FFCP PHASE1:Hg19::chr4:74279233..74279273,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=399|TSSclassifier=S|UniProt=|association_with_transcript=-17bp_to_ENST00000504043_5end|coexpression_cluster_id=C5|description=CAGE_peak_7_at_ALB_5end|id=chr4:74279233..74279273,+|ontology_enrichment_celltype=CL:0000181!2.50e-30!12;CL:0000417!2.50e-30!12;CL:0000668!2.50e-30!12;CL:0000414!2.50e-30!12;CL:0000412!2.50e-30!12;CL:0000182!2.50e-30!12;CL:0000223!5.50e-09!59|ontology_enrichment_celltype_v019=CL:0000182;2.24e-42;12!CL:0000047;2.97e-08;2|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-42,12;CL:0000223,1.54e-11,58|ontology_enrichment_development_v019=UBERON:0004161;2.56e-32;11!UBERON:0009497;2.25e-27;13!UBERON:0001041;6.72e-12;30!UBERON:0003104;1.68e-11;31!CL:0000223;9.33e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!2.08e-31!23;UBERON:0002107!3.12e-31!19;UBERON:0006925!3.12e-31!19;UBERON:0008836!3.12e-31!19;UBERON:0009856!1.34e-27!26;UBERON:0005057!1.46e-27!26;UBERON:0008835!8.62e-27!22;UBERON:0003894!8.62e-27!22;UBERON:0007499!2.06e-23!25;UBERON:0009497!2.06e-23!25;UBERON:0000015!2.06e-23!25;UBERON:0002423!2.06e-23!25;UBERON:0006235!2.06e-23!25;UBERON:0004161!2.06e-23!25;UBERON:0002365!1.29e-18!31;UBERON:0002330!1.29e-18!31;UBERON:0005172!1.51e-17!55;UBERON:0005173!1.51e-17!55;UBERON:0002368!2.49e-16!35;UBERON:0002417!1.31e-15!61;UBERON:0000916!1.31e-15!61;UBERON:0000949!2.63e-15!45;UBERON:0003929!4.41e-15!54;UBERON:0004921!9.87e-12!129;UBERON:0004185!9.87e-12!129;UBERON:0002530!3.23e-11!59;UBERON:0005177!1.73e-09!107;UBERON:0005911!2.81e-09!82;UBERON:0001007!2.84e-09!155;UBERON:0001555!2.84e-09!155;UBERON:0007026!2.84e-09!155;UBERON:0001301!9.74e-09!1;UBERON:0000077!1.05e-08!130;UBERON:0002146!1.05e-08!1;UBERON:0005623!1.05e-08!1;UBERON:0001154!1.32e-08!1;UBERON:0001153!1.32e-08!1;UBERON:0004119!2.92e-08!169;UBERON:0000925!2.92e-08!169;UBERON:0006595!2.92e-08!169;UBERON:0001041!1.87e-07!98;UBERON:0009569!1.93e-07!113;UBERON:0005409!6.94e-07!35;UBERON:0004907!8.66e-07!5|ontology_enrichment_uberon_v019=UBERON:0002107;2.56e-47;19!UBERON:0006925;2.56e-47;19!UBERON:0002423;7.55e-36;25!UBERON:0002365;1.01e-27;31!UBERON:0002330;1.01e-27;31!UBERON:0002368;1.87e-24;33!UBERON:0000949;2.08e-21;43!UBERON:0005172;9.85e-11;52!UBERON:0005173;9.85e-11;52!UBERON:0002417;1.98e-09;58!UBERON:0000916;1.98e-09;58!UBERON:0002530;2.50e-09;57!UBERON:0001007;1.30e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.56e-47,19;UBERON:0006925,2.56e-47,19;UBERON:0008836,2.56e-47,19;UBERON:0008835,8.38e-41,22;UBERON:0003894,8.38e-41,22;UBERON:0009854,5.23e-39,23;UBERON:0007499,7.55e-36,25;UBERON:0009497,7.55e-36,25;UBERON:0000015,7.55e-36,25;UBERON:0002423,7.55e-36,25;UBERON:0006235,7.55e-36,25;UBERON:0004161,7.55e-36,25;UBERON:0009856,1.89e-34,26;UBERON:0002365,8.27e-29,31;UBERON:0002330,8.27e-29,31;UBERON:0002368,1.88e-25,35;UBERON:0000949,8.65e-25,45;UBERON:0003929,1.54e-20,54;UBERON:0005172,2.79e-16,54;UBERON:0005173,2.79e-16,54;UBERON:0002530,7.63e-15,59;UBERON:0002417,1.38e-14,60;UBERON:0000916,1.38e-14,60;UBERON:0005911,3.07e-13,82;UBERON:0005177,1.42e-10,101;UBERON:0001041,7.76e-10,87;UBERON:0004921,7.76e-09,118;UBERON:0009569,1.81e-07,112;UBERON:0003914,4.08e-07,117;UBERON:0001007,5.07e-07,145;UBERON:0001555,5.07e-07,145;UBERON:0007026,5.07e-07,145;UBERON:0000490,6.50e-07,148;UBERON:0005256,8.62e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,226.891512331077,93.3685855843745,33.0842347741586,0,4.91953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,58.4242536042585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.6619664427641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000504043_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_ALB_5end | |||
|id=chr4:74279233..74279273,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.50e-30!12;CL:0000417!2.50e-30!12;CL:0000668!2.50e-30!12;CL:0000414!2.50e-30!12;CL:0000412!2.50e-30!12;CL:0000182!2.50e-30!12;CL:0000223!5.50e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.24e-42;12!CL:0000047;2.97e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-42,12;CL:0000223,1.54e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.56e-32;11!UBERON:0009497;2.25e-27;13!UBERON:0001041;6.72e-12;30!UBERON:0003104;1.68e-11;31!CL:0000223;9.33e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!2.08e-31!23;UBERON:0002107!3.12e-31!19;UBERON:0006925!3.12e-31!19;UBERON:0008836!3.12e-31!19;UBERON:0009856!1.34e-27!26;UBERON:0005057!1.46e-27!26;UBERON:0008835!8.62e-27!22;UBERON:0003894!8.62e-27!22;UBERON:0007499!2.06e-23!25;UBERON:0009497!2.06e-23!25;UBERON:0000015!2.06e-23!25;UBERON:0002423!2.06e-23!25;UBERON:0006235!2.06e-23!25;UBERON:0004161!2.06e-23!25;UBERON:0002365!1.29e-18!31;UBERON:0002330!1.29e-18!31;UBERON:0005172!1.51e-17!55;UBERON:0005173!1.51e-17!55;UBERON:0002368!2.49e-16!35;UBERON:0002417!1.31e-15!61;UBERON:0000916!1.31e-15!61;UBERON:0000949!2.63e-15!45;UBERON:0003929!4.41e-15!54;UBERON:0004921!9.87e-12!129;UBERON:0004185!9.87e-12!129;UBERON:0002530!3.23e-11!59;UBERON:0005177!1.73e-09!107;UBERON:0005911!2.81e-09!82;UBERON:0001007!2.84e-09!155;UBERON:0001555!2.84e-09!155;UBERON:0007026!2.84e-09!155;UBERON:0001301!9.74e-09!1;UBERON:0000077!1.05e-08!130;UBERON:0002146!1.05e-08!1;UBERON:0005623!1.05e-08!1;UBERON:0001154!1.32e-08!1;UBERON:0001153!1.32e-08!1;UBERON:0004119!2.92e-08!169;UBERON:0000925!2.92e-08!169;UBERON:0006595!2.92e-08!169;UBERON:0001041!1.87e-07!98;UBERON:0009569!1.93e-07!113;UBERON:0005409!6.94e-07!35;UBERON:0004907!8.66e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.56e-47;19!UBERON:0006925;2.56e-47;19!UBERON:0002423;7.55e-36;25!UBERON:0002365;1.01e-27;31!UBERON:0002330;1.01e-27;31!UBERON:0002368;1.87e-24;33!UBERON:0000949;2.08e-21;43!UBERON:0005172;9.85e-11;52!UBERON:0005173;9.85e-11;52!UBERON:0002417;1.98e-09;58!UBERON:0000916;1.98e-09;58!UBERON:0002530;2.50e-09;57!UBERON:0001007;1.30e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.56e-47,19;UBERON:0006925,2.56e-47,19;UBERON:0008836,2.56e-47,19;UBERON:0008835,8.38e-41,22;UBERON:0003894,8.38e-41,22;UBERON:0009854,5.23e-39,23;UBERON:0007499,7.55e-36,25;UBERON:0009497,7.55e-36,25;UBERON:0000015,7.55e-36,25;UBERON:0002423,7.55e-36,25;UBERON:0006235,7.55e-36,25;UBERON:0004161,7.55e-36,25;UBERON:0009856,1.89e-34,26;UBERON:0002365,8.27e-29,31;UBERON:0002330,8.27e-29,31;UBERON:0002368,1.88e-25,35;UBERON:0000949,8.65e-25,45;UBERON:0003929,1.54e-20,54;UBERON:0005172,2.79e-16,54;UBERON:0005173,2.79e-16,54;UBERON:0002530,7.63e-15,59;UBERON:0002417,1.38e-14,60;UBERON:0000916,1.38e-14,60;UBERON:0005911,3.07e-13,82;UBERON:0005177,1.42e-10,101;UBERON:0001041,7.76e-10,87;UBERON:0004921,7.76e-09,118;UBERON:0009569,1.81e-07,112;UBERON:0003914,4.08e-07,117;UBERON:0001007,5.07e-07,145;UBERON:0001555,5.07e-07,145;UBERON:0007026,5.07e-07,145;UBERON:0000490,6.50e-07,148;UBERON:0005256,8.62e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,226.891512331077,93.3685855843745,33.0842347741586,0,4.91953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,58.4242536042585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.6619664427641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,22.0592910460226,26.7027381154979,22.7149942788603,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,122.810771822233,86.1294777929439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68908406739856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@ALB | |||
}} |
Revision as of 11:34, 13 September 2013
Short description: | p7@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -17bp_to_ENST00000504043_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.24e-42 | 12 |
endodermal cell | 1.54e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.56e-47 | 19 |
digestive gland | 2.56e-47 | 19 |
liver bud | 2.56e-47 | 19 |
hepatic diverticulum | 8.38e-41 | 22 |
liver primordium | 8.38e-41 | 22 |
digestive tract diverticulum | 5.23e-39 | 23 |
epithelial sac | 7.55e-36 | 25 |
epithelium of foregut-midgut junction | 7.55e-36 | 25 |
anatomical boundary | 7.55e-36 | 25 |
hepatobiliary system | 7.55e-36 | 25 |
foregut-midgut junction | 7.55e-36 | 25 |
septum transversum | 7.55e-36 | 25 |
sac | 1.89e-34 | 26 |
exocrine gland | 8.27e-29 | 31 |
exocrine system | 8.27e-29 | 31 |
endocrine gland | 1.88e-25 | 35 |
endocrine system | 8.65e-25 | 45 |
gut epithelium | 1.54e-20 | 54 |
abdomen element | 2.79e-16 | 54 |
abdominal segment element | 2.79e-16 | 54 |
gland | 7.63e-15 | 59 |
abdominal segment of trunk | 1.38e-14 | 60 |
abdomen | 1.38e-14 | 60 |
endo-epithelium | 3.07e-13 | 82 |
trunk region element | 1.42e-10 | 101 |
foregut | 7.76e-10 | 87 |
subdivision of digestive tract | 7.76e-09 | 118 |
subdivision of trunk | 1.81e-07 | 112 |
epithelial tube | 4.08e-07 | 117 |
digestive system | 5.07e-07 | 145 |
digestive tract | 5.07e-07 | 145 |
primitive gut | 5.07e-07 | 145 |
unilaminar epithelium | 6.50e-07 | 148 |
trunk mesenchyme | 8.62e-07 | 122 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.