FFCP PHASE1:Mm9::chr16:6348794..6348815,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=268859|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=-313bp_to_uc007yce.2_5end|description=CAGE_peak_9_at_Rbfox1_5end|id=chr16:6348794..6348815,+|ontology_enrichment_celltype=CL:0000117!3.10e-18!23;CL:0000337!3.10e-18!23;CL:0000540!6.22e-11!33;CL:0000047!6.22e-11!33;CL:0000031!6.22e-11!33;CL:0000404!6.22e-11!33;CL:0000393!5.54e-08!39;CL:0000211!5.54e-08!39;CL:0002319!4.75e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,8.23e-25,23;CL:0000337,8.23e-25,23;CL:0000540,2.68e-15,33;CL:0000047,2.68e-15,33;CL:0000031,2.68e-15,33;CL:0000404,2.68e-15,33;CL:0000393,5.60e-12,39;CL:0000211,5.60e-12,39;CL:0002319,2.67e-10,43;CL:0000221,6.26e-10,44;CL:0000133,6.26e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.83e-25!34;UBERON:0001049!2.69e-23!52;UBERON:0005068!2.69e-23!52;UBERON:0006241!2.69e-23!52;UBERON:0007135!2.69e-23!52;UBERON:0002346!5.43e-23!71;UBERON:0003075!5.43e-23!71;UBERON:0007284!5.43e-23!71;UBERON:0000955!2.35e-21!50;UBERON:0006238!2.35e-21!50;UBERON:0002791!6.94e-21!29;UBERON:0003528!6.94e-21!29;UBERON:0001893!6.94e-21!29;UBERON:0002616!7.49e-21!49;UBERON:0001017!1.56e-20!73;UBERON:0005743!1.56e-20!73;UBERON:0000073!3.06e-20!75;UBERON:0001016!3.06e-20!75;UBERON:0000033!3.29e-19!63;UBERON:0004121!2.93e-17!102;UBERON:0000924!2.93e-17!102;UBERON:0006601!2.93e-17!102;UBERON:0003056!1.52e-16!49;UBERON:0003080!2.88e-16!40;UBERON:0002780!1.60e-15!39;UBERON:0001890!1.60e-15!39;UBERON:0006240!1.60e-15!39;UBERON:0000956!4.69e-15!21;UBERON:0001869!4.69e-15!21;UBERON:0000203!4.69e-15!21;UBERON:0007811!9.15e-13!86;UBERON:0002619!7.27e-12!17;UBERON:0002021!5.04e-11!10;UBERON:0000411!5.04e-11!10;UBERON:0001950!5.04e-11!10;UBERON:0000153!2.60e-10!94;UBERON:0003076!9.27e-08!12;UBERON:0003057!9.27e-08!12;UBERON:0002420!5.42e-07!8;UBERON:0007245!5.42e-07!8;UBERON:0010009!5.42e-07!8;UBERON:0010011!5.42e-07!8;UBERON:0000454!5.42e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.74e-39,54;UBERON:0001049,2.93e-36,52;UBERON:0005068,2.93e-36,52;UBERON:0006241,2.93e-36,52;UBERON:0007135,2.93e-36,52;UBERON:0002020,3.35e-36,34;UBERON:0001017,3.71e-32,73;UBERON:0001016,6.04e-31,75;UBERON:0003528,1.46e-29,29;UBERON:0002791,1.46e-29,29;UBERON:0001893,1.46e-29,29;UBERON:0002616,1.17e-28,46;UBERON:0000955,7.95e-28,47;UBERON:0006238,7.95e-28,47;UBERON:0002346,3.25e-27,64;UBERON:0003075,3.25e-27,64;UBERON:0007284,3.25e-27,64;UBERON:0003080,6.53e-25,40;UBERON:0002780,9.15e-24,39;UBERON:0001890,9.15e-24,39;UBERON:0006240,9.15e-24,39;UBERON:0010371,2.11e-22,73;UBERON:0004121,1.17e-21,95;UBERON:0000924,1.17e-21,95;UBERON:0006601,1.17e-21,95;UBERON:0000956,9.70e-21,21;UBERON:0001869,9.70e-21,21;UBERON:0000203,9.70e-21,21;UBERON:0003056,1.11e-18,49;UBERON:0002619,6.06e-16,17;UBERON:0002021,6.64e-16,10;UBERON:0000411,6.64e-16,10;UBERON:0001950,6.64e-16,10;UBERON:0010314,2.16e-15,92;UBERON:0003076,1.48e-11,12;UBERON:0003057,1.48e-11,12;UBERON:0000025,2.74e-10,114;UBERON:0002420,8.36e-10,8;UBERON:0007245,8.36e-10,8;UBERON:0010009,8.36e-10,8;UBERON:0010011,8.36e-10,8;UBERON:0000454,8.36e-10,8;UBERON:0004111,6.43e-09,122;UBERON:0002240,8.97e-09,6;UBERON:0005174,8.97e-09,6;UBERON:0001137,8.97e-09,6;UBERON:0001948,1.14e-07,5;UBERON:0002315,1.14e-07,5;UBERON:0000369,4.89e-07,5;UBERON:0002435,4.89e-07,5;UBERON:0000204,4.89e-07,5;UBERON:0010082,4.89e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,3.21437798156281,2.8351247049655,4.6271491497304,4.28476476605705,4.41737081903227,3.30725157880376,2.20444583341944,0.919218786610021,5.50579404996943,3.31987079021488,4.91540906419979,3.16527090552465,2.56165402086747,4.68822033501084,3.90856198601933,1.12552522006336,2.13917546887534,6.77645746589436,4.6982654663704,3.16879057903011,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,52.4077626650669,41.889341362691,0,0,0,0,3.89455662452539,3.66000482254901,3.76963056338593,6.95297280769106,5.62574006126727,4.36354893575076,4.54275536589721,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.612328492361951,0.384341160854549,0.468508622798644,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,2.73376933133365,7.10041825417063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.44292937929755,0,0,0,0,0,0,0,0,4.49541651965817,5.15731421005694,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0,0,19.2015626489803,12.4287813856938,13.7494923225455,7.90524638780963,4.11049511862385,11.3309084608455,8.77529250301348,11.7083512838297,5.89085131679466,9.31968561153276,0,0,0.853668028770671,0,0.419226325255965,1.10306105070008,1.77797382241292,1.44224540067226,2.24643446714271,1.76888048234658,2.78827229879264,0.377252682772152,0.842773567228942,1.28050304809739,0.976402972245426,1.42888107384922,0.927074607558844,1.15745532278223,2.06042950401653,1.03039244094078,2.05721551431249,1.4198064492747,0.715308569841963,1.45346416632329,1.97629698872194,0.846146078916765,1.09756783723664,1.05227884575137,1.35804113845862,0,1.06771516311757,0.788035859004508,0.818462086339379,0.464810523557898,0.964533054905707,0.999242311751784,1.40358965067245,1.28922632428979,0.57386499620653,0,0|short_description=p9@Rbfox1}} | ||
|EntrezGene=268859 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt= | |||
|association_with_transcript=-313bp_to_uc007yce.2_5end | |||
|description=CAGE_peak_9_at_Rbfox1_5end | |||
|id=chr16:6348794..6348815,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.10e-18!23;CL:0000337!3.10e-18!23;CL:0000540!6.22e-11!33;CL:0000047!6.22e-11!33;CL:0000031!6.22e-11!33;CL:0000404!6.22e-11!33;CL:0000393!5.54e-08!39;CL:0000211!5.54e-08!39;CL:0002319!4.75e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.23e-25,23;CL:0000337,8.23e-25,23;CL:0000540,2.68e-15,33;CL:0000047,2.68e-15,33;CL:0000031,2.68e-15,33;CL:0000404,2.68e-15,33;CL:0000393,5.60e-12,39;CL:0000211,5.60e-12,39;CL:0002319,2.67e-10,43;CL:0000221,6.26e-10,44;CL:0000133,6.26e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.83e-25!34;UBERON:0001049!2.69e-23!52;UBERON:0005068!2.69e-23!52;UBERON:0006241!2.69e-23!52;UBERON:0007135!2.69e-23!52;UBERON:0002346!5.43e-23!71;UBERON:0003075!5.43e-23!71;UBERON:0007284!5.43e-23!71;UBERON:0000955!2.35e-21!50;UBERON:0006238!2.35e-21!50;UBERON:0002791!6.94e-21!29;UBERON:0003528!6.94e-21!29;UBERON:0001893!6.94e-21!29;UBERON:0002616!7.49e-21!49;UBERON:0001017!1.56e-20!73;UBERON:0005743!1.56e-20!73;UBERON:0000073!3.06e-20!75;UBERON:0001016!3.06e-20!75;UBERON:0000033!3.29e-19!63;UBERON:0004121!2.93e-17!102;UBERON:0000924!2.93e-17!102;UBERON:0006601!2.93e-17!102;UBERON:0003056!1.52e-16!49;UBERON:0003080!2.88e-16!40;UBERON:0002780!1.60e-15!39;UBERON:0001890!1.60e-15!39;UBERON:0006240!1.60e-15!39;UBERON:0000956!4.69e-15!21;UBERON:0001869!4.69e-15!21;UBERON:0000203!4.69e-15!21;UBERON:0007811!9.15e-13!86;UBERON:0002619!7.27e-12!17;UBERON:0002021!5.04e-11!10;UBERON:0000411!5.04e-11!10;UBERON:0001950!5.04e-11!10;UBERON:0000153!2.60e-10!94;UBERON:0003076!9.27e-08!12;UBERON:0003057!9.27e-08!12;UBERON:0002420!5.42e-07!8;UBERON:0007245!5.42e-07!8;UBERON:0010009!5.42e-07!8;UBERON:0010011!5.42e-07!8;UBERON:0000454!5.42e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.74e-39,54;UBERON:0001049,2.93e-36,52;UBERON:0005068,2.93e-36,52;UBERON:0006241,2.93e-36,52;UBERON:0007135,2.93e-36,52;UBERON:0002020,3.35e-36,34;UBERON:0001017,3.71e-32,73;UBERON:0001016,6.04e-31,75;UBERON:0003528,1.46e-29,29;UBERON:0002791,1.46e-29,29;UBERON:0001893,1.46e-29,29;UBERON:0002616,1.17e-28,46;UBERON:0000955,7.95e-28,47;UBERON:0006238,7.95e-28,47;UBERON:0002346,3.25e-27,64;UBERON:0003075,3.25e-27,64;UBERON:0007284,3.25e-27,64;UBERON:0003080,6.53e-25,40;UBERON:0002780,9.15e-24,39;UBERON:0001890,9.15e-24,39;UBERON:0006240,9.15e-24,39;UBERON:0010371,2.11e-22,73;UBERON:0004121,1.17e-21,95;UBERON:0000924,1.17e-21,95;UBERON:0006601,1.17e-21,95;UBERON:0000956,9.70e-21,21;UBERON:0001869,9.70e-21,21;UBERON:0000203,9.70e-21,21;UBERON:0003056,1.11e-18,49;UBERON:0002619,6.06e-16,17;UBERON:0002021,6.64e-16,10;UBERON:0000411,6.64e-16,10;UBERON:0001950,6.64e-16,10;UBERON:0010314,2.16e-15,92;UBERON:0003076,1.48e-11,12;UBERON:0003057,1.48e-11,12;UBERON:0000025,2.74e-10,114;UBERON:0002420,8.36e-10,8;UBERON:0007245,8.36e-10,8;UBERON:0010009,8.36e-10,8;UBERON:0010011,8.36e-10,8;UBERON:0000454,8.36e-10,8;UBERON:0004111,6.43e-09,122;UBERON:0002240,8.97e-09,6;UBERON:0005174,8.97e-09,6;UBERON:0001137,8.97e-09,6;UBERON:0001948,1.14e-07,5;UBERON:0002315,1.14e-07,5;UBERON:0000369,4.89e-07,5;UBERON:0002435,4.89e-07,5;UBERON:0000204,4.89e-07,5;UBERON:0010082,4.89e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,3.21437798156281,2.8351247049655,4.6271491497304,4.28476476605705,4.41737081903227,3.30725157880376,2.20444583341944,0.919218786610021,5.50579404996943,3.31987079021488,4.91540906419979,3.16527090552465,2.56165402086747,4.68822033501084,3.90856198601933,1.12552522006336,2.13917546887534,6.77645746589436,4.6982654663704,3.16879057903011,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,52.4077626650669,41.889341362691,0,0,0,0,3.89455662452539,3.66000482254901,3.76963056338593,6.95297280769106,5.62574006126727,4.36354893575076,4.54275536589721,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.612328492361951,0.384341160854549,0.468508622798644,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,2.73376933133365,7.10041825417063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.44292937929755,0,0,0,0,0,0,0,0,4.49541651965817,5.15731421005694,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0,0,19.2015626489803,12.4287813856938,13.7494923225455,7.90524638780963,4.11049511862385,11.3309084608455,8.77529250301348,11.7083512838297,5.89085131679466,9.31968561153276,0,0,0.853668028770671,0,0.419226325255965,1.10306105070008,1.77797382241292,1.44224540067226,2.24643446714271,1.76888048234658,2.78827229879264,0.377252682772152,0.842773567228942,1.28050304809739,0.976402972245426,1.42888107384922,0.927074607558844,1.15745532278223,2.06042950401653,1.03039244094078,2.05721551431249,1.4198064492747,0.715308569841963,1.45346416632329,1.97629698872194,0.846146078916765,1.09756783723664,1.05227884575137,1.35804113845862,0,1.06771516311757,0.788035859004508,0.818462086339379,0.464810523557898,0.964533054905707,0.999242311751784,1.40358965067245,1.28922632428979,0.57386499620653,0,0 | |||
|short_description=p9@Rbfox1 | |||
}} |
Revision as of 12:59, 13 September 2013
Short description: | p9@Rbfox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Rbfox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -313bp_to_uc007yce.2_5end |
EntrezGene: | Rbfox1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.23e-25 | 23 |
neuroblast (sensu Vertebrata) | 8.23e-25 | 23 |
neuron | 2.68e-15 | 33 |
neuronal stem cell | 2.68e-15 | 33 |
neuroblast | 2.68e-15 | 33 |
electrically signaling cell | 2.68e-15 | 33 |
electrically responsive cell | 5.60e-12 | 39 |
electrically active cell | 5.60e-12 | 39 |
neural cell | 2.67e-10 | 43 |
ectodermal cell | 6.26e-10 | 44 |
neurectodermal cell | 6.26e-10 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.