;8.74e-45;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000988!3.20e-35!3;UBERON:0001905!4.38e-25!2;UBERON:0002757!4.38e-25!2;UBERON:0010134!4.38e-25!2;UBERON:0002784!4.38e-25!2;UBERON:0005408!4.38e-25!2;UBERON:0001899!4.38e-25!2;UBERON:0002148!2.34e-24!2;UBERON:0009662!2.34e-24!2;UBERON:0006331!1.37e-16!3;UBERON:0002298!1.21e-13!8;UBERON:0003296!4.78e-13!4;UBERON:0010133!4.78e-13!4;UBERON:0002680!3.41e-12!9;UBERON:0001895!3.41e-12!9;UBERON:0010092!3.41e-12!9;UBERON:0000073!7.69e-11!94;UBERON:0001016!7.69e-11!94;UBERON:0000966!1.27e-10!5;UBERON:0005388!1.27e-10!5;UBERON:0001802!1.27e-10!5;UBERON:0003075!6.34e-10!86;UBERON:0007284!6.34e-10!86;UBERON:0000970!7.58e-10!20;UBERON:0005743!9.37e-10!86;UBERON:0002346!1.94e-09!90;UBERON:0002104!2.19e-09!21;UBERON:0004733!2.76e-09!12;UBERON:0002028!2.76e-09!12;UBERON:0007277!2.76e-09!12;UBERON:0004732!1.30e-08!13;UBERON:0000020!1.38e-08!23;UBERON:0001032!3.09e-08!24;UBERON:0004456!3.09e-08!24;UBERON:0001017!4.34e-08!82;UBERON:0001894!7.81e-08!7;UBERON:0006222!7.81e-08!7;UBERON:0003076!1.57e-07!15;UBERON:0003057!1.57e-07!15;UBERON:0000955!1.65e-07!69;UBERON:0006238!1.65e-07!69;UBERON:0002360!4.42e-07!2;UBERON:0000094!4.42e-07!2;UBERON:0007645!4.42e-07!2;UBERON:0000063!6.83e-07!97;UBERON:0004121!8.43e-07!169|ontology_enrichment_uberon_v019=UBERON:0001905;1.45e-66;2!UBERON:0002757;1.45e-66;2!UBERON:0010134;1.45e-66;2!UBERON:0005408;1.45e-66;2!UBERON:0001899;1.45e-66;2!UBERON:0003296;5.98e-34;4!UBERON:0010133;5.98e-34;4!UBERON:0002784;5.98e-34;4!UBERON:0000966;2.22e-27;5!UBERON:0005388;2.22e-27;5!UBERON:0001802;2.22e-27;5!UBERON:0000970;8.28e-27;20!UBERON:0002104;1.44e-25;21!UBERON:0000020;2.07e-23;23!UBERON:0001032;1.82e-22;24!UBERON:0004456;1.82e-22;24!UBERON:0001894;6.48e-20;7!UBERON:0000019;2.33e-16;19!UBERON:0000047;2.33e-16;19!UBERON:0004088;2.33e-16;19!UBERON:0010230;2.33e-16;19!UBERON:0001456;7.02e-15;21!UBERON:0010077;1.70e-09;4!UBERON:0005389;1.70e-09;4!UBERON:0000484;1.70e-09;4!UBERON:0000965;1.70e-09;4!UBERON:0001803;1.70e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.45e-66,2;UBERON:0002757,1.45e-66,2;UBERON:0010134,1.45e-66,2;UBERON:0005408,1.45e-66,2;UBERON:0001899,1.45e-66,2;UBERON:0003296,5.98e-34,4;UBERON:0010133,5.98e-34,4;UBERON:0002784,5.98e-34,4;UBERON:0000970,1.44e-25,21;UBERON:0002104,1.44e-25,21;UBERON:0000966,4.86e-23,6;UBERON:0005388,4.86e-23,6;UBERON:0001802,4.86e-23,6;UBERON:0000020,1.82e-22,24;UBERON:0001032,1.82e-22,24;UBERON:0004456,1.82e-22,24;UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0000019,1.36e-15,20;UBERON:0000047,1.36e-15,20;UBERON:0010312,1.36e-15,20;UBERON:0004088,1.36e-15,20;UBERON:0010230,1.36e-15,20;UBERON:0003072,1.36e-15,20;UBERON:0004128,1.36e-15,20;UBERON:0003071,1.36e-15,20;UBERON:0001456,2.99e-14,22;UBERON:0003056,8.69e-14,61;UBERON:0003075,2.04e-10,82;UBERON:0007284,2.04e-10,82;UBERON:0005085,2.44e-10,31;UBERON:0002346,5.89e-10,86;UBERON:0010077,1.70e-09,4;UBERON:0005389,1.70e-09,4;UBERON:0000484,1.70e-09,4;UBERON:0002546,1.70e-09,4;UBERON:0000965,1.70e-09,4;UBERON:0001803,1.70e-09,4;UBERON:0003073,1.70e-09,4;UBERON:0005426,1.70e-09,4;UBERON:0010371,2.57e-08,104;UBERON:0001444,8.57e-07,49|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27523445472584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2916 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4598 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000517717_5end | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_1_at_GRM6_5end | |||
|id=chr5:178422299..178422326,- | |||
|ontology_enrichment_celltype=CL:0000632!3.28e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.70e-09;4!CL:0002222;1.70e-09;4!CL:0002224;1.70e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.70e-09,4;CL:0002222,1.70e-09,4;CL:0002224,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.74e-45;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!3.20e-35!3;UBERON:0001905!4.38e-25!2;UBERON:0002757!4.38e-25!2;UBERON:0010134!4.38e-25!2;UBERON:0002784!4.38e-25!2;UBERON:0005408!4.38e-25!2;UBERON:0001899!4.38e-25!2;UBERON:0002148!2.34e-24!2;UBERON:0009662!2.34e-24!2;UBERON:0006331!1.37e-16!3;UBERON:0002298!1.21e-13!8;UBERON:0003296!4.78e-13!4;UBERON:0010133!4.78e-13!4;UBERON:0002680!3.41e-12!9;UBERON:0001895!3.41e-12!9;UBERON:0010092!3.41e-12!9;UBERON:0000073!7.69e-11!94;UBERON:0001016!7.69e-11!94;UBERON:0000966!1.27e-10!5;UBERON:0005388!1.27e-10!5;UBERON:0001802!1.27e-10!5;UBERON:0003075!6.34e-10!86;UBERON:0007284!6.34e-10!86;UBERON:0000970!7.58e-10!20;UBERON:0005743!9.37e-10!86;UBERON:0002346!1.94e-09!90;UBERON:0002104!2.19e-09!21;UBERON:0004733!2.76e-09!12;UBERON:0002028!2.76e-09!12;UBERON:0007277!2.76e-09!12;UBERON:0004732!1.30e-08!13;UBERON:0000020!1.38e-08!23;UBERON:0001032!3.09e-08!24;UBERON:0004456!3.09e-08!24;UBERON:0001017!4.34e-08!82;UBERON:0001894!7.81e-08!7;UBERON:0006222!7.81e-08!7;UBERON:0003076!1.57e-07!15;UBERON:0003057!1.57e-07!15;UBERON:0000955!1.65e-07!69;UBERON:0006238!1.65e-07!69;UBERON:0002360!4.42e-07!2;UBERON:0000094!4.42e-07!2;UBERON:0007645!4.42e-07!2;UBERON:0000063!6.83e-07!97;UBERON:0004121!8.43e-07!169 | |||
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|short_description=p1@GRM6 | |||
}} |
Revision as of 15:09, 13 September 2013
Short description: | p1@GRM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GRM6_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000517717_5end |
EntrezGene: | GRM6 |
HGNC: | 4598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.70e-09 | 4 |
vertebrate lens cell | 1.70e-09 | 4 |
lens epithelial cell | 1.70e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.