FFCP PHASE1:Hg19::chr4:46995726..46995765,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2560|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4081|TSSclassifier=S|UniProt=D6REM0|association_with_transcript=0bp_to_ENST00000513567_5end|coexpression_cluster_id=C3|description=CAGE_peak_5_at_GABRB1_5end|id=chr4:46995726..46995765,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;1.04e-14;2!UBERON:0006601;8.22e-13;82!UBERON:0004140;8.68e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.79e-73!57;UBERON:0005068!2.79e-73!57;UBERON:0006241!2.79e-73!57;UBERON:0007135!2.79e-73!57;UBERON:0001869!1.73e-70!32;UBERON:0002780!1.76e-70!41;UBERON:0001890!1.76e-70!41;UBERON:0006240!1.76e-70!41;UBERON:0003080!1.25e-68!42;UBERON:0001893!5.42e-66!34;UBERON:0002020!1.21e-65!34;UBERON:0003528!1.21e-65!34;UBERON:0002791!3.68e-63!33;UBERON:0002616!5.32e-63!59;UBERON:0001017!1.07e-58!82;UBERON:0005743!3.28e-58!86;UBERON:0000955!5.17e-58!69;UBERON:0006238!5.17e-58!69;UBERON:0002619!2.33e-57!22;UBERON:0000073!2.07e-54!94;UBERON:0001016!2.07e-54!94;UBERON:0003075!3.81e-53!86;UBERON:0007284!3.81e-53!86;UBERON:0002346!4.64e-53!90;UBERON:0001950!1.86e-51!20;UBERON:0000956!4.89e-50!25;UBERON:0000203!4.89e-50!25;UBERON:0003056!1.20e-47!61;UBERON:0007023!1.75e-39!115;UBERON:0000033!8.29e-34!123;UBERON:0000153!9.42e-32!129;UBERON:0007811!9.42e-32!129;UBERON:0000924!1.24e-27!173;UBERON:0006601!1.24e-27!173;UBERON:0004121!4.98e-27!169;UBERON:0002420!2.66e-22!9;UBERON:0007245!2.66e-22!9;UBERON:0010009!2.66e-22!9;UBERON:0010011!2.66e-22!9;UBERON:0000454!2.66e-22!9;UBERON:0000200!1.66e-19!6;UBERON:0001871!5.30e-19!7;UBERON:0002308!1.14e-16!9;UBERON:0000125!1.14e-16!9;UBERON:0000025!1.34e-16!194;UBERON:0000349!1.46e-16!5;UBERON:0009663!1.77e-16!7;UBERON:0001872!3.18e-16!5;UBERON:0000369!7.46e-14!4;UBERON:0002435!7.46e-14!4;UBERON:0000204!7.46e-14!4;UBERON:0010082!7.46e-14!4;UBERON:0004111!3.30e-12!241;UBERON:0000064!8.00e-11!219;UBERON:0005383!9.11e-11!3;UBERON:0005382!9.11e-11!3;UBERON:0002021!1.34e-10!5;UBERON:0002771!1.38e-10!3;UBERON:0000477!3.84e-10!286;UBERON:0000483!3.37e-09!309;UBERON:0000119!5.20e-09!312;UBERON:0003076!1.46e-08!15;UBERON:0003057!1.46e-08!15;UBERON:0001870!6.48e-08!2;UBERON:0001873!9.87e-08!2;UBERON:0010122!9.87e-08!2;UBERON:0001876!1.24e-07!2;UBERON:0001954!1.59e-07!2;UBERON:0003022!1.59e-07!2;UBERON:0002421!1.59e-07!2;UBERON:0002600!1.59e-07!2;UBERON:0001875!3.27e-07!2;UBERON:0006514!3.27e-07!2;UBERON:0001894!6.37e-07!7;UBERON:0006222!6.37e-07!7;UBERON:0000007!7.01e-07!2;UBERON:0002360!8.14e-07!2;UBERON:0000094!8.14e-07!2;UBERON:0007645!8.14e-07!2;UBERON:0000475!9.30e-07!365|ontology_enrichment_uberon_v019=UBERON:0001869;4.07e-108;32!UBERON:0002619;2.72e-101;22!UBERON:0002791;1.55e-100;32!UBERON:0001893;7.50e-96;34!UBERON:0003528;4.03e-95;34!UBERON:0002020;4.03e-95;34!UBERON:0000956;3.42e-89;25!UBERON:0000203;3.42e-89;25!UBERON:0001950;8.94e-89;20!UBERON:0002780;4.83e-65;41!UBERON:0001890;4.83e-65;41!UBERON:0000200;7.22e-40;6!UBERON:0000073;3.58e-38;53!UBERON:0002616;3.58e-38;53!UBERON:0002420;2.78e-36;9!UBERON:0007245;2.78e-36;9!UBERON:0010009;2.78e-36;9!UBERON:0010011;2.78e-36;9!UBERON:0000454;2.78e-36;9!UBERON:0000349;1.21e-33;5!UBERON:0000369;6.90e-28;4!UBERON:0002435;6.90e-28;4!UBERON:0000204;6.90e-28;4!UBERON:0000955;1.71e-26;68!UBERON:0001017;2.65e-25;75!UBERON:0009663;2.07e-24;7!UBERON:0001871;1.24e-23;6!UBERON:0001872;6.13e-22;5!UBERON:0001870;1.82e-21;3!UBERON:0005383;2.65e-21;3!UBERON:0005382;2.65e-21;3!UBERON:0002021;2.74e-21;5!UBERON:0000125;5.85e-19;9!UBERON:0002308;5.85e-19;9!UBERON:0001016;1.02e-18;83!UBERON:0002702;7.14e-15;2!UBERON:0001873;1.04e-14;2!UBERON:0002771;1.99e-14;2!UBERON:0001876;1.99e-14;2!UBERON:0001954;1.99e-14;2!UBERON:0003022;1.99e-14;2!UBERON:0002421;1.99e-14;2!UBERON:0002600;1.99e-14;2!UBERON:0007023;1.89e-11;114!UBERON:0011216;4.18e-09;132!UBERON:0001882;2.44e-08;1!UBERON:0002022;2.44e-08;1!UBERON:0001874;2.44e-08;1!UBERON:0003112;2.44e-08;1!UBERON:0011158;2.44e-08;1!UBERON:0003128;2.44e-08;1!UBERON:0005403;2.44e-08;1!UBERON:0001703;2.44e-08;1!UBERON:0002241;2.44e-08;1!UBERON:0010314;4.42e-08;132!UBERON:0002581;4.55e-08;1!UBERON:0002902;4.55e-08;1!UBERON:0009899;4.55e-08;1!UBERON:0007190;8.68e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.22e-122,32;UBERON:0001893,2.18e-115,34;UBERON:0002791,5.78e-113,32;UBERON:0003528,2.86e-106,34;UBERON:0002020,2.86e-106,34;UBERON:0002619,2.59e-101,22;UBERON:0002780,1.94e-95,41;UBERON:0001890,1.94e-95,41;UBERON:0003080,1.94e-95,41;UBERON:0006240,1.94e-95,41;UBERON:0000956,3.28e-89,25;UBERON:0000203,3.28e-89,25;UBERON:0001950,7.04e-89,20;UBERON:0000073,2.90e-73,53;UBERON:0002616,2.90e-73,53;UBERON:0001049,3.54e-69,56;UBERON:0005068,3.54e-69,56;UBERON:0006241,3.54e-69,56;UBERON:0007135,3.54e-69,56;UBERON:0003056,3.04e-63,61;UBERON:0000955,3.72e-60,68;UBERON:000623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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2560 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4081 | |||
|TSSclassifier=S | |||
|UniProt=D6REM0 | |||
|association_with_transcript=0bp_to_ENST00000513567_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_GABRB1_5end | |||
|id=chr4:46995726..46995765,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.04e-14;2!UBERON:0006601;8.22e-13;82!UBERON:0004140;8.68e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@GABRB1 | |||
}} |
Revision as of 11:01, 13 September 2013
Short description: | p5@GABRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GABRB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000513567_5end |
EntrezGene: | GABRB1 |
HGNC: | 4081 |
UniProt: | D6REM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.