FFCP PHASE1:Mm9::chr16:91548532..91548555,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:91548532..91548555,-|id=chr16:91548532..91548555,-|ontology_enrichment_celltype=CL:0002563!2.44e-23!9;CL:0002251!2.44e-23!9;CL:0000239!5.15e-16!6;CL:0000677!5.15e-16!6;CL:0000212!5.15e-16!6;CL:0000584!5.15e-16!6;CL:0000066!2.98e-15!25;CL:0000075!1.31e-13!7;CL:0002076!3.03e-13!15;CL:0000223!1.64e-11!20;CL:0000063!6.24e-11!66;CL:0000791!2.65e-09!9;CL:0000789!2.65e-09!9;CL:0002420!2.65e-09!9;CL:0002419!2.65e-09!9;CL:0000790!2.65e-09!9;CL:0002250!6.79e-09!3;CL:0000473!1.81e-08!3;CL:0000627!1.81e-08!3;CL:0000682!1.81e-08!3;CL:0000624!1.66e-07!8;CL:0000084!1.76e-07!11;CL:0000827!1.76e-07!11;CL:0000838!8.48e-07!12|ontology_enrichment_celltype_v019_2=CL:0002563,7.55e-50,9;CL:0002251,7.55e-50,9;CL:0000239,1.54e-33,6;CL:0000677,1.54e-33,6;CL:0000584,1.54e-33,6;CL:0000066,1.04e-30,25;CL:0002076,1.50e-29,15;CL:0000075,1.02e-28,7;CL:0000223,6.40e-22,20;CL:0002250,9.33e-18,3;CL:0000682,8.11e-17,3;CL:0000473,1.60e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!1.66e-31!13;UBERON:0000060!1.66e-31!13;UBERON:0001262!1.66e-31!13;UBERON:0004786!1.66e-31!13;UBERON:0000344!4.34e-31!15;UBERON:0000160!3.43e-25!43;UBERON:0003350!2.44e-23!9;UBERON:0004808!2.44e-23!9;UBERON:0001277!2.44e-23!9;UBERON:0000485!9.47e-19!11;UBERON:0004923!3.66e-18!24;UBERON:0005409!7.03e-17!59;UBERON:0001007!7.46e-09!128;UBERON:0001555!7.46e-09!128;UBERON:0007026!7.46e-09!128;UBERON:0004119!1.27e-08!130;UBERON:0000925!1.27e-08!130;UBERON:0006595!1.27e-08!130;UBERON:0004921!3.31e-08!126;UBERON:0004185!3.31e-08!126;UBERON:0000331!1.71e-07!3;UBERON:0002116!1.71e-07!3;UBERON:0001204!1.71e-07!3;UBERON:0001168!1.71e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.55e-50,9;UBERON:0004808,7.55e-50,9;UBERON:0001277,7.55e-50,9;UBERON:0000485,1.25e-40,11;UBERON:0001242,3.06e-34,13;UBERON:0001262,3.06e-34,13;UBERON:0004786,3.06e-34,13;UBERON:0000344,1.50e-29,15;UBERON:0000160,1.84e-20,31;UBERON:0004923,4.25e-18,24;UBERON:0005409,5.12e-13,47;UBERON:0003929,5.23e-11,55;UBERON:0000490,6.37e-09,66;UBERON:0005911,1.81e-08,69|phase1_expression=0,4.18770489167233,2.27499619694768,8.77146212789807,5.50985302940982,1.51091344720701,1.16806320297763,0.774739940649458,0.140788722151667,0,0,0,2.56801094896809,1.31130603628496,0,0,0,0,0,0,0,0,0,0.47997726838022,0,2.29692785646008,1.29228598847722,1.29282739611533,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,2.88851619751275,1.99481574430191,5.10423390655923,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0.128867461322093,0,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,1.08069024937347,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr16:91548532..91548555,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:91548532..91548555,- | |||
|id=chr16:91548532..91548555,- | |||
|ontology_enrichment_celltype=CL:0002563!2.44e-23!9;CL:0002251!2.44e-23!9;CL:0000239!5.15e-16!6;CL:0000677!5.15e-16!6;CL:0000212!5.15e-16!6;CL:0000584!5.15e-16!6;CL:0000066!2.98e-15!25;CL:0000075!1.31e-13!7;CL:0002076!3.03e-13!15;CL:0000223!1.64e-11!20;CL:0000063!6.24e-11!66;CL:0000791!2.65e-09!9;CL:0000789!2.65e-09!9;CL:0002420!2.65e-09!9;CL:0002419!2.65e-09!9;CL:0000790!2.65e-09!9;CL:0002250!6.79e-09!3;CL:0000473!1.81e-08!3;CL:0000627!1.81e-08!3;CL:0000682!1.81e-08!3;CL:0000624!1.66e-07!8;CL:0000084!1.76e-07!11;CL:0000827!1.76e-07!11;CL:0000838!8.48e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.55e-50,9;CL:0002251,7.55e-50,9;CL:0000239,1.54e-33,6;CL:0000677,1.54e-33,6;CL:0000584,1.54e-33,6;CL:0000066,1.04e-30,25;CL:0002076,1.50e-29,15;CL:0000075,1.02e-28,7;CL:0000223,6.40e-22,20;CL:0002250,9.33e-18,3;CL:0000682,8.11e-17,3;CL:0000473,1.60e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!1.66e-31!13;UBERON:0000060!1.66e-31!13;UBERON:0001262!1.66e-31!13;UBERON:0004786!1.66e-31!13;UBERON:0000344!4.34e-31!15;UBERON:0000160!3.43e-25!43;UBERON:0003350!2.44e-23!9;UBERON:0004808!2.44e-23!9;UBERON:0001277!2.44e-23!9;UBERON:0000485!9.47e-19!11;UBERON:0004923!3.66e-18!24;UBERON:0005409!7.03e-17!59;UBERON:0001007!7.46e-09!128;UBERON:0001555!7.46e-09!128;UBERON:0007026!7.46e-09!128;UBERON:0004119!1.27e-08!130;UBERON:0000925!1.27e-08!130;UBERON:0006595!1.27e-08!130;UBERON:0004921!3.31e-08!126;UBERON:0004185!3.31e-08!126;UBERON:0000331!1.71e-07!3;UBERON:0002116!1.71e-07!3;UBERON:0001204!1.71e-07!3;UBERON:0001168!1.71e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.55e-50,9;UBERON:0004808,7.55e-50,9;UBERON:0001277,7.55e-50,9;UBERON:0000485,1.25e-40,11;UBERON:0001242,3.06e-34,13;UBERON:0001262,3.06e-34,13;UBERON:0004786,3.06e-34,13;UBERON:0000344,1.50e-29,15;UBERON:0000160,1.84e-20,31;UBERON:0004923,4.25e-18,24;UBERON:0005409,5.12e-13,47;UBERON:0003929,5.23e-11,55;UBERON:0000490,6.37e-09,66;UBERON:0005911,1.81e-08,69 | |||
|phase1_expression=0,4.18770489167233,2.27499619694768,8.77146212789807,5.50985302940982,1.51091344720701,1.16806320297763,0.774739940649458,0.140788722151667,0,0,0,2.56801094896809,1.31130603628496,0,0,0,0,0,0,0,0,0,0.47997726838022,0,2.29692785646008,1.29228598847722,1.29282739611533,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,2.88851619751275,1.99481574430191,5.10423390655923,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0.128867461322093,0,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,1.08069024937347,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr16:91548532..91548555,- | |||
}} |
Revision as of 13:18, 13 September 2013
Short description: | p@chr16:91548532..91548555, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:91548532..91548555, - |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.55e-50 | 9 |
epithelial cell of alimentary canal | 7.55e-50 | 9 |
brush border epithelial cell | 1.54e-33 | 6 |
gut absorptive cell | 1.54e-33 | 6 |
enterocyte | 1.54e-33 | 6 |
epithelial cell | 1.04e-30 | 25 |
endo-epithelial cell | 1.50e-29 | 15 |
columnar/cuboidal epithelial cell | 1.02e-28 | 7 |
endodermal cell | 6.40e-22 | 20 |
intestinal crypt stem cell | 9.33e-18 | 3 |
M cell of gut | 8.11e-17 | 3 |
defensive cell | 1.60e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.55e-50 | 9 |
gastrointestinal system epithelium | 7.55e-50 | 9 |
intestinal epithelium | 7.55e-50 | 9 |
simple columnar epithelium | 1.25e-40 | 11 |
intestinal mucosa | 3.06e-34 | 13 |
wall of intestine | 3.06e-34 | 13 |
gastrointestinal system mucosa | 3.06e-34 | 13 |
mucosa | 1.50e-29 | 15 |
intestine | 1.84e-20 | 31 |
organ component layer | 4.25e-18 | 24 |
gastrointestinal system | 5.12e-13 | 47 |
gut epithelium | 5.23e-11 | 55 |
unilaminar epithelium | 6.37e-09 | 66 |
endo-epithelium | 1.81e-08 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.