FFCP PHASE1:Mm9::chr15:97551542..97551601,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19011|HGNC=|MCL_coexpression_id=4|UniProt=Q3V188|association_with_transcript=0bp_to_ENSMUST00000023105,NM_008902,uc007xkw.1,uc007xkx.1_5end|description=CAGE_peak_1_at_Endou_5end|id=chr15:97551542..97551601,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.89e-09!48;UBERON:0004177!3.49e-08!29;UBERON:0002390!9.99e-08!45;UBERON:0003061!9.99e-08!45;UBERON:0003081!1.23e-07!88;UBERON:0002405!2.20e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.76e-22,48;UBERON:0002405,8.76e-22,48;UBERON:0004177,2.34e-20,29;UBERON:0005057,2.34e-20,29;UBERON:0002390,1.01e-19,45;UBERON:0003061,1.01e-19,45;UBERON:0002370,1.98e-16,23;UBERON:0000974,1.98e-16,23;UBERON:0004807,1.98e-16,23;UBERON:0005058,1.98e-16,23;UBERON:0003351,1.98e-16,23;UBERON:0009113,1.98e-16,23;UBERON:0003295,1.98e-16,23;UBERON:0009722,1.98e-16,23;UBERON:0005562,1.98e-16,23;UBERON:0007690,1.98e-16,23;UBERON:0000077,5.04e-16,35;UBERON:0006562,1.38e-15,24;UBERON:0003408,1.38e-15,24;UBERON:0001557,1.38e-15,24;UBERON:0001042,1.38e-15,24;UBERON:0008814,1.38e-15,24;UBERON:0009145,1.38e-15,24;UBERON:0000072,1.95e-13,27;UBERON:0003081,5.82e-12,87;UBERON:0007811,3.63e-09,36;UBERON:0000065,7.49e-09,41;UBERON:0001004,1.50e-08,42;UBERON:0000153,4.14e-07,43;UBERON:0000926,8.61e-07,120;UBERON:0004120,8.61e-07,120;UBERON:0006603,8.61e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,1.99865857089398,0.202475267389826,0,4.41647031501533,4.52477630898938,2.12194825899015,3.23164502574065,3.07801948722744,2.35079810225042,0.799962113967033,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,2.96878087269556,5.43769555659061,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,1.76922110389975,0.323533699894818,0.883366073841574,1.45462575940567,0,0,0,0.510914110417183,0.599075622529601,0,1.01656181658452,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,1.49288364732112,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.351902248327898,0,0,0,0.411564272815887,0,0.702213187313235,1.28673953557358,0.568326998791185,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,1.16765342367169,0.16455984991348,0.820837320395476,0.648550476366846,0.877199924551994,1.09775057645525,0.671032093801859,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.252946148497029,0.147610147979602,0.627994911365499,0.246794327843601,0,0,0,0,0.202860121388503,0.241177159752417,1.01850340712568,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0,0,0.184753190166605,0,0,0.169745085775188,0,2.51259386162724,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0.163863314715738,0.863424909329478,0.433947175744535,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,1.70870880797853,0.206386867963223,0.370389054739423,1.13021074202815,2.1871076435364,2.51655990527175,0.679913719975421,1.25956307091292,0.414599921413271,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,154.845449107807,4.25722952109345,12.3253148597793,44.4329214584059,73.5799719193349,100.53276551932,68.1508198778223,77.2416227123039,95.5142616509477,86.0374847134948,97.1964424719143,133.224922971242,155.574547932413,181.159198381432,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0,0.754505365544305,0.749132059759059,0.832326981263301,0.516919220600519,0.476293691283074,0.231768651889711,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,1.31753132581463,1.01537529470012,0.182927972872773,0.789209134313529,0.679020569229309,1.68342681497322,0.593175090620871,0.985044823755635,0.409231043169689,0.929621047115796,1.15743966588685,0,0.935726433781634,0.859484216193193,0.191288332068843,0,1.15933917810211|short_description=p1@Endou}} | ||
|EntrezGene=19011 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=Q3V188 | |||
|association_with_transcript=0bp_to_ENSMUST00000023105,NM_008902,uc007xkw.1,uc007xkx.1_5end | |||
|description=CAGE_peak_1_at_Endou_5end | |||
|id=chr15:97551542..97551601,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.89e-09!48;UBERON:0004177!3.49e-08!29;UBERON:0002390!9.99e-08!45;UBERON:0003061!9.99e-08!45;UBERON:0003081!1.23e-07!88;UBERON:0002405!2.20e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.76e-22,48;UBERON:0002405,8.76e-22,48;UBERON:0004177,2.34e-20,29;UBERON:0005057,2.34e-20,29;UBERON:0002390,1.01e-19,45;UBERON:0003061,1.01e-19,45;UBERON:0002370,1.98e-16,23;UBERON:0000974,1.98e-16,23;UBERON:0004807,1.98e-16,23;UBERON:0005058,1.98e-16,23;UBERON:0003351,1.98e-16,23;UBERON:0009113,1.98e-16,23;UBERON:0003295,1.98e-16,23;UBERON:0009722,1.98e-16,23;UBERON:0005562,1.98e-16,23;UBERON:0007690,1.98e-16,23;UBERON:0000077,5.04e-16,35;UBERON:0006562,1.38e-15,24;UBERON:0003408,1.38e-15,24;UBERON:0001557,1.38e-15,24;UBERON:0001042,1.38e-15,24;UBERON:0008814,1.38e-15,24;UBERON:0009145,1.38e-15,24;UBERON:0000072,1.95e-13,27;UBERON:0003081,5.82e-12,87;UBERON:0007811,3.63e-09,36;UBERON:0000065,7.49e-09,41;UBERON:0001004,1.50e-08,42;UBERON:0000153,4.14e-07,43;UBERON:0000926,8.61e-07,120;UBERON:0004120,8.61e-07,120;UBERON:0006603,8.61e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,1.99865857089398,0.202475267389826,0,4.41647031501533,4.52477630898938,2.12194825899015,3.23164502574065,3.07801948722744,2.35079810225042,0.799962113967033,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,2.96878087269556,5.43769555659061,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,1.76922110389975,0.323533699894818,0.883366073841574,1.45462575940567,0,0,0,0.510914110417183,0.599075622529601,0,1.01656181658452,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,1.49288364732112,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.351902248327898,0,0,0,0.411564272815887,0,0.702213187313235,1.28673953557358,0.568326998791185,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,1.16765342367169,0.16455984991348,0.820837320395476,0.648550476366846,0.877199924551994,1.09775057645525,0.671032093801859,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.252946148497029,0.147610147979602,0.627994911365499,0.246794327843601,0,0,0,0,0.202860121388503,0.241177159752417,1.01850340712568,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0,0,0.184753190166605,0,0,0.169745085775188,0,2.51259386162724,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0.163863314715738,0.863424909329478,0.433947175744535,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,1.70870880797853,0.206386867963223,0.370389054739423,1.13021074202815,2.1871076435364,2.51655990527175,0.679913719975421,1.25956307091292,0.414599921413271,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,154.845449107807,4.25722952109345,12.3253148597793,44.4329214584059,73.5799719193349,100.53276551932,68.1508198778223,77.2416227123039,95.5142616509477,86.0374847134948,97.1964424719143,133.224922971242,155.574547932413,181.159198381432,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0,0.754505365544305,0.749132059759059,0.832326981263301,0.516919220600519,0.476293691283074,0.231768651889711,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,1.31753132581463,1.01537529470012,0.182927972872773,0.789209134313529,0.679020569229309,1.68342681497322,0.593175090620871,0.985044823755635,0.409231043169689,0.929621047115796,1.15743966588685,0,0.935726433781634,0.859484216193193,0.191288332068843,0,1.15933917810211 | |||
|short_description=p1@Endou | |||
}} |
Revision as of 11:45, 13 September 2013
Short description: | p1@Endou |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Endou_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 0bp_to_ENSMUST00000023105, NM_008902, uc007xkw.1, uc007xkx.1_5end |
EntrezGene: | Endou |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.76e-22 | 48 |
immune system | 8.76e-22 | 48 |
hemopoietic organ | 2.34e-20 | 29 |
immune organ | 2.34e-20 | 29 |
hematopoietic system | 1.01e-19 | 45 |
blood island | 1.01e-19 | 45 |
thymus | 1.98e-16 | 23 |
neck | 1.98e-16 | 23 |
respiratory system epithelium | 1.98e-16 | 23 |
hemolymphoid system gland | 1.98e-16 | 23 |
pharyngeal epithelium | 1.98e-16 | 23 |
thymic region | 1.98e-16 | 23 |
pharyngeal gland | 1.98e-16 | 23 |
entire pharyngeal arch endoderm | 1.98e-16 | 23 |
thymus primordium | 1.98e-16 | 23 |
early pharyngeal endoderm | 1.98e-16 | 23 |
mixed endoderm/mesoderm-derived structure | 5.04e-16 | 35 |
pharynx | 1.38e-15 | 24 |
gland of gut | 1.38e-15 | 24 |
upper respiratory tract | 1.38e-15 | 24 |
chordate pharynx | 1.38e-15 | 24 |
pharyngeal arch system | 1.38e-15 | 24 |
pharyngeal region of foregut | 1.38e-15 | 24 |
segment of respiratory tract | 1.95e-13 | 27 |
lateral plate mesoderm | 5.82e-12 | 87 |
craniocervical region | 3.63e-09 | 36 |
respiratory tract | 7.49e-09 | 41 |
respiratory system | 1.50e-08 | 42 |
anterior region of body | 4.14e-07 | 43 |
mesoderm | 8.61e-07 | 120 |
mesoderm-derived structure | 8.61e-07 | 120 |
presumptive mesoderm | 8.61e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.