FFCP PHASE1:Mm9::chr15:99500834..99500850,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11419|HGNC=|MCL_coexpression_id=87|UniProt=Q6NXK8|association_with_transcript=-298bp_to_ENSMUST00000023758,NM_009597,uc007xqa.1_5end|description=CAGE_peak_5_at_Accn2_5end|id=chr15:99500834..99500850,+|ontology_enrichment_celltype=CL:0000117!6.96e-24!23;CL:0000337!6.96e-24!23;CL:0000540!2.05e-20!33;CL:0000047!2.05e-20!33;CL:0000031!2.05e-20!33;CL:0000404!2.05e-20!33;CL:0000393!1.09e-15!39;CL:0000211!1.09e-15!39;CL:0000221!6.28e-15!44;CL:0000133!6.28e-15!44;CL:0002319!1.98e-14!43;CL:0000055!4.99e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-37,23;CL:0000337,1.16e-37,23;CL:0000540,4.86e-25,33;CL:0000047,4.86e-25,33;CL:0000031,4.86e-25,33;CL:0000404,4.86e-25,33;CL:0000393,1.43e-20,39;CL:0000211,1.43e-20,39;CL:0002319,2.75e-18,43;CL:0000221,8.84e-18,44;CL:0000133,8.84e-18,44;CL:0002609,1.21e-10,6;CL:0002612,2.57e-10,3;CL:0000120,5.08e-10,3;CL:0002613,8.14e-10,3;CL:0002321,1.05e-09,70;CL:0002611,3.86e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.92e-35!73;UBERON:0005743!1.92e-35!73;UBERON:0000073!5.82e-34!75;UBERON:0001016!5.82e-34!75;UBERON:0001049!1.88e-31!52;UBERON:0005068!1.88e-31!52;UBERON:0006241!1.88e-31!52;UBERON:0007135!1.88e-31!52;UBERON:0000955!3.67e-28!50;UBERON:0006238!3.67e-28!50;UBERON:0002616!1.54e-27!49;UBERON:0002020!7.25e-27!34;UBERON:0000033!1.69e-25!63;UBERON:0004121!4.11e-24!102;UBERON:0000924!4.11e-24!102;UBERON:0006601!4.11e-24!102;UBERON:0003080!3.10e-23!40;UBERON:0002346!1.75e-22!71;UBERON:0003075!1.75e-22!71;UBERON:0007284!1.75e-22!71;UBERON:0002780!2.75e-22!39;UBERON:0001890!2.75e-22!39;UBERON:0006240!2.75e-22!39;UBERON:0002791!4.13e-21!29;UBERON:0003528!4.13e-21!29;UBERON:0001893!4.13e-21!29;UBERON:0003056!8.02e-21!49;UBERON:0007811!4.33e-16!86;UBERON:0000153!4.15e-14!94;UBERON:0000956!1.17e-13!21;UBERON:0001869!1.17e-13!21;UBERON:0000203!1.17e-13!21;UBERON:0002619!2.81e-10!17;UBERON:0002420!8.27e-09!8;UBERON:0007245!8.27e-09!8;UBERON:0010009!8.27e-09!8;UBERON:0010011!8.27e-09!8;UBERON:0000454!8.27e-09!8;UBERON:0003076!1.66e-08!12;UBERON:0003057!1.66e-08!12;UBERON:0002021!3.46e-08!10;UBERON:0000411!3.46e-08!10;UBERON:0001950!3.46e-08!10;UBERON:0002240!6.94e-08!6;UBERON:0005174!6.94e-08!6;UBERON:0001137!6.94e-08!6;UBERON:0000025!2.18e-07!114;UBERON:0001948!4.20e-07!5;UBERON:0002315!4.20e-07!5;UBERON:0004111!5.91e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.79e-40,34;UBERON:0000073,4.35e-36,54;UBERON:0001049,1.02e-34,52;UBERON:0005068,1.02e-34,52;UBERON:0006241,1.02e-34,52;UBERON:0007135,1.02e-34,52;UBERON:0001017,1.78e-32,73;UBERON:0001016,1.85e-31,75;UBERON:0002346,3.31e-27,64;UBERON:0003075,3.31e-27,64;UBERON:0007284,3.31e-27,64;UBERON:0003528,3.36e-27,29;UBERON:0002791,3.36e-27,29;UBERON:0001893,3.36e-27,29;UBERON:0002616,1.50e-24,46;UBERON:0000955,6.29e-24,47;UBERON:0006238,6.29e-24,47;UBERON:0004121,1.19e-23,95;UBERON:0000924,1.19e-23,95;UBERON:0006601,1.19e-23,95;UBERON:0003080,1.67e-23,40;UBERON:0010371,3.46e-23,73;UBERON:0002780,1.10e-21,39;UBERON:0001890,1.10e-21,39;UBERON:0006240,1.10e-21,39;UBERON:0000956,3.61e-19,21;UBERON:0001869,3.61e-19,21;UBERON:0000203,3.61e-19,21;UBERON:0003056,2.13e-18,49;UBERON:0010314,2.82e-17,92;UBERON:0001948,8.01e-16,5;UBERON:0002315,8.01e-16,5;UBERON:0002240,4.00e-13,6;UBERON:0005174,4.00e-13,6;UBERON:0001137,4.00e-13,6;UBERON:0000025,6.97e-13,114;UBERON:0002619,8.30e-12,17;UBERON:0004111,1.12e-11,122;UBERON:0003076,1.49e-11,12;UBERON:0003057,1.49e-11,12;UBERON:0002257,2.57e-10,3;UBERON:0000369,6.74e-10,5;UBERON:0002435,6.74e-10,5;UBERON:0000204,6.74e-10,5;UBERON:0010082,6.74e-10,5;UBERON:0002021,8.79e-10,10;UBERON:0000411,8.79e-10,10;UBERON:0001950,8.79e-10,10;UBERON:0002420,4.61e-09,8;UBERON:0007245,4.61e-09,8;UBERON:0010009,4.61e-09,8;UBERON:0010011,4.61e-09,8;UBERON:0000454,4.61e-09,8;UBERON:0011216,1.38e-08,194;UBERON:0002256,3.86e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,5.28990979272033,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.24427534770173,1.21505344498522,1.26194976810829,3.99911378165325,3.09215957332259,1.71487118900936,1.24599112323707,0.919218786610021,2.20231761998777,0.510749352340751,0.921639199537461,3.16527090552465,3.11057988248193,3.12548022334056,0.558365998002762,0.56276261003168,1.37518422999129,4.71405736757868,3.98640706237488,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,2.93225389538837,0,0,0,0,1.3481157546434,0.915001205637253,2.51308704225729,1.21677024134594,0.255715457330331,1.87009240103604,0.648965052271031,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=11419 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=Q6NXK8 | |||
|association_with_transcript=-298bp_to_ENSMUST00000023758,NM_009597,uc007xqa.1_5end | |||
|description=CAGE_peak_5_at_Accn2_5end | |||
|id=chr15:99500834..99500850,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.96e-24!23;CL:0000337!6.96e-24!23;CL:0000540!2.05e-20!33;CL:0000047!2.05e-20!33;CL:0000031!2.05e-20!33;CL:0000404!2.05e-20!33;CL:0000393!1.09e-15!39;CL:0000211!1.09e-15!39;CL:0000221!6.28e-15!44;CL:0000133!6.28e-15!44;CL:0002319!1.98e-14!43;CL:0000055!4.99e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-37,23;CL:0000337,1.16e-37,23;CL:0000540,4.86e-25,33;CL:0000047,4.86e-25,33;CL:0000031,4.86e-25,33;CL:0000404,4.86e-25,33;CL:0000393,1.43e-20,39;CL:0000211,1.43e-20,39;CL:0002319,2.75e-18,43;CL:0000221,8.84e-18,44;CL:0000133,8.84e-18,44;CL:0002609,1.21e-10,6;CL:0002612,2.57e-10,3;CL:0000120,5.08e-10,3;CL:0002613,8.14e-10,3;CL:0002321,1.05e-09,70;CL:0002611,3.86e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.92e-35!73;UBERON:0005743!1.92e-35!73;UBERON:0000073!5.82e-34!75;UBERON:0001016!5.82e-34!75;UBERON:0001049!1.88e-31!52;UBERON:0005068!1.88e-31!52;UBERON:0006241!1.88e-31!52;UBERON:0007135!1.88e-31!52;UBERON:0000955!3.67e-28!50;UBERON:0006238!3.67e-28!50;UBERON:0002616!1.54e-27!49;UBERON:0002020!7.25e-27!34;UBERON:0000033!1.69e-25!63;UBERON:0004121!4.11e-24!102;UBERON:0000924!4.11e-24!102;UBERON:0006601!4.11e-24!102;UBERON:0003080!3.10e-23!40;UBERON:0002346!1.75e-22!71;UBERON:0003075!1.75e-22!71;UBERON:0007284!1.75e-22!71;UBERON:0002780!2.75e-22!39;UBERON:0001890!2.75e-22!39;UBERON:0006240!2.75e-22!39;UBERON:0002791!4.13e-21!29;UBERON:0003528!4.13e-21!29;UBERON:0001893!4.13e-21!29;UBERON:0003056!8.02e-21!49;UBERON:0007811!4.33e-16!86;UBERON:0000153!4.15e-14!94;UBERON:0000956!1.17e-13!21;UBERON:0001869!1.17e-13!21;UBERON:0000203!1.17e-13!21;UBERON:0002619!2.81e-10!17;UBERON:0002420!8.27e-09!8;UBERON:0007245!8.27e-09!8;UBERON:0010009!8.27e-09!8;UBERON:0010011!8.27e-09!8;UBERON:0000454!8.27e-09!8;UBERON:0003076!1.66e-08!12;UBERON:0003057!1.66e-08!12;UBERON:0002021!3.46e-08!10;UBERON:0000411!3.46e-08!10;UBERON:0001950!3.46e-08!10;UBERON:0002240!6.94e-08!6;UBERON:0005174!6.94e-08!6;UBERON:0001137!6.94e-08!6;UBERON:0000025!2.18e-07!114;UBERON:0001948!4.20e-07!5;UBERON:0002315!4.20e-07!5;UBERON:0004111!5.91e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.79e-40,34;UBERON:0000073,4.35e-36,54;UBERON:0001049,1.02e-34,52;UBERON:0005068,1.02e-34,52;UBERON:0006241,1.02e-34,52;UBERON:0007135,1.02e-34,52;UBERON:0001017,1.78e-32,73;UBERON:0001016,1.85e-31,75;UBERON:0002346,3.31e-27,64;UBERON:0003075,3.31e-27,64;UBERON:0007284,3.31e-27,64;UBERON:0003528,3.36e-27,29;UBERON:0002791,3.36e-27,29;UBERON:0001893,3.36e-27,29;UBERON:0002616,1.50e-24,46;UBERON:0000955,6.29e-24,47;UBERON:0006238,6.29e-24,47;UBERON:0004121,1.19e-23,95;UBERON:0000924,1.19e-23,95;UBERON:0006601,1.19e-23,95;UBERON:0003080,1.67e-23,40;UBERON:0010371,3.46e-23,73;UBERON:0002780,1.10e-21,39;UBERON:0001890,1.10e-21,39;UBERON:0006240,1.10e-21,39;UBERON:0000956,3.61e-19,21;UBERON:0001869,3.61e-19,21;UBERON:0000203,3.61e-19,21;UBERON:0003056,2.13e-18,49;UBERON:0010314,2.82e-17,92;UBERON:0001948,8.01e-16,5;UBERON:0002315,8.01e-16,5;UBERON:0002240,4.00e-13,6;UBERON:0005174,4.00e-13,6;UBERON:0001137,4.00e-13,6;UBERON:0000025,6.97e-13,114;UBERON:0002619,8.30e-12,17;UBERON:0004111,1.12e-11,122;UBERON:0003076,1.49e-11,12;UBERON:0003057,1.49e-11,12;UBERON:0002257,2.57e-10,3;UBERON:0000369,6.74e-10,5;UBERON:0002435,6.74e-10,5;UBERON:0000204,6.74e-10,5;UBERON:0010082,6.74e-10,5;UBERON:0002021,8.79e-10,10;UBERON:0000411,8.79e-10,10;UBERON:0001950,8.79e-10,10;UBERON:0002420,4.61e-09,8;UBERON:0007245,4.61e-09,8;UBERON:0010009,4.61e-09,8;UBERON:0010011,4.61e-09,8;UBERON:0000454,4.61e-09,8;UBERON:0011216,1.38e-08,194;UBERON:0002256,3.86e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,5.28990979272033,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.24427534770173,1.21505344498522,1.26194976810829,3.99911378165325,3.09215957332259,1.71487118900936,1.24599112323707,0.919218786610021,2.20231761998777,0.510749352340751,0.921639199537461,3.16527090552465,3.11057988248193,3.12548022334056,0.558365998002762,0.56276261003168,1.37518422999129,4.71405736757868,3.98640706237488,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,2.93225389538837,0,0,0,0,1.3481157546434,0.915001205637253,2.51308704225729,1.21677024134594,0.255715457330331,1.87009240103604,0.648965052271031,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.05490517932983,0.491804836130026,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,0.460325236507177,1.71868654031819,1.89038500578056,2.74033007908257,1.5107877947794,0,0.900642406448441,0.453142408984205,1.55328093525546,0.103787347584177,0.399024873401031,0.682934423016537,0,0,0.919217542250071,0.44449345560323,0.412070114477788,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.37456602987953,0.192075457214608,0.114870937911227,0,0.463537303779422,0,0,0.294397840268795,0,0,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0.192906610981141,1.24905288968973,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p5@Accn2 | |||
}} |
Revision as of 11:53, 13 September 2013
Short description: | p5@Accn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Accn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -298bp_to_ENSMUST00000023758, NM_009597, uc007xqa.1_5end |
EntrezGene: | Accn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.16e-37 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-37 | 23 |
neuron | 4.86e-25 | 33 |
neuronal stem cell | 4.86e-25 | 33 |
neuroblast | 4.86e-25 | 33 |
electrically signaling cell | 4.86e-25 | 33 |
electrically responsive cell | 1.43e-20 | 39 |
electrically active cell | 1.43e-20 | 39 |
neural cell | 2.75e-18 | 43 |
ectodermal cell | 8.84e-18 | 44 |
neurectodermal cell | 8.84e-18 | 44 |
neuron of cerebral cortex | 1.21e-10 | 6 |
neuron of the ventral spinal cord | 2.57e-10 | 3 |
granule cell | 5.08e-10 | 3 |
striatum neuron | 8.14e-10 | 3 |
embryonic cell | 1.05e-09 | 70 |
neuron of the dorsal spinal cord | 3.86e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.