FFCP PHASE1:Hg19::chr4:83602084..83602095,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79966|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=21088|TSSclassifier=W|UniProt=Q86SK9|association_with_transcript=-165bp_to_AL831891_5end|coexpression_cluster_id=C61|description=CAGE_peak_23_at_SCD5_5end|id=chr4:83602084..83602095,-|ontology_enrichment_celltype=CL:0000453!3.57e-22!5;CL:0000990!1.34e-12!8;CL:0000451!2.08e-10!10|ontology_enrichment_celltype_v019=CL:0000453;2.51e-53;5!CL:0000990;2.87e-30;8!CL:0000451;5.16e-25;10|ontology_enrichment_celltype_v019_2=CL:0000453,2.87e-53,5;CL:0000990,3.09e-30,8;CL:0000451,5.49e-25,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060060!6.06e-13!1;DOID:0060061!6.06e-13!1;DOID:8691!6.06e-13!1;DOID:0060058!6.09e-11!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.31e-16!7;UBERON:0002372!3.33e-13!1;UBERON:0001961!3.33e-13!1;UBERON:0001744!3.33e-13!1;UBERON:0001735!3.33e-13!1;UBERON:0002370!5.08e-13!4;UBERON:0005058!5.08e-13!4;UBERON:0009113!5.08e-13!4;UBERON:0003295!5.08e-13!4;UBERON:0005562!5.08e-13!4;UBERON:0001042!2.22e-11!10;UBERON:0009145!2.22e-11!10;UBERON:0000974!2.38e-11!10;UBERON:0006562!2.14e-10!11;UBERON:0009722!2.59e-10!11;UBERON:0007690!2.59e-10!11;UBERON:0003351!5.56e-09!6;UBERON:0008814!1.07e-07!15;UBERON:0005057!1.92e-07!26;UBERON:0000341!3.48e-07!2|ontology_enrichment_uberon_v019=UBERON:0002370;5.96e-34;2!UBERON:0005058;5.96e-34;2!UBERON:0009113;5.96e-34;2!UBERON:0004177;1.71e-14;5!UBERON:0005057;1.71e-14;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.69e-18,4;UBERON:0005058,8.69e-18,4;UBERON:0009113,8.69e-18,4;UBERON:0003295,8.69e-18,4;UBERON:0005562,8.69e-18,4;UBERON:0003351,2.45e-12,6;UBERON:0004177,8.99e-11,7;UBERON:0005057,8.99e-11,7;UBERON:0000974,6.13e-08,10;UBERON:0003408,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20983142705737,0.265729680626726,1.30852315404675,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,1.55013383606415,0.806971285846153,0,0.190941474834495,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p23@SCD5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79966 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21088 | |||
|TSSclassifier=W | |||
|UniProt=Q86SK9 | |||
|association_with_transcript=-165bp_to_AL831891_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_23_at_SCD5_5end | |||
|id=chr4:83602084..83602095,- | |||
|ontology_enrichment_celltype=CL:0000453!3.57e-22!5;CL:0000990!1.34e-12!8;CL:0000451!2.08e-10!10 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.51e-53;5!CL:0000990;2.87e-30;8!CL:0000451;5.16e-25;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.87e-53,5;CL:0000990,3.09e-30,8;CL:0000451,5.49e-25,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!6.06e-13!1;DOID:0060061!6.06e-13!1;DOID:8691!6.06e-13!1;DOID:0060058!6.09e-11!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.31e-16!7;UBERON:0002372!3.33e-13!1;UBERON:0001961!3.33e-13!1;UBERON:0001744!3.33e-13!1;UBERON:0001735!3.33e-13!1;UBERON:0002370!5.08e-13!4;UBERON:0005058!5.08e-13!4;UBERON:0009113!5.08e-13!4;UBERON:0003295!5.08e-13!4;UBERON:0005562!5.08e-13!4;UBERON:0001042!2.22e-11!10;UBERON:0009145!2.22e-11!10;UBERON:0000974!2.38e-11!10;UBERON:0006562!2.14e-10!11;UBERON:0009722!2.59e-10!11;UBERON:0007690!2.59e-10!11;UBERON:0003351!5.56e-09!6;UBERON:0008814!1.07e-07!15;UBERON:0005057!1.92e-07!26;UBERON:0000341!3.48e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.96e-34;2!UBERON:0005058;5.96e-34;2!UBERON:0009113;5.96e-34;2!UBERON:0004177;1.71e-14;5!UBERON:0005057;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.69e-18,4;UBERON:0005058,8.69e-18,4;UBERON:0009113,8.69e-18,4;UBERON:0003295,8.69e-18,4;UBERON:0005562,8.69e-18,4;UBERON:0003351,2.45e-12,6;UBERON:0004177,8.99e-11,7;UBERON:0005057,8.99e-11,7;UBERON:0000974,6.13e-08,10;UBERON:0003408,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20983142705737,0.265729680626726,1.30852315404675,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,1.55013383606415,0.806971285846153,0,0.190941474834495,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p23@SCD5 | |||
}} |
Revision as of 12:03, 13 September 2013
Short description: | p23@SCD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_SCD5_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -165bp_to_AL831891_5end |
EntrezGene: | SCD5 |
HGNC: | 21088 |
UniProt: | Q86SK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.87e-53 | 5 |
conventional dendritic cell | 3.09e-30 | 8 |
dendritic cell | 5.49e-25 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.69e-18 | 4 |
hemolymphoid system gland | 8.69e-18 | 4 |
thymic region | 8.69e-18 | 4 |
pharyngeal gland | 8.69e-18 | 4 |
thymus primordium | 8.69e-18 | 4 |
pharyngeal epithelium | 2.45e-12 | 6 |
hemopoietic organ | 8.99e-11 | 7 |
immune organ | 8.99e-11 | 7 |
neck | 6.13e-08 | 10 |
gland of gut | 6.13e-08 | 10 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
pharynx | 2.47e-07 | 11 |
entire pharyngeal arch endoderm | 2.47e-07 | 11 |
early pharyngeal endoderm | 2.47e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.