FFCP PHASE1:Hg19::chr5:109025976..109026006,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4124|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=6824|TSSclassifier=S|UniProt=Q16706|association_with_transcript=-109bp_to_U31520_5end|description=CAGE_peak_12_at_MAN2A1_5end|id=chr5:109025976..109026006,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000791;4.95e-13;18!CL:0000789;4.95e-13;18!CL:0002419;4.95e-13;18!CL:0000084;2.38e-09;25!CL:0000625;2.64e-08;11!CL:0000624;3.15e-07;6|ontology_enrichment_celltype_v019_2=CL:0000791,4.37e-13,18;CL:0000789,4.37e-13,18;CL:0002420,4.37e-13,18;CL:0002419,4.37e-13,18;CL:0000790,4.37e-13,18;CL:0000084,2.18e-09,25;CL:0000827,2.18e-09,25;CL:0000625,2.58e-08,11;CL:0000838,3.59e-08,52;CL:0000542,5.28e-08,53;CL:0000051,5.28e-08,53;CL:0000624,2.78e-07,6|ontology_enrichment_development_v019=CL:0000790;4.95e-13;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;2.52e-11;1!DOID:4549;2.52e-11;1!DOID:5861;2.52e-11;1!DOID:6496;2.52e-11;1|ontology_enrichment_disease_v019_2=DOID:3371,2.53e-11,1;DOID:4549,2.53e-11,1;DOID:5861,2.53e-11,1;DOID:6496,2.53e-11,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002108;7.00e-18;4!UBERON:0000160;1.01e-08;17!UBERON:0005409;7.41e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.05e-17,4;UBERON:0000160,1.07e-08,17|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,1.34465029290355,0,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.547497700291537,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0.56738522469114,0,0.502497330513487,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0,0.393419540227666,1.17903228824749,1.64481199199607,0,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0,1.62482318259009,0.25618263945135,0.390178042679635,0,0,0.289803085735052,0.593146252648242,0.267540828089713,0,0.113309342697566,0,1.71813722741315,0.253019692019503,0.318565414324097,1.30216690771284,0,0,0.76791966692651,0,0.236777252044017,0.821127996921047,0.80642697289893,1.33720097891754,1.30341963494519,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,0.261958150995425,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0,0,0,0.323745888736263,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0.213557388818567,0,0.600182192168805,0.412210116953756,0.257640540045629,0,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,0,0.710019185033229,0.201504196455281,0,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0.245976877086227,0.343135620597051,0.109750285408626,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0,0.290633938513962,0,0.985326475791887,0.44024217006613,0.621984346622316,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.904318131178758,0,0.499864955910285,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0.394061520403854,0.431255149719035,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0,0,0,0,0,0,0.434418072340414,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0.276242966807689,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0.256450125116389,0,0.976135183992909,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.30347334256665,0,0.94443704049192,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0.731140468893853,0,0.409499734223957,0.282810863907425,0,0.551365343546124,0.663438975241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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6824 | |||
|TSSclassifier=S | |||
|UniProt=Q16706 | |||
|association_with_transcript=-109bp_to_U31520_5end | |||
|description=CAGE_peak_12_at_MAN2A1_5end | |||
|id=chr5:109025976..109026006,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.95e-13;18!CL:0000789;4.95e-13;18!CL:0002419;4.95e-13;18!CL:0000084;2.38e-09;25!CL:0000625;2.64e-08;11!CL:0000624;3.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.37e-13,18;CL:0000789,4.37e-13,18;CL:0002420,4.37e-13,18;CL:0002419,4.37e-13,18;CL:0000790,4.37e-13,18;CL:0000084,2.18e-09,25;CL:0000827,2.18e-09,25;CL:0000625,2.58e-08,11;CL:0000838,3.59e-08,52;CL:0000542,5.28e-08,53;CL:0000051,5.28e-08,53;CL:0000624,2.78e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.95e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.52e-11;1!DOID:4549;2.52e-11;1!DOID:5861;2.52e-11;1!DOID:6496;2.52e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.53e-11,1;DOID:4549,2.53e-11,1;DOID:5861,2.53e-11,1;DOID:6496,2.53e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;7.00e-18;4!UBERON:0000160;1.01e-08;17!UBERON:0005409;7.41e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.05e-17,4;UBERON:0000160,1.07e-08,17 | |||
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| |||
|short_description=p12@MAN2A1 | |||
}} |
Revision as of 12:36, 13 September 2013
Short description: | p12@MAN2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_MAN2A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -109bp_to_U31520_5end |
EntrezGene: | MAN2A1 |
HGNC: | 6824 |
UniProt: | Q16706 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.37e-13 | 18 |
alpha-beta T cell | 4.37e-13 | 18 |
immature T cell | 4.37e-13 | 18 |
mature T cell | 4.37e-13 | 18 |
immature alpha-beta T cell | 4.37e-13 | 18 |
T cell | 2.18e-09 | 25 |
pro-T cell | 2.18e-09 | 25 |
CD8-positive, alpha-beta T cell | 2.58e-08 | 11 |
lymphoid lineage restricted progenitor cell | 3.59e-08 | 52 |
lymphocyte | 5.28e-08 | 53 |
common lymphoid progenitor | 5.28e-08 | 53 |
CD4-positive, alpha-beta T cell | 2.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.05e-17 | 4 |
intestine | 1.07e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.53e-11 | 1 |
extraosseous chondrosarcoma | 2.53e-11 | 1 |
myxoid chondrosarcoma | 2.53e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 2.53e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.