FFCP PHASE1:Mm9::chr17:37330834..37330842,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24108|HGNC=|MCL_coexpression_id=2211|UniProt=P63072|association_with_transcript=0bp_to_ENSMUST00000038844,NM_023137,uc008cmi.2_5end|description=CAGE_peak_2_at_Ubd_5end|id=chr17:37330834..37330842,+|ontology_enrichment_celltype=CL:0000239!1.17e-08!6;CL:0000677!1.17e-08!6;CL:0000212!1.17e-08!6;CL:0000584!1.17e-08!6;CL:0000075!2.44e-07!7;CL:0000473!2.81e-07!3;CL:0000627!2.81e-07!3;CL:0000682!2.81e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,1.36e-18,3;CL:0000239,1.93e-09,6;CL:0000677,1.93e-09,6;CL:0000584,1.93e-09,6;CL:0000473,2.74e-08,7;CL:0000066,3.10e-08,25;CL:0000075,3.63e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.29e-15!15;UBERON:0001242!1.09e-11!13;UBERON:0000060!1.09e-11!13;UBERON:0001262!1.09e-11!13;UBERON:0004786!1.09e-11!13;UBERON:0004923!6.51e-10!24;UBERON:0000160!2.18e-09!43;UBERON:0001007!5.00e-09!128;UBERON:0001555!5.00e-09!128;UBERON:0007026!5.00e-09!128;UBERON:0004119!9.21e-09!130;UBERON:0000925!9.21e-09!130;UBERON:0006595!9.21e-09!130;UBERON:0004921!1.43e-07!126;UBERON:0004185!1.43e-07!126;UBERON:0005409!2.25e-07!59;UBERON:0002370!6.56e-07!23;UBERON:0000974!6.56e-07!23;UBERON:0004807!6.56e-07!23;UBERON:0005058!6.56e-07!23;UBERON:0003351!6.56e-07!23;UBERON:0009113!6.56e-07!23;UBERON:0003295!6.56e-07!23;UBERON:0009722!6.56e-07!23;UBERON:0005562!6.56e-07!23;UBERON:0007690!6.56e-07!23;UBERON:0000331!6.95e-07!3;UBERON:0002116!6.95e-07!3;UBERON:0001204!6.95e-07!3;UBERON:0001168!6.95e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.41e-24,15;UBERON:0001242,3.51e-16,13;UBERON:0001262,3.51e-16,13;UBERON:0004786,3.51e-16,13;UBERON:0004923,4.38e-15,24;UBERON:0001962,7.29e-13,2;UBERON:0001961,7.29e-13,2;UBERON:0001744,7.29e-13,2;UBERON:0000160,1.87e-11,31;UBERON:0002465,7.10e-09,3;UBERON:0000331,9.29e-09,3;UBERON:0002116,9.29e-09,3;UBERON:0001204,9.29e-09,3;UBERON:0001168,9.29e-09,3;UBERON:0007023,2.32e-08,51;UBERON:0005409,2.90e-07,47;UBERON:0003199,3.67e-07,1;UBERON:0002108,8.90e-07,4|phase1_expression=0,6.63053274514786,1.36499771816861,0.90739263392049,0,0.671517087647559,2.56973904655078,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,4.47978783821539,2.75291137280604,5.16808767703518,4.30761996159075,4.09395342103189,1.14014051673824,6.04872311423834,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0.144599356919912,1.76922110389975,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,1.32225283331772,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,1.58005560314089,0,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.15241361331,0.201652370273681,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Ubd}} | ||
|EntrezGene=24108 | |||
|HGNC= | |||
|MCL_coexpression_id=2211 | |||
|UniProt=P63072 | |||
|association_with_transcript=0bp_to_ENSMUST00000038844,NM_023137,uc008cmi.2_5end | |||
|description=CAGE_peak_2_at_Ubd_5end | |||
|id=chr17:37330834..37330842,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.17e-08!6;CL:0000677!1.17e-08!6;CL:0000212!1.17e-08!6;CL:0000584!1.17e-08!6;CL:0000075!2.44e-07!7;CL:0000473!2.81e-07!3;CL:0000627!2.81e-07!3;CL:0000682!2.81e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.36e-18,3;CL:0000239,1.93e-09,6;CL:0000677,1.93e-09,6;CL:0000584,1.93e-09,6;CL:0000473,2.74e-08,7;CL:0000066,3.10e-08,25;CL:0000075,3.63e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.29e-15!15;UBERON:0001242!1.09e-11!13;UBERON:0000060!1.09e-11!13;UBERON:0001262!1.09e-11!13;UBERON:0004786!1.09e-11!13;UBERON:0004923!6.51e-10!24;UBERON:0000160!2.18e-09!43;UBERON:0001007!5.00e-09!128;UBERON:0001555!5.00e-09!128;UBERON:0007026!5.00e-09!128;UBERON:0004119!9.21e-09!130;UBERON:0000925!9.21e-09!130;UBERON:0006595!9.21e-09!130;UBERON:0004921!1.43e-07!126;UBERON:0004185!1.43e-07!126;UBERON:0005409!2.25e-07!59;UBERON:0002370!6.56e-07!23;UBERON:0000974!6.56e-07!23;UBERON:0004807!6.56e-07!23;UBERON:0005058!6.56e-07!23;UBERON:0003351!6.56e-07!23;UBERON:0009113!6.56e-07!23;UBERON:0003295!6.56e-07!23;UBERON:0009722!6.56e-07!23;UBERON:0005562!6.56e-07!23;UBERON:0007690!6.56e-07!23;UBERON:0000331!6.95e-07!3;UBERON:0002116!6.95e-07!3;UBERON:0001204!6.95e-07!3;UBERON:0001168!6.95e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.41e-24,15;UBERON:0001242,3.51e-16,13;UBERON:0001262,3.51e-16,13;UBERON:0004786,3.51e-16,13;UBERON:0004923,4.38e-15,24;UBERON:0001962,7.29e-13,2;UBERON:0001961,7.29e-13,2;UBERON:0001744,7.29e-13,2;UBERON:0000160,1.87e-11,31;UBERON:0002465,7.10e-09,3;UBERON:0000331,9.29e-09,3;UBERON:0002116,9.29e-09,3;UBERON:0001204,9.29e-09,3;UBERON:0001168,9.29e-09,3;UBERON:0007023,2.32e-08,51;UBERON:0005409,2.90e-07,47;UBERON:0003199,3.67e-07,1;UBERON:0002108,8.90e-07,4 | |||
|phase1_expression=0,6.63053274514786,1.36499771816861,0.90739263392049,0,0.671517087647559,2.56973904655078,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,4.47978783821539,2.75291137280604,5.16808767703518,4.30761996159075,4.09395342103189,1.14014051673824,6.04872311423834,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0.144599356919912,1.76922110389975,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,1.32225283331772,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,1.58005560314089,0,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.15241361331,0.201652370273681,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Ubd | |||
}} |
Revision as of 14:31, 13 September 2013
Short description: | p2@Ubd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ubd_5end |
Coexpression cluster: | MCL_coexpression_mm9:2211 |
Association with transcript: | 0bp_to_ENSMUST00000038844, NM_023137, uc008cmi.2_5end |
EntrezGene: | Ubd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.36e-18 | 3 |
brush border epithelial cell | 1.93e-09 | 6 |
gut absorptive cell | 1.93e-09 | 6 |
enterocyte | 1.93e-09 | 6 |
defensive cell | 2.74e-08 | 7 |
epithelial cell | 3.10e-08 | 25 |
columnar/cuboidal epithelial cell | 3.63e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.41e-24 | 15 |
intestinal mucosa | 3.51e-16 | 13 |
wall of intestine | 3.51e-16 | 13 |
gastrointestinal system mucosa | 3.51e-16 | 13 |
organ component layer | 4.38e-15 | 24 |
gut-associated lymphoid tissue | 7.29e-13 | 2 |
mucosa-associated lymphoid tissue | 7.29e-13 | 2 |
lymphoid tissue | 7.29e-13 | 2 |
intestine | 1.87e-11 | 31 |
lymphoid system | 7.10e-09 | 3 |
ileal mucosa | 9.29e-09 | 3 |
ileum | 9.29e-09 | 3 |
mucosa of small intestine | 9.29e-09 | 3 |
wall of small intestine | 9.29e-09 | 3 |
adult organism | 2.32e-08 | 51 |
gastrointestinal system | 2.90e-07 | 47 |
egg chamber | 3.67e-07 | 1 |
small intestine | 8.90e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.