FFCP PHASE1:Mm9::chr17:28495649..28495673,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22157|HGNC=|MCL_coexpression_id=97|UniProt=F7BGL3,Q3TP89|association_with_transcript=-10bp_to_ENSMUST00000148188,uc008bqu.1_5end|description=CAGE_peak_2_at_Tulp1_5end|id=chr17:28495649..28495673,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.32e-14,3;CL:0000351,1.32e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!5.39e-10!17;UBERON:0005157!2.31e-08!27;UBERON:0002048!4.20e-08!14;UBERON:0000117!4.20e-08!14;UBERON:0000171!4.20e-08!14;UBERON:0000170!4.20e-08!14;UBERON:0005597!4.20e-08!14;UBERON:0000118!4.20e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.32e-14,3;UBERON:0000307,1.32e-14,3;UBERON:0007010,1.32e-14,3;UBERON:0005631,4.44e-14,3;UBERON:0000478,4.44e-14,3;UBERON:0000158,4.44e-14,3;UBERON:0005153,1.31e-11,17;UBERON:0001987,6.10e-10,2;UBERON:0003124,6.10e-10,2;UBERON:0004340,6.10e-10,2;UBERON:0005157,9.48e-10,20;UBERON:0003100,1.09e-09,11;UBERON:0001911,2.42e-09,2;UBERON:0000076,2.42e-09,2;UBERON:0005333,2.42e-09,2;UBERON:0008425,2.42e-09,2;UBERON:0005311,2.42e-09,2;UBERON:0002048,1.44e-07,14;UBERON:0000117,1.44e-07,14;UBERON:0000171,1.44e-07,14;UBERON:0000170,1.44e-07,14;UBERON:0005597,1.44e-07,14;UBERON:0000118,1.44e-07,14|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0,8.65182387070309,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0,0,0,0,0,0,0.150704817835715,0.544291993210623,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,1.0447564995665,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0,0,0,0.268412837520744,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0.162964976442026,0.169745085775188,0.938760993154008,5.86271901046355,9.52174563544055,6.43941037930736,0.788175720530955,1.99318220683897,0.797273843287435,0.163863314715738,0.345369963731791,1.73578870297814,0,0,2.45882136509518,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13678724400706,0.651547837414304,0.164970122972535,1.32745138339963,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,7.50949465803873,9.32061111800809,0.220528398054962,0,0,0.361877549568935,0.238744688006273,0.492422699235184,0,0,0,0.206386867963223,1.29636169158798,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0,7.45607175704311,0,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0,0.226730383615211,13.763129109192,35.7958287871808,29.3798078637137,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.628839487883947,0.551530525350042,0,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.188626341386076,0,0.448176066834085,0.34461281373368,0.476293691283074,0.579421629724277,0.38581844092741,0.824171801606613,0,0.342869252385415,0.70990322463735,0.238436189947321,0.290692833264657,0.564656282491984,0.423073039458382,1.46342378298218,1.05227884575137,0.407412341537585,0,0.355905054372522,0.886540341380071,0.818462086339379,0.309873682371932,0.385813221962283,0.499621155875892,0.935726433781634,0.429742108096597,0.382576664137687,0,0.231867835620421|short_description=p2@Tulp1}} | ||
|EntrezGene=22157 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=F7BGL3,Q3TP89 | |||
|association_with_transcript=-10bp_to_ENSMUST00000148188,uc008bqu.1_5end | |||
|description=CAGE_peak_2_at_Tulp1_5end | |||
|id=chr17:28495649..28495673,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.32e-14,3;CL:0000351,1.32e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!5.39e-10!17;UBERON:0005157!2.31e-08!27;UBERON:0002048!4.20e-08!14;UBERON:0000117!4.20e-08!14;UBERON:0000171!4.20e-08!14;UBERON:0000170!4.20e-08!14;UBERON:0005597!4.20e-08!14;UBERON:0000118!4.20e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.32e-14,3;UBERON:0000307,1.32e-14,3;UBERON:0007010,1.32e-14,3;UBERON:0005631,4.44e-14,3;UBERON:0000478,4.44e-14,3;UBERON:0000158,4.44e-14,3;UBERON:0005153,1.31e-11,17;UBERON:0001987,6.10e-10,2;UBERON:0003124,6.10e-10,2;UBERON:0004340,6.10e-10,2;UBERON:0005157,9.48e-10,20;UBERON:0003100,1.09e-09,11;UBERON:0001911,2.42e-09,2;UBERON:0000076,2.42e-09,2;UBERON:0005333,2.42e-09,2;UBERON:0008425,2.42e-09,2;UBERON:0005311,2.42e-09,2;UBERON:0002048,1.44e-07,14;UBERON:0000117,1.44e-07,14;UBERON:0000171,1.44e-07,14;UBERON:0000170,1.44e-07,14;UBERON:0005597,1.44e-07,14;UBERON:0000118,1.44e-07,14 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0,8.65182387070309,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0,0,0,0,0,0,0.150704817835715,0.544291993210623,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,1.0447564995665,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0,0,0,0.268412837520744,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0.162964976442026,0.169745085775188,0.938760993154008,5.86271901046355,9.52174563544055,6.43941037930736,0.788175720530955,1.99318220683897,0.797273843287435,0.163863314715738,0.345369963731791,1.73578870297814,0,0,2.45882136509518,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13678724400706,0.651547837414304,0.164970122972535,1.32745138339963,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,7.50949465803873,9.32061111800809,0.220528398054962,0,0,0.361877549568935,0.238744688006273,0.492422699235184,0,0,0,0.206386867963223,1.29636169158798,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0,7.45607175704311,0,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0,0.226730383615211,13.763129109192,35.7958287871808,29.3798078637137,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.628839487883947,0.551530525350042,0,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.188626341386076,0,0.448176066834085,0.34461281373368,0.476293691283074,0.579421629724277,0.38581844092741,0.824171801606613,0,0.342869252385415,0.70990322463735,0.238436189947321,0.290692833264657,0.564656282491984,0.423073039458382,1.46342378298218,1.05227884575137,0.407412341537585,0,0.355905054372522,0.886540341380071,0.818462086339379,0.309873682371932,0.385813221962283,0.499621155875892,0.935726433781634,0.429742108096597,0.382576664137687,0,0.231867835620421 | |||
|short_description=p2@Tulp1 | |||
}} |
Revision as of 13:56, 13 September 2013
Short description: | p2@Tulp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tulp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | -10bp_to_ENSMUST00000148188, uc008bqu.1_5end |
EntrezGene: | Tulp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.32e-14 | 3 |
trophoblast cell | 1.32e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.32e-14 | 3 |
blastula | 1.32e-14 | 3 |
cleaving embryo | 1.32e-14 | 3 |
extraembryonic membrane | 4.44e-14 | 3 |
extraembryonic structure | 4.44e-14 | 3 |
membranous layer | 4.44e-14 | 3 |
epithelial bud | 1.31e-11 | 17 |
placenta | 6.10e-10 | 2 |
chorion | 6.10e-10 | 2 |
allantois | 6.10e-10 | 2 |
epithelial fold | 9.48e-10 | 20 |
female organism | 1.09e-09 | 11 |
mammary gland | 2.42e-09 | 2 |
external ectoderm | 2.42e-09 | 2 |
mammary bud | 2.42e-09 | 2 |
mammary ridge | 2.42e-09 | 2 |
mammary placode | 2.42e-09 | 2 |
lung | 1.44e-07 | 14 |
respiratory tube | 1.44e-07 | 14 |
respiration organ | 1.44e-07 | 14 |
pair of lungs | 1.44e-07 | 14 |
lung primordium | 1.44e-07 | 14 |
lung bud | 1.44e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.