FFCP PHASE1:Hg19::chr4:85420434..85420451,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C63|description=CAGE_peak_at_chr4:85420434..85420451,-|id=chr4:85420434..85420451,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002600;4.62e-09;2!CL:0002575;1.03e-08;2!CL:0002602;3.24e-08;2!CL:0000333;3.77e-08;5|ontology_enrichment_celltype_v019_2=CL:0002600,4.02e-09,2;CL:0002575,1.03e-08,2;CL:0002602,2.79e-08,2|ontology_enrichment_development_v019=UBERON:0006241;7.34e-12;3!UBERON:0003057;7.34e-12;3|ontology_enrichment_disease=DOID:171!4.84e-08!10|ontology_enrichment_disease_v019=DOID:171;1.22e-14;10!DOID:169;7.58e-07;6|ontology_enrichment_disease_v019_2=DOID:171,1.22e-14,10;DOID:169,7.59e-07,6|ontology_enrichment_uberon=UBERON:0000073!1.99e-26!94;UBERON:0001016!1.99e-26!94;UBERON:0001017!6.76e-25!82;UBERON:0005743!6.39e-24!86;UBERON:0000955!1.99e-22!69;UBERON:0006238!1.99e-22!69;UBERON:0001049!2.91e-22!57;UBERON:0005068!2.91e-22!57;UBERON:0006241!2.91e-22!57;UBERON:0007135!2.91e-22!57;UBERON:0002616!2.23e-19!59;UBERON:0002346!1.08e-18!90;UBERON:0000924!1.13e-16!173;UBERON:0006601!1.13e-16!173;UBERON:0003075!1.36e-15!86;UBERON:0007284!1.36e-15!86;UBERON:0002780!2.64e-14!41;UBERON:0001890!2.64e-14!41;UBERON:0006240!2.64e-14!41;UBERON:0004121!2.97e-14!169;UBERON:0000153!5.68e-14!129;UBERON:0007811!5.68e-14!129;UBERON:0000033!7.01e-14!123;UBERON:0003080!9.07e-14!42;UBERON:0002020!1.78e-12!34;UBERON:0003528!1.78e-12!34;UBERON:0001893!6.88e-12!34;UBERON:0002791!2.84e-11!33;UBERON:0001869!1.83e-10!32;UBERON:0003076!2.72e-10!15;UBERON:0003057!2.72e-10!15;UBERON:0007023!2.32e-09!115;UBERON:0003056!2.18e-08!61;UBERON:0004732!2.81e-08!13;UBERON:0000956!4.99e-08!25;UBERON:0000203!4.99e-08!25;UBERON:0002298!6.83e-08!8;UBERON:0005174!2.38e-07!5;UBERON:0001137!2.38e-07!5;UBERON:0002619!3.14e-07!22;UBERON:0004733!3.61e-07!12;UBERON:0002028!3.61e-07!12;UBERON:0007277!3.61e-07!12|ontology_enrichment_uberon_v019=UBERON:0002240;7.34e-12;3!UBERON:0005174;7.34e-12;3!UBERON:0001137;7.34e-12;3!UBERON:0011135;8.04e-12;5!UBERON:0002216;8.04e-12;5!UBERON:0011134;8.04e-12;5!UBERON:0002209;8.04e-12;5!UBERON:0002213;8.04e-12;5!UBERON:0007844;8.04e-12;5!UBERON:0011138;8.04e-12;5!UBERON:0001130;8.04e-12;5!UBERON:0001066;8.04e-12;5!UBERON:0001468;8.04e-12;5!UBERON:0002346;4.38e-10;4!UBERON:0000923;4.38e-10;4!UBERON:0010316;4.38e-10;4!UBERON:0005291;4.38e-10;4!UBERON:0002298;5.00e-10;6!UBERON:0003126;2.08e-09;7!UBERON:0001005;2.08e-09;7!UBERON:0003714;2.69e-09;2!UBERON:0003127;4.44e-09;2!UBERON:0002148;1.84e-08;2!UBERON:0006331;1.84e-08;2!UBERON:0009662;1.84e-08;2!UBERON:0006444;3.24e-08;2!UBERON:0001995;3.24e-08;2!UBERON:0004715;3.24e-08;2!UBERON:0000013;3.77e-08;5!UBERON:0002410;3.77e-08;5!UBERON:0002050;3.86e-08;5!UBERON:0005423;3.86e-08;5!UBERON:0000010;1.34e-07;8!UBERON:0004905;2.01e-07;8!UBERON:0000982;2.01e-07;8!UBERON:0004770;2.01e-07;8!UBERON:0004732;4.88e-07;13!UBERON:0000125;8.27e-07;9!UBERON:0002308;8.27e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0011135,6.19e-12,5;UBERON:0002216,6.19e-12,5;UBERON:0011134,6.19e-12,5;UBERON:0002209,6.19e-12,5;UBERON:0002213,6.19e-12,5;UBERON:0005856,6.19e-12,5;UBERON:0005866,6.19e-12,5;UBERON:0005863,6.19e-12,5;UBERON:0007844,6.19e-12,5;UBERON:0011138,6.19e-12,5;UBERON:0001130,6.19e-12,5;UBERON:0001066,6.19e-12,5;UBERON:0001468,6.19e-12,5;UBERON:0002240,6.69e-12,3;UBERON:0005174,6.69e-12,3;UBERON:0001137,6.69e-12,3;UBERON:0003076,3.50e-11,15;UBERON:0003057,3.50e-11,15;UBERON:0002298,5.94e-10,6;UBERON:0003126,2.04e-09,7;UBERON:0001005,2.04e-09,7;UBERON:0003714,2.70e-09,2;UBERON:0001016,2.80e-09,89;UBERON:0003127,4.91e-09,2;UBERON:0011216,6.79e-09,223;UBERON:0002148,2.49e-08,2;UBERON:0006331,2.49e-08,2;UBERON:0009662,2.49e-08,2;UBERON:0006444,2.79e-08,2;UBERON:0001995,2.79e-08,2;UBERON:0004715,2.79e-08,2;UBERON:0000013,3.77e-08,5;UBERON:0002410,3.77e-08,5;UBERON:0000010,1.34e-07,8;UBERON:0004905,1.72e-07,8;UBERON:0000982,1.72e-07,8;UBERON:0004770,1.72e-07,8;UBERON:0004732,5.37e-07,13;UBERON:0000125,8.15e-07,9;UBERON:0002308,8.15e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.98026164736075,1.32558950291166,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0.286235987131057,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0.149448680551801,0,0,0,0.816616685019573,0.491337269247072,1.65321249881225,0,0,0,0,0,0.125118519871964,1.38532057742091,0.877955241761676,0,0,0,0,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.51830527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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr4:85420434..85420451,- | |||
|id=chr4:85420434..85420451,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002600;4.62e-09;2!CL:0002575;1.03e-08;2!CL:0002602;3.24e-08;2!CL:0000333;3.77e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,4.02e-09,2;CL:0002575,1.03e-08,2;CL:0002602,2.79e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.34e-12;3!UBERON:0003057;7.34e-12;3 | |||
|ontology_enrichment_disease=DOID:171!4.84e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.22e-14;10!DOID:169;7.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.22e-14,10;DOID:169,7.59e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.99e-26!94;UBERON:0001016!1.99e-26!94;UBERON:0001017!6.76e-25!82;UBERON:0005743!6.39e-24!86;UBERON:0000955!1.99e-22!69;UBERON:0006238!1.99e-22!69;UBERON:0001049!2.91e-22!57;UBERON:0005068!2.91e-22!57;UBERON:0006241!2.91e-22!57;UBERON:0007135!2.91e-22!57;UBERON:0002616!2.23e-19!59;UBERON:0002346!1.08e-18!90;UBERON:0000924!1.13e-16!173;UBERON:0006601!1.13e-16!173;UBERON:0003075!1.36e-15!86;UBERON:0007284!1.36e-15!86;UBERON:0002780!2.64e-14!41;UBERON:0001890!2.64e-14!41;UBERON:0006240!2.64e-14!41;UBERON:0004121!2.97e-14!169;UBERON:0000153!5.68e-14!129;UBERON:0007811!5.68e-14!129;UBERON:0000033!7.01e-14!123;UBERON:0003080!9.07e-14!42;UBERON:0002020!1.78e-12!34;UBERON:0003528!1.78e-12!34;UBERON:0001893!6.88e-12!34;UBERON:0002791!2.84e-11!33;UBERON:0001869!1.83e-10!32;UBERON:0003076!2.72e-10!15;UBERON:0003057!2.72e-10!15;UBERON:0007023!2.32e-09!115;UBERON:0003056!2.18e-08!61;UBERON:0004732!2.81e-08!13;UBERON:0000956!4.99e-08!25;UBERON:0000203!4.99e-08!25;UBERON:0002298!6.83e-08!8;UBERON:0005174!2.38e-07!5;UBERON:0001137!2.38e-07!5;UBERON:0002619!3.14e-07!22;UBERON:0004733!3.61e-07!12;UBERON:0002028!3.61e-07!12;UBERON:0007277!3.61e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.34e-12;3!UBERON:0005174;7.34e-12;3!UBERON:0001137;7.34e-12;3!UBERON:0011135;8.04e-12;5!UBERON:0002216;8.04e-12;5!UBERON:0011134;8.04e-12;5!UBERON:0002209;8.04e-12;5!UBERON:0002213;8.04e-12;5!UBERON:0007844;8.04e-12;5!UBERON:0011138;8.04e-12;5!UBERON:0001130;8.04e-12;5!UBERON:0001066;8.04e-12;5!UBERON:0001468;8.04e-12;5!UBERON:0002346;4.38e-10;4!UBERON:0000923;4.38e-10;4!UBERON:0010316;4.38e-10;4!UBERON:0005291;4.38e-10;4!UBERON:0002298;5.00e-10;6!UBERON:0003126;2.08e-09;7!UBERON:0001005;2.08e-09;7!UBERON:0003714;2.69e-09;2!UBERON:0003127;4.44e-09;2!UBERON:0002148;1.84e-08;2!UBERON:0006331;1.84e-08;2!UBERON:0009662;1.84e-08;2!UBERON:0006444;3.24e-08;2!UBERON:0001995;3.24e-08;2!UBERON:0004715;3.24e-08;2!UBERON:0000013;3.77e-08;5!UBERON:0002410;3.77e-08;5!UBERON:0002050;3.86e-08;5!UBERON:0005423;3.86e-08;5!UBERON:0000010;1.34e-07;8!UBERON:0004905;2.01e-07;8!UBERON:0000982;2.01e-07;8!UBERON:0004770;2.01e-07;8!UBERON:0004732;4.88e-07;13!UBERON:0000125;8.27e-07;9!UBERON:0002308;8.27e-07;9 | |||
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|short_description=p@chr4:85420434..85420451,- | |||
}} |
Revision as of 12:06, 13 September 2013
Short description: | p@chr4:85420434..85420451, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:85420434..85420451, - |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 4.02e-09 | 2 |
central nervous system pericyte | 1.03e-08 | 2 |
annulus pulposus cell | 2.79e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.22e-14 | 10 |
neuroendocrine tumor | 7.59e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.