FFCP PHASE1:Hg19::chr4:74279324..74279330,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=399|TSSclassifier=S|UniProt=|association_with_transcript=33bp_to_ENST00000504043_5end|coexpression_cluster_id=C5|description=CAGE_peak_35_at_ALB_5end|id=chr4:74279324..74279330,+|ontology_enrichment_celltype=CL:0000181!1.69e-53!12;CL:0000417!1.69e-53!12;CL:0000668!1.69e-53!12;CL:0000414!1.69e-53!12;CL:0000412!1.69e-53!12;CL:0000182!1.69e-53!12;CL:0000223!3.25e-17!59|ontology_enrichment_celltype_v019=CL:0000182;3.04e-49;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.80e-49,12;CL:0000223,1.39e-13,58|ontology_enrichment_development_v019=UBERON:0004161;1.54e-37;11!UBERON:0009497;8.34e-32;13!UBERON:0001041;7.16e-14;30!UBERON:0003104;2.11e-13;31!CL:0000223;3.63e-10;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.02e-55!19;UBERON:0006925!1.02e-55!19;UBERON:0008836!1.02e-55!19;UBERON:0008835!4.99e-48!22;UBERON:0003894!4.99e-48!22;UBERON:0009854!6.56e-46!23;UBERON:0007499!3.52e-42!25;UBERON:0009497!3.52e-42!25;UBERON:0000015!3.52e-42!25;UBERON:0002423!3.52e-42!25;UBERON:0006235!3.52e-42!25;UBERON:0004161!3.52e-42!25;UBERON:0005057!1.57e-40!26;UBERON:0009856!1.57e-40!26;UBERON:0002365!7.17e-34!31;UBERON:0002330!7.17e-34!31;UBERON:0002368!6.54e-30!35;UBERON:0003929!1.79e-28!54;UBERON:0000949!1.84e-28!45;UBERON:0002530!1.93e-21!59;UBERON:0005172!9.99e-19!55;UBERON:0005173!9.99e-19!55;UBERON:0005911!2.36e-18!82;UBERON:0002417!8.51e-17!61;UBERON:0000916!8.51e-17!61;UBERON:0004921!2.47e-13!129;UBERON:0004185!2.47e-13!129;UBERON:0001041!1.71e-12!98;UBERON:0005177!2.41e-11!107;UBERON:0000077!4.09e-11!130;UBERON:0001007!7.13e-11!155;UBERON:0001555!7.13e-11!155;UBERON:0007026!7.13e-11!155;UBERON:0000490!2.18e-10!138;UBERON:0004119!7.40e-10!169;UBERON:0000925!7.40e-10!169;UBERON:0006595!7.40e-10!169;UBERON:0000466!1.86e-09!126;UBERON:0009569!1.28e-08!113;UBERON:0002405!2.27e-08!115;UBERON:0003914!3.28e-08!118;UBERON:0005256!3.53e-08!143;UBERON:0001048!8.68e-07!168|ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.73e-42;25!UBERON:0002365;2.16e-32;31!UBERON:0002330;2.16e-32;31!UBERON:0002368;1.40e-28;33!UBERON:0000949;5.26e-25;43!UBERON:0005172;1.69e-12;52!UBERON:0005173;1.69e-12;52!UBERON:0002417;5.78e-11;58!UBERON:0000916;5.78e-11;58!UBERON:0002530;7.60e-11;57!UBERON:0001007;5.45e-10;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.63e-55,19;UBERON:0006925,3.63e-55,19;UBERON:0008836,3.63e-55,19;UBERON:0008835,1.31e-47,22;UBERON:0003894,1.31e-47,22;UBERON:0009854,1.58e-45,23;UBERON:0007499,7.33e-42,25;UBERON:0009497,7.33e-42,25;UBERON:0000015,7.33e-42,25;UBERON:0002423,7.33e-42,25;UBERON:0006235,7.33e-42,25;UBERON:0004161,7.33e-42,25;UBERON:0009856,3.07e-40,26;UBERON:0002365,1.07e-33,31;UBERON:0002330,1.07e-33,31;UBERON:0002368,8.37e-30,35;UBERON:0000949,4.08e-29,45;UBERON:0003929,3.67e-24,54;UBERON:0005172,3.62e-19,54;UBERON:0005173,3.62e-19,54;UBERON:0002530,1.68e-17,59;UBERON:0002417,3.34e-17,60;UBERON:0000916,3.34e-17,60;UBERON:0005911,1.06e-15,82;UBERON:0005177,1.26e-12,101;UBERON:0001041,1.07e-11,87;UBERON:0004921,1.33e-10,118;UBERON:0009569,5.98e-09,112;UBERON:0003914,1.54e-08,117;UBERON:0001007,1.70e-08,145;UBERON:0001555,1.70e-08,145;UBERON:0007026,1.70e-08,145;UBERON:0000490,2.26e-08,148;UBERON:0005256,3.66e-08,122;UBERON:0004119,1.25e-07,160;UBERON:0000925,1.25e-07,160;UBERON:0006595,1.25e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7457048750563,7.86261773342101,5.90789906681404,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.74277184738353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9937609276745,4.61528806934532,4.11161617510528,0.0984274815147488,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=33bp_to_ENST00000504043_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_35_at_ALB_5end | |||
|id=chr4:74279324..74279330,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.69e-53!12;CL:0000417!1.69e-53!12;CL:0000668!1.69e-53!12;CL:0000414!1.69e-53!12;CL:0000412!1.69e-53!12;CL:0000182!1.69e-53!12;CL:0000223!3.25e-17!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.04e-49;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.80e-49,12;CL:0000223,1.39e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.54e-37;11!UBERON:0009497;8.34e-32;13!UBERON:0001041;7.16e-14;30!UBERON:0003104;2.11e-13;31!CL:0000223;3.63e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.02e-55!19;UBERON:0006925!1.02e-55!19;UBERON:0008836!1.02e-55!19;UBERON:0008835!4.99e-48!22;UBERON:0003894!4.99e-48!22;UBERON:0009854!6.56e-46!23;UBERON:0007499!3.52e-42!25;UBERON:0009497!3.52e-42!25;UBERON:0000015!3.52e-42!25;UBERON:0002423!3.52e-42!25;UBERON:0006235!3.52e-42!25;UBERON:0004161!3.52e-42!25;UBERON:0005057!1.57e-40!26;UBERON:0009856!1.57e-40!26;UBERON:0002365!7.17e-34!31;UBERON:0002330!7.17e-34!31;UBERON:0002368!6.54e-30!35;UBERON:0003929!1.79e-28!54;UBERON:0000949!1.84e-28!45;UBERON:0002530!1.93e-21!59;UBERON:0005172!9.99e-19!55;UBERON:0005173!9.99e-19!55;UBERON:0005911!2.36e-18!82;UBERON:0002417!8.51e-17!61;UBERON:0000916!8.51e-17!61;UBERON:0004921!2.47e-13!129;UBERON:0004185!2.47e-13!129;UBERON:0001041!1.71e-12!98;UBERON:0005177!2.41e-11!107;UBERON:0000077!4.09e-11!130;UBERON:0001007!7.13e-11!155;UBERON:0001555!7.13e-11!155;UBERON:0007026!7.13e-11!155;UBERON:0000490!2.18e-10!138;UBERON:0004119!7.40e-10!169;UBERON:0000925!7.40e-10!169;UBERON:0006595!7.40e-10!169;UBERON:0000466!1.86e-09!126;UBERON:0009569!1.28e-08!113;UBERON:0002405!2.27e-08!115;UBERON:0003914!3.28e-08!118;UBERON:0005256!3.53e-08!143;UBERON:0001048!8.68e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.73e-42;25!UBERON:0002365;2.16e-32;31!UBERON:0002330;2.16e-32;31!UBERON:0002368;1.40e-28;33!UBERON:0000949;5.26e-25;43!UBERON:0005172;1.69e-12;52!UBERON:0005173;1.69e-12;52!UBERON:0002417;5.78e-11;58!UBERON:0000916;5.78e-11;58!UBERON:0002530;7.60e-11;57!UBERON:0001007;5.45e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.63e-55,19;UBERON:0006925,3.63e-55,19;UBERON:0008836,3.63e-55,19;UBERON:0008835,1.31e-47,22;UBERON:0003894,1.31e-47,22;UBERON:0009854,1.58e-45,23;UBERON:0007499,7.33e-42,25;UBERON:0009497,7.33e-42,25;UBERON:0000015,7.33e-42,25;UBERON:0002423,7.33e-42,25;UBERON:0006235,7.33e-42,25;UBERON:0004161,7.33e-42,25;UBERON:0009856,3.07e-40,26;UBERON:0002365,1.07e-33,31;UBERON:0002330,1.07e-33,31;UBERON:0002368,8.37e-30,35;UBERON:0000949,4.08e-29,45;UBERON:0003929,3.67e-24,54;UBERON:0005172,3.62e-19,54;UBERON:0005173,3.62e-19,54;UBERON:0002530,1.68e-17,59;UBERON:0002417,3.34e-17,60;UBERON:0000916,3.34e-17,60;UBERON:0005911,1.06e-15,82;UBERON:0005177,1.26e-12,101;UBERON:0001041,1.07e-11,87;UBERON:0004921,1.33e-10,118;UBERON:0009569,5.98e-09,112;UBERON:0003914,1.54e-08,117;UBERON:0001007,1.70e-08,145;UBERON:0001555,1.70e-08,145;UBERON:0007026,1.70e-08,145;UBERON:0000490,2.26e-08,148;UBERON:0005256,3.66e-08,122;UBERON:0004119,1.25e-07,160;UBERON:0000925,1.25e-07,160;UBERON:0006595,1.25e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7457048750563,7.86261773342101,5.90789906681404,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.74277184738353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9937609276745,4.61528806934532,4.11161617510528,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.06037285229453,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p35@ALB | |||
}} |
Revision as of 11:34, 13 September 2013
Short description: | p35@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_35_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 33bp_to_ENST00000504043_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.80e-49 | 12 |
endodermal cell | 1.39e-13 | 58 |
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